TomoSeq data search

Data search

Results for MligTC455_49990

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_49990

5612

116.92

Mlig455_020609

Neo: -

Age: -

RPS16

Mlig455_020609 {REF} {Length: 603} {TRANSSPLICED} {Pfam: Ribosomal protein S9/S16 [PF00380.21, score=111.4]} {Human: ENSG00000105193, RPS16, ribosomal protein S16, [RH, Score=245, Expect=2e-84]} {Mouse: ENSMUSG00000037563, Rps16, ribosomal protein S16, [RH, Score=245, Expect=1e-84]} {Dmel: FBgn0034743, RpS16, Ribosomal protein S16, [RH, Score=243, Expect=8e-84]} {Celegans: WBGene00004485, rps-16, 40S ribosomal protein S16, [RH, Score=218, Expect=3e-74]} {Smed: dd_Smed_v6_170_0_1, dd_Smed_v6_170_0_1, [RH, Score=207, Expect=7e-70]} {RNA1509_2533, RNA1509_4015} {RNA1310_59020.1, RNA1509_2533, RNA1509_4015} {RNA1509_2533, RNA1509_4015, RNA815_30730}

Cumulative graph for MligTC455_49990

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.664	6.991	0.18895	0.82182
RegionR2	-0.374	6.991	0.24305	0.61917
RegionR3	0.263	6.991	0.33051	0.86838
RegionR4	0.738	6.991	0.01488	0.08201
RegionR5	0.448	6.991	0.08587	0.27492
RegionR6	-0.04	6.991	0.88359	1.00000
RegionR7	0.344	6.991	0.21372	0.83016
RegionR8	-0.715	6.991	0.04340	0.40849

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.271	6.991	0.68621	1.00000
RegenerationR2	-0.569	6.991	0.08685	0.47322
RegenerationR3	-0.441	6.991	0.19197	0.62728
RegenerationR4	-0.191	6.991	0.57871	0.90501
RegenerationR5	-0.422	6.991	0.20904	0.64274
RegenerationR6	0.009	6.991	0.97912	1.00000
RegenerationBL	0.194	6.991	0.53434	0.89375
RegenerationTP	0.168	6.991	0.62636	0.97532

Genes with expression patterns similar to MligTC455_49990

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49990	5612	116.92	Mlig455_020609	Neo: - Age: -	RPS16	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_020609 {REF} {Length: 603} {TRANSSPLICED} {Pfam: Ribosomal protein S9/S16 [PF00380.21, score=111.4]} {Human: ENSG00000105193, RPS16, ribosomal protein S16, [RH, Score=245, Expect=2e-84]} {Mouse: ENSMUSG00000037563, Rps16, ribosomal protein S16, [RH, Score=245, Expect=1e-84]} {Dmel: FBgn0034743, RpS16, Ribosomal protein S16, [RH, Score=243, Expect=8e-84]} {Celegans: WBGene00004485, rps-16, 40S ribosomal protein S16, [RH, Score=218, Expect=3e-74]} {Smed: dd_Smed_v6_170_0_1, dd_Smed_v6_170_0_1, [RH, Score=207, Expect=7e-70]} {RNA1509_2533, RNA1509_4015} {RNA1310_59020.1, RNA1509_2533, RNA1509_4015} {RNA1509_2533, RNA1509_4015, RNA815_30730}
2.	MligTC455_49991	5411	112.72	Mlig455_044510	Neo: Int S/G2/M Age: Down-Down-Up, logFC(26M/2M)=0.344	RPS16	5.862	0.974	0.941	0.993	0.994	0.984	0.976	Mlig455_044510 {REF} {Length: 593} {TRANSSPLICED} {Pfam: Ribosomal protein S9/S16 [PF00380.21, score=111.4]} {Human: ENSG00000105193, RPS16, ribosomal protein S16, [RH, Score=245, Expect=2e-84]} {Mouse: ENSMUSG00000037563, Rps16, ribosomal protein S16, [RH, Score=245, Expect=1e-84]} {Dmel: FBgn0034743, RpS16, Ribosomal protein S16, [RH, Score=243, Expect=8e-84]} {Celegans: WBGene00004485, rps-16, 40S ribosomal protein S16, [RH, Score=218, Expect=3e-74]} {Smed: dd_Smed_v6_170_0_1, dd_Smed_v6_170_0_1, [RH, Score=207, Expect=7e-70]} {RNA1509_51406} {RNA1310_59020.2, RNA1509_51406} {RNA1509_51406, RNA815_30730}
3.	MligTC455_27974	8757	182.44	Mlig455_008999	Neo: Int S/G2/M Age: Down-Up-Up	RPS5	2.454	0.715	-	-	0.787	-	0.952	Mlig455_008999 {REF} {Length: 793} {TRANSSPLICED} {Pfam: Ribosomal protein S7p/S5e [PF00177.23, score=121.9]} {Human: ENSG00000083845, RPS5, ribosomal protein S5, [RH, Score=345, Expect=3e-122]} {Mouse: ENSMUSG00000012848, Rps5, ribosomal protein S5, [RH, Score=345, Expect=2e-122]} {Dmel: FBgn0002590, RpS5a, Ribosomal protein S5a, [RH, Score=347, Expect=3e-123]} {Celegans: WBGene00004474, rps-5, 40S ribosomal protein S5, [RH, Score=340, Expect=2e-120]} {Smed: dd_Smed_v6_295_0_1, dd_Smed_v6_295_0_1, [RH, Score=299, Expect=9e-105]} {RNA1509_652} {RNA1310_26040.1} {RNA815_18520.2}
4.	MligTC455_47422	922	19.21	Mlig455_051461	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.112/0.03317	CPSF4	1.844	-	-	-	0.950	-	0.894	Mlig455_051461 {REF} {Length: 1537} {TRANSSPLICED} {Pfam: Zinc finger domain [PF18345.3, score=62.5]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=57.3]; Torus domain [PF16131.7, score=34.2]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=29.9]; CCCH-type zinc finger [PF18044.3, score=29.7]; Zinc-finger containing family [PF15663.7, score=29.2]; Zinc knuckle [PF00098.25, score=20.7]} {Human: ENSG00000160917, CPSF4, cleavage and polyadenylation specific factor 4, [RH, Score=271, Expect=1e-88]} {Mouse: ENSMUSG00000029625, Cpsf4, cleavage and polyadenylation specific factor 4, [RH, Score=271, Expect=1e-88]} {Dmel: FBgn0015621, Clp, Clipper, [RH, Score=249, Expect=7e-80]} {Celegans: WBGene00044329, cpsf-4, Cleavage and Polyadenylation Specificity Factor, [RH, Score=235, Expect=2e-74]} {Smed: dd_Smed_v6_4069_0_1, dd_Smed_v6_4069_0_1, [RH, Score=259, Expect=4e-84]} {RNA1509_31717} {RNA1310_19692.1} {RNA815_8519}
5.	MligTC455_49584	892	18.58	Mlig455_040844	Neo: - Age: - Region-enriched R4: 2.022/0.00004	UBXN1	1.757	-	-	-	0.951	-	0.806	Mlig455_040844 {REF} {Length: 1272} {TRANSSPLICED} {Pfam: UBX domain [PF00789.22, score=53.7]} {Human: ENSG00000162191, UBXN1, UBX domain protein 1, [RH, Score=79.0, Expect=3e-16]} {Mouse: ENSMUSG00000071655, Ubxn1, UBX domain protein 1, [RH, Score=99.8, Expect=6e-24]} {Dmel: FBgn0035830, CG8209, [RH, Score=158, Expect=9e-46]} {Celegans: WBGene00017733, ubxn-1, UBX-containing protein in Nematodes, [RH, Score=153, Expect=2e-44]} {Smed: dd_Smed_v6_3619_0_1, dd_Smed_v6_3619_0_1, [RH, Score=160, Expect=4e-47]} {RNA1509_24118} {RNA1310_26309, RNA1509_24118} {RNA1509_24118, RNA815_23834}
6.	MligTC455_39816	1716	35.75	Mlig455_033778	Neo: - Age: -	G3BP2	1.709	-	-	-	0.733	-	0.976	Mlig455_033778 {REF} {Length: 2268} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=84.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=46.0]; RNA recognition motif [PF16367.7, score=20.2]} {Human: ENSG00000138757, G3BP2, G3BP stress granule assembly factor 2, [RH, Score=130, Expect=1e-32]; ENSG00000145907, G3BP1, G3BP stress granule assembly factor 1, [RH, Score=124, Expect=2e-30]} {Mouse: ENSMUSG00000029405, G3bp2, GTPase activating protein (SH3 domain) binding protein 2, [RH, Score=130, Expect=1e-32]} {Dmel: FBgn0015778, rin, rasputin, [Score=130, Expect=2e-32]} {Celegans: WBGene00010677, gtbp-1, Ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein, [RH, Score=65.5, Expect=3e-11]} {Smed: dd_Smed_v6_316_0_1, dd_Smed_v6_316_0_1, [Score=132, Expect=2e-34]} {RNA1509_3318, RNA1509_44632} {RNA1310_6247, RNA1509_3318, RNA1509_44632} {RNA1509_3318, RNA1509_44632, RNA815_17026}
7.	MligTC455_47540	878	18.3	Mlig455_030761	Neo: Int S/G2/M Age: logFC(26M/2M)=-0.383	PRPF3	0.969	-	-	-	0.969	-	-	Mlig455_030761 {REF} {Length: 2670} {TRANSSPLICED} {Pfam: pre-mRNA processing factor 3 (PRP3) [PF08572.12, score=218.6]} {Human: ENSG00000117360, PRPF3, pre-mRNA processing factor 3, [Score=281, Expect=1e-86]} {Mouse: ENSMUSG00000015748, Prpf3, pre-mRNA processing factor 3, [Score=280, Expect=1e-86]} {Dmel: FBgn0036915, Prp3, Precursor RNA processing 3, [Score=280, Expect=3e-88]} {Celegans: WBGene00010844, prp-3, Yeast PRP (Splicing factor) related, [Score=226, Expect=1e-66]} {Smed: dd_Smed_v6_5417_0_1, dd_Smed_v6_5417_0_1, [Score=247, Expect=3e-76]} {RNA1509_7892} {RNA1310_18508} {RNA815_4827}
8.	MligTC455_44650	7690	160.21	Mlig455_020162	Neo: Neoblast Age: logFC(26M/2M)=0.227 Regeneration-upregulated BL: 1.439 Regeneration-enriched BL: 1.439	CCT8	0.967	-	-	-	0.967	-	-	Mlig455_020162 {REF} {Length: 2162} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=444.6]} {Human: ENSG00000156261, CCT8, chaperonin containing TCP1 subunit 8, [RH, Score=574, Expect=0.0]} {Mouse: ENSMUSG00000025613, Cct8, chaperonin containing Tcp1, subunit 8 (theta), [RH, Score=575, Expect=0.0]} {Dmel: FBgn0284436, CCT8, Chaperonin containing TCP1 subunit 8, [RH, Score=537, Expect=0.0]} {Celegans: WBGene00021934, cct-8, T-complex protein 1 subunit theta, [RH, Score=500, Expect=4e-173]} {Smed: dd_Smed_v6_903_0_1, dd_Smed_v6_903_0_1, [RH, Score=543, Expect=0.0]} {RNA1509_12121, RNA1509_15900, RNA1509_20587, RNA1509_44803, RNA1509_60040, RNA1509_8968, RNA1509_966} {RNA1310_11125.1, RNA1509_12121, RNA1509_15900, RNA1509_20587, RNA1509_44803, RNA1509_60040, RNA1509_8968, RNA1509_966} {RNA1509_12121, RNA1509_15900, RNA1509_20587, RNA1509_44803, RNA1509_60040, RNA1509_8968, RNA1509_966, RNA815_11581}
9.	MligTC455_22466	707	14.72	Mlig455_058979	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.301	CASP2	0.956	-	-	-	0.956	-	-	Mlig455_058979 {REF} {Length: 4652} {Pfam: Caspase domain [PF00656.24, score=84.4]} {Human: ENSG00000106144, CASP2, caspase 2, [Score=57.0, Expect=1e-07]} {Mouse: ENSMUSG00000029863, Casp2, caspase 2, [Score=55.8, Expect=2e-07]} {RNA1509_57931} {RNA1310_10391.1} {RNA815_5832.1}
10.	MligTC455_15698	872	18.16	Mlig455_037340	Neo: Neoblast, stringent Age: - Region-enriched R5: 1.086/0.00578 Regeneration-upregulated BL: 1.971 Regeneration-enriched BL: 1.971	MORC2	0.955	-	-	-	0.955	-	-	Mlig455_037340 {REF} {Length: 4154} {TRANSSPLICED} {Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=81.8]; Morc6 ribosomal protein S5 domain 2-like [PF17942.3, score=78.7]; CW-type Zinc Finger [PF07496.17, score=50.4]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=24.5]} {Human: ENSG00000133422, MORC2, MORC family CW-type zinc finger 2, [RH, Score=667, Expect=0.0]} {Mouse: ENSMUSG00000034543, Morc2a, microrchidia 2A, [RH, Score=661, Expect=0.0]; ENSMUSG00000048602, Morc2b, microrchidia 2B, [RH, Score=644, Expect=0.0]} {Celegans: WBGene00022531, morc-1, MORC (Mouse microrchidia) family CW-type zinc finger protein, [RH, Score=183, Expect=1e-47]} {Smed: dd_Smed_v6_2907_0_1, dd_Smed_v6_2907_0_1, [RH, Score=800, Expect=0.0]} {RNA1509_2813, RNA1509_29140, RNA1509_34261, RNA1509_39979} {RNA1310_3889, RNA1509_2813, RNA1509_29140, RNA1509_34261, RNA1509_39979} {RNA1509_2813, RNA1509_29140, RNA1509_34261, RNA1509_39979, RNA815_1191}
11.	MligTC455_46032	854	17.79	Mlig455_031675	Neo: - Age: Down-Up-Down	TIPRL	0.951	-	-	-	0.951	-	-	Mlig455_031675 {REF} {Length: 1460} {TRANSSPLICED} {Pfam: TIP41-like family [PF04176.15, score=173.2]} {Human: ENSG00000143155, TIPRL, TOR signaling pathway regulator, [RH, Score=177, Expect=6e-54]} {Mouse: ENSMUSG00000040843, Tiprl, TIP41, TOR signalling pathway regulator-like (S. cerevisiae), [RH, Score=179, Expect=7e-55]} {Dmel: FBgn0031094, CG9578, [RH, Score=146, Expect=2e-42]} {Celegans: WBGene00022803, ZK688.9, TIP41-like protein, [RH, Score=134, Expect=7e-38]} {Smed: dd_Smed_v6_8251_0_1, dd_Smed_v6_8251_0_1, [RH, Score=143, Expect=2e-41]} {RNA1509_30710, RNA1509_52249, RNA1509_54198, RNA1509_54645} {RNA1310_33083, RNA1509_30710, RNA1509_52249, RNA1509_54198, RNA1509_54645} {RNA1509_30710, RNA1509_52249, RNA1509_54198, RNA1509_54645, RNA815_14908}
12.	MligTC455_32930	826	17.21	Mlig455_018043	Neo: Int S/G2/M Age: -	SMPD4	0.95	-	-	-	0.950	-	-	Mlig455_018043 {REF} {Length: 2920} {TRANSSPLICED} {Pfam: Mitochondrial-associated sphingomyelin phosphodiesterase [PF14724.8, score=169.3]} {Human: ENSG00000136699, SMPD4, sphingomyelin phosphodiesterase 4, [RH, Score=137, Expect=9e-33]} {Mouse: ENSMUSG00000005899, Smpd4, sphingomyelin phosphodiesterase 4, [RH, Score=140, Expect=1e-33]} {Dmel: FBgn0037958, CG6962, [RH, Score=75.5, Expect=1e-13]} {Smed: dd_Smed_v6_5903_0_1, dd_Smed_v6_5903_0_1, [RH, Score=180, Expect=6e-47]} {RNA1509_13922, RNA1509_41974} {RNA1310_6397.1, RNA1509_13922, RNA1509_41974} {RNA1509_13922, RNA1509_41974, RNA815_9860}

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