Data search
Results for MligTC455_47105
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47105 | 59 | 1.24 | Mlig455_037822 | Neo: - Age: Down-Up-Down |
LRCH3 | Mlig455_037822 {REF} {Length: 2308} {Pfam: Calponin homology (CH) domain [PF00307.33, score=35.3]; Leucine rich repeat [PF13855.8, score=24.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=24.2]} {Human: ENSG00000186001, LRCH3, leucine rich repeats and calponin homology domain containing 3, [RH, Score=93.6, Expect=9e-20]} {Mouse: ENSMUSG00000022801, Lrch3, leucine-rich repeats and calponin homology (CH) domain containing 3, [RH, Score=92.4, Expect=1e-19]} {Dmel: FBgn0032633, Lrch, Leucine-rich-repeats and calponin homology domain protein, [Score=89.7, Expect=8e-19]} {Celegans: WBGene00015779, lrch-1, Leucine-rich Repeats (LRR) and Calponin Homology (CH) domain homolog, [Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_12270_0_1, dd_Smed_v6_12270_0_1, [Score=93.6, Expect=3e-20]} {RNA1509_10681} {RNA1310_4311} {RNA815_2362} |
Cumulative graph for MligTC455_47105
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.737 | 1.606 | 0.99961 | 1.00000 | |
| RegionR2 | 1.041 | 1.606 | 0.45641 | 0.84416 | |
| RegionR3 | 0.234 | 1.606 | 0.68892 | 1.00000 | |
| RegionR4 | 0.681 | 1.606 | 0.52820 | 0.85241 | |
| RegionR5 | 1.249 | 1.606 | 0.24404 | 0.55705 | |
| RegionR6 | 0.346 | 1.606 | 0.65549 | 1.00000 | |
| RegionR7 | -2.562 | 1.606 | 1.00000 | 1.00000 | |
| RegionR8 | 1.748 | 1.606 | 0.42018 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.206 | 1.606 | 0.99997 | 1.00000 | |
| RegenerationR2 | 2.088 | 1.606 | 0.01293 | 0.18477 | |
| RegenerationR3 | 2.607 | 1.606 | 0.01431 | 0.21912 | |
| RegenerationR4 | 0.849 | 1.606 | 0.41829 | 0.82476 | |
| RegenerationR5 | 1.196 | 1.606 | 0.13495 | 0.54372 | |
| RegenerationR6 | 1.864 | 1.606 | 0.09245 | 0.37836 | |
| RegenerationBL | 2.441 | 1.606 | 0.12756 | 0.42476 | |
| RegenerationTP | 2.142 | 1.606 | 0.29049 | 0.73581 |
Genes with expression patterns similar to MligTC455_47105
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47105 | 59 | 1.24 | Mlig455_037822 | Neo: - Age: Down-Up-Down |
LRCH3 | 4 | - | 1.000 | - | 1.000 | 1.000 | 1.000 | Mlig455_037822 {REF} {Length: 2308} {Pfam: Calponin homology (CH) domain [PF00307.33, score=35.3]; Leucine rich repeat [PF13855.8, score=24.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=24.2]} {Human: ENSG00000186001, LRCH3, leucine rich repeats and calponin homology domain containing 3, [RH, Score=93.6, Expect=9e-20]} {Mouse: ENSMUSG00000022801, Lrch3, leucine-rich repeats and calponin homology (CH) domain containing 3, [RH, Score=92.4, Expect=1e-19]} {Dmel: FBgn0032633, Lrch, Leucine-rich-repeats and calponin homology domain protein, [Score=89.7, Expect=8e-19]} {Celegans: WBGene00015779, lrch-1, Leucine-rich Repeats (LRR) and Calponin Homology (CH) domain homolog, [Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_12270_0_1, dd_Smed_v6_12270_0_1, [Score=93.6, Expect=3e-20]} {RNA1509_10681} {RNA1310_4311} {RNA815_2362} |
| 2. | MligTC455_38113 | 246 | 5.13 | Mlig455_038735, Mlig455_041310, Mlig455_068428 | Neo: - Age: Up-Down-Up |
0.966 | - | - | - | - | 0.966 | - | Mlig455_038735 {REF} {Length: 11183} {RNA1509_26128, RNA1509_47004} {RNA1310_7005.1, RNA1509_26128, RNA1509_47004} {RNA1509_26128, RNA1509_47004, RNA815_23435} Mlig455_041310 {REF} {Length: 2248} {NoTransDecoderORF} {RNA1509_58500} {RNA1310_19542.3, RNA1509_58500} {RNA1509_58500, RNA815_58957} Mlig455_068428 {REF} {Length: 1021} {NoTransDecoderORF} {RNA1509_12775} {RNA1310_27018} {RNA815_50345} |
|
| 3. | MligTC455_23441 | 513 | 10.7 | Mlig455_021694 | Neo: - Age: Up-Down-Down |
MAPKBP1 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_021694 {REF} {Length: 9716} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=97.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=50.5]} {Human: ENSG00000137802, MAPKBP1, mitogen-activated protein kinase binding protein 1, [RH, Score=509, Expect=4e-153]; ENSG00000075702, WDR62, WD repeat domain 62, [RH, Score=502, Expect=2e-150]} {Mouse: ENSMUSG00000033902, Mapkbp1, mitogen-activated protein kinase binding protein 1, [RH, Score=509, Expect=5e-153]; ENSMUSG00000037020, Wdr62, WD repeat domain 62, [RH, Score=501, Expect=3e-150]} {Dmel: FBgn0031374, Wdr62, WD repeat domain 62, [RH, Score=470, Expect=3e-136]} {Celegans: WBGene00019237, H24G06.1, [RH, Score=242, Expect=4e-64]} {Smed: dd_Smed_v6_7818_0_2, dd_Smed_v6_7818_0_2, [RH, Score=545, Expect=1e-165]} {RNA1509_11124, RNA1509_14492} {RNA1310_1098.1, RNA1509_14492} {RNA1509_14492, RNA815_15514} |
| 4. | MligTC455_03720 | 238 | 4.97 | Mlig455_049471 | Neo: Irradiation Age: logFC(26M/2M)=0.202 |
LIMA1 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_049471 {REF} {Length: 5451} {TRANSSPLICED} {Pfam: LIM domain [PF00412.24, score=46.7]} {Human: ENSG00000050405, LIMA1, LIM domain and actin binding 1, [Score=85.5, Expect=1e-16]; ENSG00000163092, XIRP2, xin actin binding repeat containing 2, [Score=85.5, Expect=1e-16]} {Mouse: ENSMUSG00000023022, Lima1, LIM domain and actin binding 1, [RH, Score=84.7, Expect=9e-17]} {Smed: dd_Smed_v6_921_0_1, dd_Smed_v6_921_0_1, [RH, Score=97.8, Expect=1e-21]} {RNA1509_30907} {RNA1310_11285.1} {RNA815_11103} |
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