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Results for MligTC455_46929

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_46929 325 6.77 Mlig455_050152

Neo: -

Age: Down-Up-Up

 SLC25A28 Mlig455_050152 {REF} {Length: 3037} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=199.1]} {Human: ENSG00000155287, SLC25A28, solute carrier family 25 member 28, [RH, Score=305, Expect=4e-102]} {Mouse: ENSMUSG00000040414, Slc25a28, solute carrier family 25, member 28, [RH, Score=303, Expect=3e-101]} {Dmel: FBgn0039561, mfrn, mitoferrin, [Score=265, Expect=2e-86]} {Celegans: WBGene00012204, mfn-1, Mitoferrin, [RH, Score=261, Expect=8e-86]} {Smed: dd_Smed_v6_11061_0_1, dd_Smed_v6_11061_0_1, [RH, Score=325, Expect=1e-111]} {RNA1509_13467, RNA1509_46568} {RNA1310_10438, RNA1509_13467, RNA1509_46568} {RNA1509_13467, RNA1509_46568, RNA815_3553.1}

Cumulative graph for MligTC455_46929

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.844 3.348 0.01210 0.31708
RegionR2 2.097 3.348 0.00532 0.06694
RegionR3 1.438 3.348 0.02664 0.27825
RegionR4 0.337 3.348 0.69015 0.98187
RegionR5 0.999 3.348 0.15704 0.41582
RegionR6 1.132 3.348 0.12815 0.64846
RegionR7 0.608 3.348 0.54442 1.00000
RegionR8 1.233 3.348 0.23544 0.85083

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.215 3.348 0.99976 1.00000
RegenerationR2 -0.877 3.348 0.07469 0.44184
RegenerationR3 0.368 3.348 0.43278 0.82279
RegenerationR4 0.084 3.348 0.85717 1.00000
RegenerationR5 0.74 3.348 0.07153 0.41996
RegenerationR6 0.537 3.348 0.28754 0.63753
RegenerationBL -0.195 3.348 0.80899 1.00000
RegenerationTP 0.888 3.348 0.20174 0.64354


Genes with expression patterns similar to MligTC455_46929

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_46929 325 6.77 Mlig455_050152

Neo: -

Age: Down-Up-Up

 SLC25A28 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_050152 {REF} {Length: 3037} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=199.1]} {Human: ENSG00000155287, SLC25A28, solute carrier family 25 member 28, [RH, Score=305, Expect=4e-102]} {Mouse: ENSMUSG00000040414, Slc25a28, solute carrier family 25, member 28, [RH, Score=303, Expect=3e-101]} {Dmel: FBgn0039561, mfrn, mitoferrin, [Score=265, Expect=2e-86]} {Celegans: WBGene00012204, mfn-1, Mitoferrin, [RH, Score=261, Expect=8e-86]} {Smed: dd_Smed_v6_11061_0_1, dd_Smed_v6_11061_0_1, [RH, Score=325, Expect=1e-111]} {RNA1509_13467, RNA1509_46568} {RNA1310_10438, RNA1509_13467, RNA1509_46568} {RNA1509_13467, RNA1509_46568, RNA815_3553.1}
2. MligTC455_17291 231 4.82 Mlig455_011878

Neo: -

Age: -

Region-enriched R4: 2.590/0.00761

 TRAPPC12 1.725 - - - - 0.981 0.744 Mlig455_011878 {REF} {Length: 4322} {Pfam: Tetratricopeptide repeat [PF14559.8, score=43.8]; Tetratricopeptide repeat [PF07719.19, score=29.5]; Tetratricopeptide repeat [PF13176.8, score=22.9]; Tetratricopeptide repeat [PF13432.8, score=22.5]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=19.5]; Tetratricopeptide repeat [PF13174.8, score=19.3]; Tetratricopeptide repeat [PF13371.8, score=19.1]; Bacterial type III secretion protein (HrpB1_HrpK) [PF09613.12, score=18.6]} {Human: ENSG00000171853, TRAPPC12, trafficking protein particle complex 12, [RH, Score=291, Expect=7e-86]} {Mouse: ENSMUSG00000020628, Trappc12, trafficking protein particle complex 12, [RH, Score=291, Expect=2e-85]} {Dmel: FBgn0037022, CG11396, [RH, Score=182, Expect=2e-49]} {Celegans: WBGene00016614, trpp-12, TRansport Protein Particle, [RH, Score=54.7, Expect=1e-07]} {Smed: dd_Smed_v6_8827_0_1, dd_Smed_v6_8827_0_1, [RH, Score=207, Expect=8e-58]} {RNA1509_35283} {RNA1310_12736.1} {RNA815_19495}
3. MligTC455_36323 204 4.24 Mlig455_013277

Neo: -

Age: logFC(26M/2M)=0.456

 TMC5 1.722 - - - 0.970 - 0.752 Mlig455_013277 {REF} {Length: 3130} {TRANSSPLICED} {Pfam: TMC domain [PF07810.15, score=52.5]} {Human: ENSG00000103534, TMC5, transmembrane channel like 5, [Score=112, Expect=4e-25]} {Mouse: ENSMUSG00000042246, Tmc7, transmembrane channel-like gene family 7, [Score=96.7, Expect=3e-20]; ENSMUSG00000030650, Tmc5, transmembrane channel-like gene family 5, [Score=95.5, Expect=7e-20]} {RNA1509_58030} {RNA1310_8396} {RNA815_832.1}
4. MligTC455_15277 106 2.2 Mlig455_011500

Neo: -

Age: Up-Down-Up

 1.692 - - - 0.963 - 0.729 Mlig455_011500 {REF} {Length: 4662} {RNA1509_54224} {RNA1310_34870} {RNA815_36274}
5. MligTC455_48503 1623 33.8 Mlig455_038159, Mlig455_038264

Neo: -

Age: -

 ERCC2 0.962 - - - - 0.962 -

Mlig455_038159 {REF} {Length: 2889} {Pfam: DEAD_2 [PF06733.17, score=158.5]; Helicase C-terminal domain [PF13307.8, score=148.2]; Helical and beta-bridge domain [PF06777.13, score=128.6]; Type III restriction enzyme, res subunit [PF04851.17, score=24.7]; DEAD/DEAH box helicase [PF00270.31, score=20.9]} {Human: ENSG00000104884, ERCC2, ERCC excision repair 2, TFIIH core complex helicase subunit, [RH, Score=1053, Expect=0.0]} {Mouse: ENSMUSG00000030400, Ercc2, excision repair cross-complementing rodent repair deficiency, complementation group 2, [RH, Score=1048, Expect=0.0]} {Dmel: FBgn0261850, Xpd, Xeroderma pigmentosum D, [RH, Score=1044, Expect=0.0]} {Celegans: WBGene00021752, xpd-1, XPD (Xeroderma Pigmentosum complementation group D) related, [RH, Score=754, Expect=0.0]} {Smed: dd_Smed_v6_8198_0_2, dd_Smed_v6_8198_0_2, [RH, Score=936, Expect=0.0]} {RNA1509_4106, RNA1509_53512} {RNA1310_4020.2, RNA1509_53512} {RNA1509_53512, RNA815_1351.1}

Mlig455_038264 {REF} {Length: 2889} {Pfam: DEAD_2 [PF06733.17, score=158.5]; Helicase C-terminal domain [PF13307.8, score=148.2]; Helical and beta-bridge domain [PF06777.13, score=128.6]; Type III restriction enzyme, res subunit [PF04851.17, score=24.7]; DEAD/DEAH box helicase [PF00270.31, score=20.9]} {Human: ENSG00000104884, ERCC2, ERCC excision repair 2, TFIIH core complex helicase subunit, [RH, Score=1053, Expect=0.0]} {Mouse: ENSMUSG00000030400, Ercc2, excision repair cross-complementing rodent repair deficiency, complementation group 2, [RH, Score=1048, Expect=0.0]} {Dmel: FBgn0261850, Xpd, Xeroderma pigmentosum D, [RH, Score=1044, Expect=0.0]} {Celegans: WBGene00021752, xpd-1, XPD (Xeroderma Pigmentosum complementation group D) related, [RH, Score=754, Expect=0.0]} {Smed: dd_Smed_v6_8198_0_2, dd_Smed_v6_8198_0_2, [RH, Score=936, Expect=0.0]} {RNA1509_4106} {RNA1310_4020.2, RNA1509_4106} {RNA1509_4106, RNA815_1351.1}
6. MligTC455_45592 5516 114.92 Mlig455_026576

Neo: -

Age: -

 VCP 0.961 - - - - 0.961 - Mlig455_026576 {REF} {Length: 3181} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=322.7]; AAA+ lid domain [PF17862.3, score=84.0]; Cell division protein 48 (CDC48), N-terminal domain [PF02359.20, score=76.4]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=51.4]; AAA ATPase domain [PF13191.8, score=46.5]; AAA domain (Cdc48 subfamily) [PF07724.16, score=43.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=40.7]; AAA domain [PF13671.8, score=40.7]; Vps4 C terminal oligomerisation domain [PF09336.12, score=38.2]; AAA domain [PF13401.8, score=38.0]; TIP49 P-loop domain [PF06068.15, score=34.6]; Cell division protein 48 (CDC48), domain 2 [PF02933.19, score=33.3]; AAA domain [PF13238.8, score=31.9]; RNA helicase [PF00910.24, score=29.9]; AAA domain [PF13173.8, score=29.8]; Magnesium chelatase, subunit ChlI [PF01078.23, score=28.7]; IstB-like ATP binding protein [PF01695.19, score=27.6]; ABC transporter [PF00005.29, score=27.3]; AAA domain [PF13521.8, score=27.2]; P-loop containing dynein motor region [PF12775.9, score=25.9]; AAA domain [PF13207.8, score=24.8]; Parvovirus non-structural protein NS1 [PF01057.19, score=24.5]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=22.9]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=22.8]; Bacterial dnaA protein [PF00308.20, score=22.7]; AAA domain [PF13481.8, score=22.7]; ATPase domain predominantly from Archaea [PF01637.20, score=22.5]; KaiC [PF06745.15, score=22.1]; Sigma-54 interaction domain [PF00158.28, score=21.4]; Zeta toxin [PF06414.14, score=21.0]; AAA domain [PF13479.8, score=20.3]; Type III restriction enzyme, res subunit [PF04851.17, score=20.1]; NACHT domain [PF05729.14, score=19.6]; Sigma-54 interaction domain [PF14532.8, score=19.0]; NB-ARC domain [PF00931.24, score=18.8]; PhoH-like protein [PF02562.18, score=18.5]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=18.5]; Protein of unknown function (DUF815) [PF05673.15, score=18.4]; Uncharacterized conserved protein (DUF2075) [PF09848.11, score=18.0]} {Human: ENSG00000165280, VCP, valosin containing protein, [RH, Score=1260, Expect=0.0]} {Mouse: ENSMUSG00000028452, Vcp, valosin containing protein, [RH, Score=1260, Expect=0.0]} {Dmel: FBgn0261014, TER94, [RH, Score=1260, Expect=0.0]} {Celegans: WBGene00008053, cdc-48.2, Transitional endoplasmic reticulum ATPase homolog 2, [RH, Score=1211, Expect=0.0]} {Smed: dd_Smed_v6_482_0_1, dd_Smed_v6_482_0_1, [RH, Score=1303, Expect=0.0]} {RNA1509_10842, RNA1509_45300, RNA1509_47112} {RNA1310_14598.1, RNA1509_45300, RNA1509_47112} {RNA1509_45300, RNA1509_47112, RNA815_1672.1}
7. MligTC455_51815 60 1.25 Mlig455_002796

Neo: -

Age: Down-Down-Up

 ZDHHC17 0.961 - - - 0.961 - - Mlig455_002796 {REF} {Length: 3687} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=123.4]; Ankyrin repeats (many copies) [PF13857.8, score=92.9]; Ankyrin repeats (many copies) [PF13637.8, score=90.4]; DHHC palmitoyltransferase [PF01529.22, score=80.7]; Ankyrin repeat [PF13606.8, score=78.2]; Ankyrin repeat [PF00023.32, score=73.6]} {Human: ENSG00000186908, ZDHHC17, zinc finger DHHC-type containing 17, [Score=160, Expect=3e-41]} {Mouse: ENSMUSG00000035798, Zdhhc17, zinc finger, DHHC domain containing 17, [Score=157, Expect=1e-40]} {Dmel: FBgn0029137, Patsas, [Score=311, Expect=5e-98]} {Celegans: WBGene00019257, dhhc-13, Palmitoyltransferase, [Score=87.0, Expect=9e-18]} {Smed: dd_Smed_v6_16314_0_1, dd_Smed_v6_16314_0_1, [Score=217, Expect=3e-63]} {RNA1509_25007} {RNA1310_9910} {RNA815_13589}
8. MligTC455_45395 1764 36.76 Mlig455_001728, Mlig455_063313

Neo: -

Age: -

 STK19 0.96 - - - - 0.960 -

Mlig455_001728 {REF} {Length: 1572} {RNA1509_14993} {RNA1310_24145} {RNA815_9902.1}

Mlig455_063313 {REF} {Length: 1663} {TRANSSPLICED} {Pfam: Serine-threonine protein kinase 19 [PF10494.11, score=98.7]} {Human: ENSG00000206342, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=2e-34]; ENSG00000236250, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=1e-34]; ENSG00000226257, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=1e-34]; ENSG00000204344, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=3e-34]; ENSG00000226033, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=3e-34]; ENSG00000234947, STK19, serine/threonine kinase 19, [RH, Score=127, Expect=1e-34]} {Mouse: ENSMUSG00000061207, Stk19, serine/threonine kinase 19, [RH, Score=124, Expect=5e-34]} {RNA1509_14993, RNA1509_47033} {RNA1310_24145, RNA1509_14993, RNA1509_47033} {RNA1509_14993, RNA1509_47033, RNA815_9902.1}
9. MligTC455_51555 739 15.39 Mlig455_028099

Neo: Irradiation

Age: -

 0.958 - - - - 0.958 - Mlig455_028099 {REF} {Length: 6184} {TRANSSPLICED} {RNA1509_5476} {RNA1310_1309} {RNA815_4828}
10. MligTC455_51556 736 15.34 Mlig455_045221

Neo: Irradiation

Age: -

 0.955 - - - - 0.955 - Mlig455_045221 {REF} {Length: 4945} {RNA1509_5476} {RNA1310_1309} {RNA815_4828}
11. MligTC455_45472 897 18.69 Mlig455_025381, Mlig455_025432

Neo: Irradiation

Age: -

 RNF11 0.954 - - - 0.954 - -

Mlig455_025381 {REF} {Length: 3329} {Pfam: Ring finger domain [PF13639.8, score=48.5]; RING-like zinc finger [PF17123.7, score=41.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=35.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.4]; RING-type zinc-finger [PF13445.8, score=29.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=29.9]; zinc-RING finger domain [PF14634.8, score=29.5]; RING-H2 zinc finger domain [PF12678.9, score=28.7]; Prokaryotic RING finger family 4 [PF14447.8, score=21.4]} {Human: ENSG00000123091, RNF11, ring finger protein 11, [Score=117, Expect=3e-33]} {Mouse: ENSMUSG00000028557, Rnf11, ring finger protein 11, [Score=117, Expect=2e-33]} {Dmel: FBgn0052850, CG32850, [RH, Score=108, Expect=3e-30]} {Celegans: WBGene00007226, C01G6.4, [RH, Score=92.8, Expect=6e-24]} {Smed: dd_Smed_v6_6913_0_1, dd_Smed_v6_6913_0_1, [Score=110, Expect=4e-30]} {RNA1509_28986} {RNA1310_27389} {RNA815_8062.2}

Mlig455_025432 {REF} {Length: 3400} {Pfam: Ring finger domain [PF13639.8, score=49.6]; RING-like zinc finger [PF17123.7, score=43.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=35.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=32.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=30.5]; RING-type zinc-finger [PF13445.8, score=30.0]; zinc-RING finger domain [PF14634.8, score=29.8]; RING-H2 zinc finger domain [PF12678.9, score=28.8]; Prokaryotic RING finger family 4 [PF14447.8, score=21.6]} {Human: ENSG00000123091, RNF11, ring finger protein 11, [Score=120, Expect=6e-34]} {Mouse: ENSMUSG00000028557, Rnf11, ring finger protein 11, [Score=119, Expect=4e-34]} {Dmel: FBgn0052850, CG32850, [RH, Score=109, Expect=3e-30]} {Celegans: WBGene00007226, C01G6.4, [RH, Score=92.4, Expect=2e-23]} {Smed: dd_Smed_v6_6913_0_1, dd_Smed_v6_6913_0_1, [Score=111, Expect=3e-30]} {RNA1509_15326, RNA1509_17905, RNA1509_41650, RNA1509_56183} {RNA1310_25947, RNA1509_15326, RNA1509_17905, RNA1509_41650, RNA1509_56183} {RNA1509_15326, RNA1509_17905, RNA1509_41650, RNA1509_56183, RNA815_8062.1}
12. MligTC455_40215 1429 29.78 Mlig455_067705

Neo: -

Age: logFC(26M/2M)=2.990

Region-specific R5: 1.938

Region-enriched R5: 1.502/0.00000

 0.952 - - - - 0.952 - Mlig455_067705 {REF} {Length: 1419} {TRANSSPLICED} {Pfam: A49-like RNA polymerase I associated factor [PF06870.14, score=58.1]} {RNA1509_19206} {RNA1310_18855.1} {RNA815_26021.1}
13. MligTC455_13167 699 14.57 Mlig455_018839, Mlig455_018850

Neo: -

Age: -

 PDPR 0.951 - - - 0.951 - -

Mlig455_018839 {REF} {Length: 2007} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=89.9]} {Smed: dd_Smed_v6_4786_0_1, dd_Smed_v6_4786_0_1, [Score=130, Expect=4e-35]} {RNA1509_25789} {RNA1310_15994} {RNA815_21830}

Mlig455_018850 {REF} {Length: 2267} {TRANSSPLICED} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=213.2]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=22.0]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=21.5]; FAD binding domain [PF01494.21, score=20.0]} {Human: ENSG00000090857, PDPR, pyruvate dehydrogenase phosphatase regulatory subunit, [Score=48.9, Expect=9e-06]} {Mouse: ENSMUSG00000033624, Pdpr, pyruvate dehydrogenase phosphatase regulatory subunit, [Score=51.2, Expect=1e-07]} {Smed: dd_Smed_v6_5776_0_1, dd_Smed_v6_5776_0_1, [RH, Score=256, Expect=2e-82]} {RNA1509_25789} {RNA1310_15994, RNA1509_25789} {RNA1509_25789, RNA815_21830}
14. MligTC455_26249 161 3.36 Mlig455_034174

Neo: -

Age: -

Region-enriched R4: 3.683/0.00010

 AFG1L 0.95 - - - - - 0.950 Mlig455_034174 {REF} {Length: 1991} {TRANSSPLICED} {Pfam: AFG1-like ATPase [PF03969.18, score=293.7]} {Human: ENSG00000135537, AFG1L, AFG1 like ATPase, [RH, Score=351, Expect=5e-116]} {Mouse: ENSMUSG00000038302, Afg1l, AFG1 like ATPase, [RH, Score=343, Expect=4e-113]} {Dmel: FBgn0033734, CG8520, [RH, Score=337, Expect=4e-111]} {Celegans: WBGene00016261, C30F12.2, [RH, Score=325, Expect=8e-107]} {Smed: dd_Smed_v6_4382_0_4, dd_Smed_v6_4382_0_4, [RH, Score=325, Expect=5e-107]} {RNA1509_28953} {RNA1310_17455} {RNA815_7977}

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