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Results for MligTC455_47092

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47092 605 12.61 Mlig455_022413

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.333

 DENND4A Mlig455_022413 {REF} {Length: 7653} {TRANSSPLICED} {Pfam: DENN (AEX-3) domain [PF02141.23, score=135.9]; uDENN domain [PF03456.20, score=48.2]; dDENN domain [PF03455.21, score=33.4]; Multivesicular body subunit 12 [PF10240.11, score=27.9]} {Human: ENSG00000174485, DENND4A, DENN domain containing 4A, [RH, Score=518, Expect=2e-153]; ENSG00000137145, DENND4C, DENN domain containing 4C, [RH, Score=515, Expect=5e-152]; ENSG00000198837, DENND4B, DENN domain containing 4B, [RH, Score=493, Expect=2e-149]} {Mouse: ENSMUSG00000053641, Dennd4a, DENN/MADD domain containing 4A, [RH, Score=520, Expect=4e-154]; ENSMUSG00000038024, Dennd4c, DENN/MADD domain containing 4C, [RH, Score=498, Expect=5e-146]} {Dmel: FBgn0025864, Crag, Calmodulin-binding protein related to a Rab3 GDP/GTP exchange protein, [RH, Score=478, Expect=1e-140]} {Celegans: WBGene00018681, denn-4, DENN domain type RAB GEF, [RH, Score=443, Expect=1e-129]} {Smed: dd_Smed_v6_2463_0_1, dd_Smed_v6_2463_0_1, [RH, Score=353, Expect=4e-99]} {RNA1509_30397, RNA1509_54564, RNA1509_55790} {RNA1310_724.1, RNA1509_30397, RNA1509_54564, RNA1509_55790} {RNA1509_30397, RNA1509_54564, RNA1509_55790, RNA815_711}

Cumulative graph for MligTC455_47092

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.977 3.881 0.29185 0.94410
RegionR2 0.467 3.881 0.26698 0.64983
RegionR3 0.048 3.881 0.88453 1.00000
RegionR4 -0.017 3.881 0.96847 1.00000
RegionR5 -0.039 3.881 0.89901 1.00000
RegionR6 -0.412 3.881 0.27037 0.85961
RegionR7 -0.894 3.881 0.15286 0.72432
RegionR8 -0.13 3.881 0.86018 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.815 3.881 0.53252 1.00000
RegenerationR2 -0.1 3.881 0.75435 0.97462
RegenerationR3 0.134 3.881 0.71172 0.95199
RegenerationR4 -0.236 3.881 0.50185 0.87053
RegenerationR5 0.438 3.881 0.16036 0.58364
RegenerationR6 0.903 3.881 0.01794 0.16535
RegenerationBL 1.271 3.881 0.01047 0.10339
RegenerationTP 1.201 3.881 0.03687 0.31976


Genes with expression patterns similar to MligTC455_47092

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47092 605 12.61 Mlig455_022413

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.333

 DENND4A 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_022413 {REF} {Length: 7653} {TRANSSPLICED} {Pfam: DENN (AEX-3) domain [PF02141.23, score=135.9]; uDENN domain [PF03456.20, score=48.2]; dDENN domain [PF03455.21, score=33.4]; Multivesicular body subunit 12 [PF10240.11, score=27.9]} {Human: ENSG00000174485, DENND4A, DENN domain containing 4A, [RH, Score=518, Expect=2e-153]; ENSG00000137145, DENND4C, DENN domain containing 4C, [RH, Score=515, Expect=5e-152]; ENSG00000198837, DENND4B, DENN domain containing 4B, [RH, Score=493, Expect=2e-149]} {Mouse: ENSMUSG00000053641, Dennd4a, DENN/MADD domain containing 4A, [RH, Score=520, Expect=4e-154]; ENSMUSG00000038024, Dennd4c, DENN/MADD domain containing 4C, [RH, Score=498, Expect=5e-146]} {Dmel: FBgn0025864, Crag, Calmodulin-binding protein related to a Rab3 GDP/GTP exchange protein, [RH, Score=478, Expect=1e-140]} {Celegans: WBGene00018681, denn-4, DENN domain type RAB GEF, [RH, Score=443, Expect=1e-129]} {Smed: dd_Smed_v6_2463_0_1, dd_Smed_v6_2463_0_1, [RH, Score=353, Expect=4e-99]} {RNA1509_30397, RNA1509_54564, RNA1509_55790} {RNA1310_724.1, RNA1509_30397, RNA1509_54564, RNA1509_55790} {RNA1509_30397, RNA1509_54564, RNA1509_55790, RNA815_711}
2. MligTC455_45212 287 5.97 Mlig455_023937

Neo: -

Age: -

 TFAP4 1.792 - - 0.950 0.842 - - Mlig455_023937 {REF} {Length: 2526} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=67.6]} {Human: ENSG00000090447, TFAP4, transcription factor AP-4, [RH, Score=90.5, Expect=1e-19]} {Mouse: ENSMUSG00000005718, Tfap4, transcription factor AP4, [RH, Score=90.9, Expect=6e-20]} {Dmel: FBgn0001994, crp, cropped, [RH, Score=92.8, Expect=3e-20]} {Celegans: WBGene00001955, hlh-11, Helix-loop-helix protein 11, [RH, Score=83.2, Expect=3e-17]} {Smed: dd_Smed_v6_8205_0_1, dd_Smed_v6_8205_0_1, [RH, Score=90.9, Expect=2e-20]} {RNA1509_12849, RNA1509_21993} {RNA1310_9423.1, RNA1509_21993} {RNA1509_21993, RNA815_7350.2}
3. MligTC455_29557 797 16.6 Mlig455_040172

Neo: -

Age: logFC(26M/2M)=-0.290

 TMEM67 1.761 0.950 - - - - 0.811 Mlig455_040172 {REF} {Length: 3157} {Pfam: Meckelin (Transmembrane protein 67) [PF09773.11, score=669.0]} {Human: ENSG00000164953, TMEM67, transmembrane protein 67, [Score=437, Expect=1e-140]} {Mouse: ENSMUSG00000049488, Tmem67, transmembrane protein 67, [Score=429, Expect=1e-136]} {Dmel: FBgn0038814, CG15923, [Score=139, Expect=9e-34]} {Celegans: WBGene00018042, mks-3, MecKel-Gruber Syndrome (MKS) homolog, [Score=278, Expect=2e-81]} {Smed: dd_Smed_v6_7765_0_1, dd_Smed_v6_7765_0_1, [Score=476, Expect=9e-156]} {RNA1509_26795, RNA1509_3205, RNA1509_40554} {RNA1310_2827.1, RNA1509_26795, RNA1509_40554} {RNA1509_26795, RNA1509_40554, RNA815_833}
4. MligTC455_39440 1122 23.36 Mlig455_018887

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.697

 GGA1 0.973 - - - 0.973 - - Mlig455_018887 {REF} {Length: 3456} {Pfam: VHS domain [PF00790.21, score=117.5]; GAT domain [PF03127.16, score=56.7]; N-terminal extension of GAT domain [PF18308.3, score=54.8]} {Human: ENSG00000100083, GGA1, golgi associated, gamma adaptin ear containing, ARF binding protein 1, [RH, Score=290, Expect=2e-87]; ENSG00000125447, GGA3, golgi associated, gamma adaptin ear containing, ARF binding protein 3, [RH, Score=283, Expect=4e-84]} {Mouse: ENSMUSG00000020740, Gga3, golgi associated, gamma adaptin ear containing, ARF binding protein 3, [RH, Score=292, Expect=1e-88]; ENSMUSG00000033128, Gga1, golgi associated, gamma adaptin ear containing, ARF binding protein 1, [RH, Score=287, Expect=6e-87]} {Dmel: FBgn0030141, Gga, Golgi-localized, gamma-adaptin ear containing, ARF binding protein, [RH, Score=134, Expect=2e-32]} {Celegans: WBGene00000166, apt-9, AdaPTin or adaptin-related protein, [RH, Score=125, Expect=7e-30]} {Smed: dd_Smed_v6_4823_0_1, dd_Smed_v6_4823_0_1, [RH, Score=302, Expect=3e-92]} {RNA1509_2954} {RNA1310_3894.1} {RNA815_4766.1}
5. MligTC455_51658 123 2.56 Mlig455_028791

Neo: -

Age: Down-Up-Down

 0.963 - - - - - 0.963 Mlig455_028791 {REF} {Length: 2943} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=22.8]} {RNA1509_58492} {RNA1310_6222.1, RNA1509_58492} {RNA1509_58492, RNA815_11096}
6. MligTC455_53601 467 9.73 Mlig455_013871, Mlig455_057739

Neo: Irradiation

Age: -

Region-enriched R5: 1.994/0.00213

 0.958 - - - 0.958 - -

Mlig455_013871 {REF} {Length: 1802} {TRANSSPLICED} {RNA1509_31579, RNA1509_31889} {RNA1310_30174, RNA1509_31579, RNA1509_31889} {RNA1509_31579, RNA1509_31889, RNA815_21842.1}

Mlig455_057739 {REF} {Length: 1793} {TRANSSPLICED} {RNA1509_31579} {RNA1310_30174} {RNA815_21842.1}
7. MligTC455_33271 455 9.47 Mlig455_062589

Neo: -

Age: -

 SLC35A2 0.953 - - - - - 0.953 Mlig455_062589 {REF} {Length: 5859} {TRANSSPLICED} {Pfam: Nucleotide-sugar transporter [PF04142.17, score=381.6]; EamA-like transporter family [PF00892.22, score=29.7]; UAA transporter family [PF08449.13, score=27.9]} {Human: ENSG00000102100, SLC35A2, solute carrier family 35 member A2, [RH, Score=287, Expect=2e-93]; ENSG00000164414, SLC35A1, solute carrier family 35 member A1, [RH, Score=284, Expect=2e-93]} {Mouse: ENSMUSG00000031156, Slc35a2, solute carrier family 35 (UDP-galactose transporter), member A2, [RH, Score=284, Expect=6e-93]; ENSMUSG00000028293, Slc35a1, solute carrier family 35 (CMP-sialic acid transporter), member 1, [RH, Score=277, Expect=4e-91]} {Dmel: FBgn0024994, Csat, [RH, Score=303, Expect=4e-101]} {Celegans: WBGene00005153, srf-3, UDP-galactose/UDP-N-acetylglucosamine transporter srf-3, [RH, Score=241, Expect=9e-77]} {Smed: dd_Smed_v6_4691_0_1, dd_Smed_v6_4691_0_1, [RH, Score=324, Expect=9e-110]} {RNA1509_20257, RNA1509_31911, RNA1509_54503, RNA1509_56118} {RNA1310_27382, RNA1509_31911, RNA1509_54503, RNA1509_56118} {RNA1509_31911, RNA1509_54503, RNA1509_56118, RNA815_5729}
8. MligTC455_50508 947 19.73 Mlig455_067809

Neo: -

Age: Down-Up-Up

 UBE2Z 0.951 0.951 - - - - - Mlig455_067809 {REF} {Length: 1426} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=80.1]} {Human: ENSG00000159202, UBE2Z, ubiquitin conjugating enzyme E2 Z, [Score=124, Expect=2e-32]} {Mouse: ENSMUSG00000014349, Ube2z, ubiquitin-conjugating enzyme E2Z, [Score=124, Expect=1e-32]} {Dmel: FBgn0266717, Bruce, BIR repeat containing ubiquitin-conjugating enzyme, [Score=75.1, Expect=1e-14]} {Celegans: WBGene00006712, ubc-17, Probable ubiquitin-conjugating enzyme protein 17, [Score=83.2, Expect=1e-17]} {Smed: dd_Smed_v6_2721_0_1, dd_Smed_v6_2721_0_1, [Score=127, Expect=6e-35]} {RNA1509_23001} {RNA1310_23166.1} {RNA815_9851.1}
9. MligTC455_53603 211 4.39 Mlig455_070647

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.345

 HOOK3 0.951 - - - 0.951 - - Mlig455_070647 {REF} {Length: 2917} {Pfam: HOOK protein coiled-coil region [PF05622.14, score=280.3]; HOOK domain [PF19047.2, score=193.1]} {Human: ENSG00000168172, HOOK3, hook microtubule tethering protein 3, [RH, Score=384, Expect=1e-123]} {Mouse: ENSMUSG00000037234, Hook3, hook microtubule tethering protein 3, [RH, Score=377, Expect=4e-121]} {Dmel: FBgn0001202, hook, [RH, Score=257, Expect=4e-76]} {Smed: dd_Smed_v6_8306_0_1, dd_Smed_v6_8306_0_1, [RH, Score=243, Expect=2e-70]} {RNA1509_4937} {RNA1310_7268} {RNA815_3630.1}

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