Data search
Results for MligTC455_47133
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47133 | 537 | 11.19 | Mlig455_000989, Mlig455_037599 | Neo: Int S/G2/M Age: - Regeneration-enriched R6: 2.720 |
CBX3 | Mlig455_000989 {REF} {Length: 2004} {Pfam: Chromo shadow domain [PF01393.21, score=57.4]} {Human: ENSG00000122565, CBX3, chromobox 3, [Score=96.3, Expect=2e-23]; ENSG00000094916, CBX5, chromobox 5, [Score=92.4, Expect=6e-22]} {Mouse: ENSMUSG00000029836, Cbx3, chromobox 3, [Score=96.3, Expect=1e-23]; ENSMUSG00000009575, Cbx5, chromobox 5, [Score=92.0, Expect=6e-22]} {Dmel: FBgn0030082, HP1b, Heterochromatin Protein 1b, [Score=76.6, Expect=5e-16]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=86.3, Expect=7e-20]} {RNA1509_46621} {RNA1310_50589} {RNA815_44911} Mlig455_037599 {REF} {Length: 1824} {TRANSSPLICED} {Pfam: Chromo shadow domain [PF01393.21, score=57.4]} {Human: ENSG00000122565, CBX3, chromobox 3, [Score=96.3, Expect=2e-23]; ENSG00000094916, CBX5, chromobox 5, [Score=92.4, Expect=6e-22]} {Mouse: ENSMUSG00000029836, Cbx3, chromobox 3, [Score=96.3, Expect=1e-23]; ENSMUSG00000009575, Cbx5, chromobox 5, [Score=92.0, Expect=6e-22]} {Dmel: FBgn0030082, HP1b, Heterochromatin Protein 1b, [Score=76.6, Expect=5e-16]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=86.3, Expect=7e-20]} {RNA1509_46621} {RNA1310_50589, RNA1509_46621} {RNA1509_46621, RNA815_44911} |
Cumulative graph for MligTC455_47133
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.298 | 3.907 | 0.10697 | 0.68441 | |
| RegionR2 | 1.239 | 3.907 | 0.16940 | 0.51479 | |
| RegionR3 | 0.867 | 3.907 | 0.31019 | 0.84950 | |
| RegionR4 | 1.838 | 3.907 | 0.01646 | 0.08857 | |
| RegionR5 | 1.625 | 3.907 | 0.01109 | 0.06221 | |
| RegionR6 | 0.253 | 3.907 | 0.73712 | 1.00000 | |
| RegionR7 | 1.033 | 3.907 | 0.27937 | 0.91200 | |
| RegionR8 | -0.556 | 3.907 | 0.96120 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.414 | 3.907 | 0.99995 | 1.00000 | |
| RegenerationR2 | 0.156 | 3.907 | 0.75733 | 0.97578 | |
| RegenerationR3 | 0.611 | 3.907 | 0.28145 | 0.71335 | |
| RegenerationR4 | 0.162 | 3.907 | 0.77354 | 0.97791 | |
| RegenerationR5 | -0.051 | 3.907 | 0.92119 | 1.00000 | |
| RegenerationR6 | 2.72 | 3.907 | 0.00000 | 0.00042 | |
| RegenerationBL | 2.61 | 3.907 | 0.00001 | 0.00074 | |
| RegenerationTP | 1.194 | 3.907 | 0.12174 | 0.53066 |
Genes with expression patterns similar to MligTC455_47133
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47133 | 537 | 11.19 | Mlig455_000989, Mlig455_037599 | Neo: Int S/G2/M Age: - Regeneration-enriched R6: 2.720 |
CBX3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_000989 {REF} {Length: 2004} {Pfam: Chromo shadow domain [PF01393.21, score=57.4]} {Human: ENSG00000122565, CBX3, chromobox 3, [Score=96.3, Expect=2e-23]; ENSG00000094916, CBX5, chromobox 5, [Score=92.4, Expect=6e-22]} {Mouse: ENSMUSG00000029836, Cbx3, chromobox 3, [Score=96.3, Expect=1e-23]; ENSMUSG00000009575, Cbx5, chromobox 5, [Score=92.0, Expect=6e-22]} {Dmel: FBgn0030082, HP1b, Heterochromatin Protein 1b, [Score=76.6, Expect=5e-16]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=86.3, Expect=7e-20]} {RNA1509_46621} {RNA1310_50589} {RNA815_44911} Mlig455_037599 {REF} {Length: 1824} {TRANSSPLICED} {Pfam: Chromo shadow domain [PF01393.21, score=57.4]} {Human: ENSG00000122565, CBX3, chromobox 3, [Score=96.3, Expect=2e-23]; ENSG00000094916, CBX5, chromobox 5, [Score=92.4, Expect=6e-22]} {Mouse: ENSMUSG00000029836, Cbx3, chromobox 3, [Score=96.3, Expect=1e-23]; ENSMUSG00000009575, Cbx5, chromobox 5, [Score=92.0, Expect=6e-22]} {Dmel: FBgn0030082, HP1b, Heterochromatin Protein 1b, [Score=76.6, Expect=5e-16]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=86.3, Expect=7e-20]} {RNA1509_46621} {RNA1310_50589, RNA1509_46621} {RNA1509_46621, RNA815_44911} |
| 2. | MligTC455_38135 | 818 | 17.04 | Mlig455_029961, Mlig455_067217 | Neo: Int S/G2/M Age: - |
TADA3 | 1.804 | - | - | - | 0.951 | - | 0.853 | Mlig455_029961 {REF} {Length: 3384} {Pfam: Histone acetyltransferases subunit 3 [PF10198.11, score=53.4]} {Human: ENSG00000171148, TADA3, transcriptional adaptor 3, [RH, Score=81.6, Expect=8e-16]} {Mouse: ENSMUSG00000048930, Tada3, transcriptional adaptor 3, [RH, Score=81.6, Expect=6e-16]} {Smed: dd_Smed_v6_6207_0_1, dd_Smed_v6_6207_0_1, [RH, Score=176, Expect=6e-48]} {RNA1509_16946} {RNA1310_9965} {RNA815_19793} Mlig455_067217 {REF} {Length: 2923} {TRANSSPLICED} {Pfam: Histone acetyltransferases subunit 3 [PF10198.11, score=53.4]} {Human: ENSG00000171148, TADA3, transcriptional adaptor 3, [RH, Score=81.6, Expect=8e-16]} {Mouse: ENSMUSG00000048930, Tada3, transcriptional adaptor 3, [RH, Score=81.6, Expect=6e-16]} {Smed: dd_Smed_v6_6207_0_1, dd_Smed_v6_6207_0_1, [RH, Score=176, Expect=6e-48]} {RNA1509_16946} {RNA1310_9965} {RNA815_19793} |
| 3. | MligTC455_25233 | 925 | 19.27 | Mlig455_002798, Mlig455_002812 | Neo: Irradiation Age: - |
CDC25B | 1.726 | - | - | - | 0.965 | 0.761 | - | Mlig455_002798 {REF} {Length: 2234} {Pfam: Rhodanese-like domain [PF00581.22, score=42.3]} {Human: ENSG00000101224, CDC25B, cell division cycle 25B, [RH, Score=165, Expect=1e-44]} {Mouse: ENSMUSG00000027330, Cdc25b, cell division cycle 25B, [Score=160, Expect=9e-43]; ENSMUSG00000032477, Cdc25a, cell division cycle 25A, [Score=155, Expect=2e-41]} {Dmel: FBgn0003525, stg, string, [RH, Score=193, Expect=1e-55]} {Celegans: WBGene00000389, cdc-25.4, Cell Division Cycle related, [RH, Score=103, Expect=1e-24]} {Smed: dd_Smed_v6_7176_0_2, dd_Smed_v6_7176_0_2, [RH, Score=113, Expect=6e-27]} {RNA1509_22510} {RNA1310_11197} {RNA815_20308} Mlig455_002812 {REF} {Length: 2309} {Pfam: Rhodanese-like domain [PF00581.22, score=41.9]} {Human: ENSG00000101224, CDC25B, cell division cycle 25B, [RH, Score=164, Expect=4e-44]} {Mouse: ENSMUSG00000027330, Cdc25b, cell division cycle 25B, [Score=159, Expect=3e-42]; ENSMUSG00000032477, Cdc25a, cell division cycle 25A, [Score=155, Expect=4e-41]} {Dmel: FBgn0003525, stg, string, [RH, Score=191, Expect=7e-55]} {Celegans: WBGene00000389, cdc-25.4, Cell Division Cycle related, [RH, Score=103, Expect=2e-24]} {Smed: dd_Smed_v6_7858_0_3, dd_Smed_v6_7858_0_3, [Score=116, Expect=7e-28]} {RNA1509_22510} {RNA1310_11197} {RNA815_20308} |
| 4. | MligTC455_15862 | 258 | 5.37 | Mlig455_034676, Mlig455_067579 | Neo: - Age: - |
0.962 | - | - | - | 0.962 | - | - | Mlig455_034676 {REF} {Length: 2637} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=143.0]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [Score=53.1, Expect=4e-07]} {Smed: dd_Smed_v6_15920_0_1, dd_Smed_v6_15920_0_1, [RH, Score=286, Expect=3e-90]} {RNA1509_34117} {RNA1310_14316, RNA1509_34117} {RNA1509_34117, RNA815_5722} Mlig455_067579 {REF} {Length: 2695} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=143.0]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [Score=53.1, Expect=4e-07]} {Smed: dd_Smed_v6_15920_0_1, dd_Smed_v6_15920_0_1, [Score=286, Expect=5e-90]} {RNA1509_34117} {RNA1310_14316} {RNA815_5722} |
|
| 5. | MligTC455_28659 | 416 | 8.67 | Mlig455_024182 | Neo: - Age: Up-Down-Down |
0.957 | - | - | - | - | - | 0.957 | Mlig455_024182 {REF} {Length: 2105} {RNA1509_38550} {RNA1310_39388.2} {RNA815_16516.1} | |
| 6. | MligTC455_18659 | 114 | 2.39 | Mlig455_021331 | Neo: - Age: - |
0.956 | - | - | - | 0.956 | - | - | Mlig455_021331 {REF} {Length: 1597} {Pfam: Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 [PF03318.15, score=31.6]} {Celegans: WBGene00016289, lntl-1, LIN-24 (Twenty-four) Like, [RH, Score=147, Expect=4e-42]} {RNA1509_6800} {RNA1310_20535, RNA1509_6800} {RNA1509_6800, RNA815_6611.1} | |
| 7. | MligTC455_42829 | 519 | 10.81 | Mlig455_030432, Mlig455_030487 | Neo: Irradiation Age: Up-Down-Down |
LMAN2 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_030432 {REF} {Length: 2270} {Pfam: Legume-like lectin family [PF03388.15, score=194.1]; Bacterial lectin [PF18483.3, score=29.6]} {Human: ENSG00000169223, LMAN2, lectin, mannose binding 2, [Score=204, Expect=8e-62]} {Mouse: ENSMUSG00000021484, Lman2, lectin, mannose-binding 2, [Score=202, Expect=4e-61]} {Dmel: FBgn0039160, CG5510, [Score=195, Expect=5e-59]} {Celegans: WBGene00002071, ile-2, Intracellular LEctin, [Score=197, Expect=7e-60]} {Smed: dd_Smed_v6_2066_0_1, dd_Smed_v6_2066_0_1, [Score=222, Expect=7e-70]} {RNA1509_28503, RNA1509_37977} {RNA1310_16999, RNA1509_37977} {RNA1509_37977, RNA815_6545} Mlig455_030487 {REF} {Length: 2178} {Pfam: Legume-like lectin family [PF03388.15, score=168.0]; Bacterial lectin [PF18483.3, score=27.5]} {Human: ENSG00000169223, LMAN2, lectin, mannose binding 2, [Score=167, Expect=9e-48]} {Mouse: ENSMUSG00000021484, Lman2, lectin, mannose-binding 2, [Score=164, Expect=5e-47]} {Dmel: FBgn0039160, CG5510, [Score=158, Expect=5e-45]} {Celegans: WBGene00002071, ile-2, Intracellular LEctin, [Score=164, Expect=3e-47]} {Smed: dd_Smed_v6_2066_0_1, dd_Smed_v6_2066_0_1, [Score=183, Expect=5e-55]} {RNA1509_28503, RNA1509_44543} {RNA1310_16999, RNA1509_44543} {RNA1509_44543, RNA815_6545} |
| 8. | MligTC455_25442 | 204 | 4.26 | Mlig455_061219 | Neo: - Age: - Region-enriched R4: 4.002/0.02628 |
PHAX | 0.953 | - | - | - | - | - | 0.953 | Mlig455_061219 {REF} {Length: 2493} {TRANSSPLICED} {Pfam: PHAX RNA-binding domain [PF10258.11, score=89.7]} {Human: ENSG00000164902, PHAX, phosphorylated adaptor for RNA export, [RH, Score=81.6, Expect=2e-16]} {Mouse: ENSMUSG00000008301, Phax, phosphorylated adaptor for RNA export, [RH, Score=90.9, Expect=7e-20]} {Dmel: FBgn0033380, Phax, Phosphorylated adaptor for RNA export, [RH, Score=81.6, Expect=1e-16]} {Celegans: WBGene00022192, Y71H2B.2, [RH, Score=66.2, Expect=8e-12]} {Smed: dd_Smed_v6_11764_0_1, dd_Smed_v6_11764_0_1, [RH, Score=71.2, Expect=1e-13]} {RNA1509_37657} {RNA1310_20984, RNA1509_37657} {RNA1509_37657, RNA815_8657.2} |
| 9. | MligTC455_40676 | 1450 | 30.21 | Mlig455_006182 | Neo: - Age: logFC(26M/2M)=0.222 Region-specific R5: 1.802 Region-enriched R2: 1.353/0.01437 Regeneration-enriched R6: 2.643 |
RBPMS | 0.953 | - | - | - | - | 0.953 | - | Mlig455_006182 {REF} {Length: 2372} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=50.9]} {Human: ENSG00000157110, RBPMS, RNA binding protein, mRNA processing factor, [RH, Score=134, Expect=2e-37]} {Mouse: ENSMUSG00000031586, Rbpms, RNA binding protein gene with multiple splicing, [RH, Score=131, Expect=1e-36]; ENSMUSG00000032387, Rbpms2, RNA binding protein with multiple splicing 2, [RH, Score=129, Expect=1e-35]} {Dmel: FBgn0263995, cpo, couch potato, [Score=186, Expect=6e-54]} {Celegans: WBGene00003172, mec-8, Mec-8 protein, [RH, Score=149, Expect=2e-42]} {Smed: dd_Smed_v6_4296_0_3, dd_Smed_v6_4296_0_3, [RH, Score=165, Expect=1e-48]} {RNA1509_55380} {RNA1310_9719} {RNA815_4041.1} |
| 10. | MligTC455_17699 | 65 | 1.36 | Mlig455_043426 | Neo: - Age: Up-Down-Down |
0.952 | - | - | - | 0.952 | - | - | Mlig455_043426 {REF} {Length: 3824} {RNA1509_38864} {RNA1310_23415, RNA1509_38864} {RNA1509_38864, RNA815_19995} | |
| 11. | MligTC455_28889 | 148 | 3.07 | Mlig455_007222 | Neo: - Age: Down-Down-Up |
CNFN | 0.952 | - | - | - | 0.952 | - | - | Mlig455_007222 {REF} {Length: 9971} {TRANSSPLICED} {Pfam: PLAC8 family [PF04749.19, score=49.2]} {Human: ENSG00000105427, CNFN, cornifelin, [Score=45.1, Expect=4e-06]} {Mouse: ENSMUSG00000063651, Cnfn, cornifelin, [Score=46.6, Expect=9e-07]} {Smed: dd_Smed_v6_865_0_1, dd_Smed_v6_865_0_1, [Score=94.4, Expect=4e-25]} {RNA1509_12352, RNA1509_36973} {RNA1310_2280.1, RNA1509_36973} {RNA1509_36973, RNA815_459.1} |
| 12. | MligTC455_42998 | 572 | 11.92 | Mlig455_034400 | Neo: - Age: - Region-enriched R5: 2.221/0.01821 Regeneration-upregulated BL: 5.235 Regeneration-enriched BL: 5.235 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_034400 {REF} {Length: 1153} {NoTransDecoderORF} {RNA1509_12731} {RNA1310_34600} {RNA815_16012} | |
| 13. | MligTC455_21060 | 340 | 7.09 | Mlig455_070218 | Neo: - Age: - Region-enriched R5: 1.197/0.04030 |
PPAT | 0.951 | - | - | - | - | 0.951 | - | Mlig455_070218 {REF} {Length: 2514} {TRANSSPLICED} {Pfam: Glutamine amidotransferase domain [PF13522.8, score=54.9]; Glutamine amidotransferase domain [PF13537.8, score=51.4]; Phosphoribosyl transferase domain [PF00156.29, score=28.9]; Glutamine amidotransferases class-II [PF13230.8, score=21.9]} {Human: ENSG00000128059, PPAT, phosphoribosyl pyrophosphate amidotransferase, [RH, Score=533, Expect=0.0]} {Mouse: ENSMUSG00000029246, Ppat, phosphoribosyl pyrophosphate amidotransferase, [RH, Score=533, Expect=0.0]} {Dmel: FBgn0041194, Prat2, Phosphoribosylamidotransferase 2, [RH, Score=513, Expect=2e-178]} {Celegans: WBGene00011407, ppat-1, Amidophosphoribosyltransferase, [RH, Score=406, Expect=2e-137]} {Smed: dd_Smed_v6_10667_0_1, dd_Smed_v6_10667_0_1, [RH, Score=518, Expect=0.0]} {RNA1509_21632} {RNA1310_8749, RNA1509_21632} {RNA1509_21632, RNA815_5739} |