Data search
Results for MligTC455_47617
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47617 | 520 | 10.84 | Mlig455_027290 | Neo: - Age: - |
Mlig455_027290 {REF} {Length: 468} {NoTransDecoderORF} {RNA1509_26835} {RNA1310_8654.1, RNA1509_26835} {RNA1509_26835, RNA815_52274} |
Cumulative graph for MligTC455_47617
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.494 | 3.727 | 0.16855 | 0.79362 | |
| RegionR2 | 1.563 | 3.727 | 0.00475 | 0.06207 | |
| RegionR3 | 0.103 | 3.727 | 0.80806 | 1.00000 | |
| RegionR4 | -1.687 | 3.727 | 0.00136 | 0.01321 | |
| RegionR5 | 0.237 | 3.727 | 0.54175 | 0.90430 | |
| RegionR6 | 0.375 | 3.727 | 0.41109 | 0.98030 | |
| RegionR7 | 0.545 | 3.727 | 0.28181 | 0.91495 | |
| RegionR8 | 0.358 | 3.727 | 0.58611 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.561 | 3.727 | 0.41234 | 1.00000 | |
| RegenerationR2 | 0.322 | 3.727 | 0.48527 | 0.86532 | |
| RegenerationR3 | 0.977 | 3.727 | 0.07349 | 0.45321 | |
| RegenerationR4 | 0.887 | 3.727 | 0.11415 | 0.51702 | |
| RegenerationR5 | 0.332 | 3.727 | 0.47951 | 0.84661 | |
| RegenerationR6 | 0.778 | 3.727 | 0.14582 | 0.46789 | |
| RegenerationBL | -0.931 | 3.727 | 0.25562 | 0.61285 | |
| RegenerationTP | 0.76 | 3.727 | 0.23300 | 0.67832 |
Genes with expression patterns similar to MligTC455_47617
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47617 | 520 | 10.84 | Mlig455_027290 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_027290 {REF} {Length: 468} {NoTransDecoderORF} {RNA1509_26835} {RNA1310_8654.1, RNA1509_26835} {RNA1509_26835, RNA815_52274} | |
| 2. | MligTC455_30482 | 204 | 4.25 | Mlig455_050680 | Neo: - Age: - |
GALC | 1.763 | - | - | 0.957 | 0.806 | - | - | Mlig455_050680 {REF} {Length: 3150} {Pfam: Glycosyl hydrolase family 59 [PF02057.17, score=374.2]; Glycosyl hydrolase family 59 central domain [PF17387.4, score=133.9]} {Human: ENSG00000054983, GALC, galactosylceramidase, [RH, Score=555, Expect=0.0]} {Mouse: ENSMUSG00000021003, Galc, galactosylceramidase, [RH, Score=533, Expect=0.0]} {Celegans: WBGene00016207, C29E4.10, Putative galactocerebrosidase, [RH, Score=311, Expect=2e-96]} {Smed: dd_Smed_v6_2699_0_1, dd_Smed_v6_2699_0_1, [RH, Score=591, Expect=0.0]} {RNA1509_20503, RNA1509_46247} {RNA1310_5601, RNA1509_20503, RNA1509_46247} {RNA1509_20503, RNA1509_46247, RNA815_1400} |
| 3. | MligTC455_40191 | 742 | 15.45 | Mlig455_057496 | Neo: - Age: - |
CPSF4L | 0.964 | - | - | - | - | - | 0.964 | Mlig455_057496 {REF} {Length: 5411} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4603) [PF15376.8, score=31.4]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=29.4]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.8]; Torus domain [PF16131.7, score=23.6]; Zinc finger domain [PF18345.3, score=20.5]} {Human: ENSG00000187959, CPSF4L, cleavage and polyadenylation specific factor 4 like, [Score=51.2, Expect=8e-07]; ENSG00000170871, KIAA0232, KIAA0232, [Score=50.1, Expect=1e-05]} {Mouse: ENSMUSG00000029190, D5Ertd579e, DNA segment, Chr 5, ERATO Doi 579, expressed, [Score=55.8, Expect=2e-07]} {Smed: dd_Smed_v6_14012_0_1, dd_Smed_v6_14012_0_1, [RH, Score=99.4, Expect=1e-21]} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1310_12659.1, RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815, RNA815_306} |
| 4. | MligTC455_34167 | 599 | 12.49 | Mlig455_056273 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 1.787/0.00113 |
VAV2 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_056273 {REF} {Length: 4422} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=115.8]; SH2 domain [PF00017.26, score=61.7]; Calponin homology (CH) domain [PF00307.33, score=39.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=29.2]; Variant SH3 domain [PF07653.19, score=28.8]; CAMSAP CH domain [PF11971.10, score=24.8]; Variant SH3 domain [PF14604.8, score=21.9]} {Human: ENSG00000160293, VAV2, vav guanine nucleotide exchange factor 2, [RH, Score=332, Expect=2e-99]; ENSG00000134215, VAV3, vav guanine nucleotide exchange factor 3, [RH, Score=321, Expect=2e-95]} {Mouse: ENSMUSG00000009621, Vav2, vav 2 oncogene, [RH, Score=325, Expect=4e-97]; ENSMUSG00000033721, Vav3, vav 3 oncogene, [RH, Score=314, Expect=6e-93]} {Dmel: FBgn0040068, Vav, Vav guanine nucleotide exchange factor, [RH, Score=214, Expect=6e-58]} {Celegans: WBGene00006887, vav-1, [Score=206, Expect=1e-54]} {Smed: dd_Smed_v6_6109_0_1, dd_Smed_v6_6109_0_1, [RH, Score=297, Expect=7e-88]} {RNA1509_6656} {RNA1310_4823.2, RNA1509_6656} {RNA1509_6656, RNA815_4374} |
| 5. | MligTC455_29145 | 72 | 1.51 | Mlig455_014865 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_014865 {REF} {Length: 3483} {RNA1509_13072} {RNA1310_989.1} {RNA815_1327.1} | |
| 6. | MligTC455_19137 | 807 | 16.82 | Mlig455_067132 | Neo: Irradiation Age: - |
KDM4C | 0.956 | - | - | - | - | - | 0.956 | Mlig455_067132 {REF} {Length: 4923} {TRANSSPLICED} {Pfam: JmjC domain, hydroxylase [PF02373.24, score=145.4]; PHD-zinc-finger like domain [PF13832.8, score=57.1]; jmjN domain [PF02375.19, score=52.4]; PHD-finger [PF13831.8, score=36.5]; Jumonji domain-containing protein 2A Tudor domain [PF18104.3, score=34.5]; PHD-finger [PF00628.31, score=29.8]; PHD-like zinc-binding domain [PF13771.8, score=26.1]; Domain of unknown function (DUF4537) [PF15057.8, score=22.1]; DNA repair protein Crb2 Tudor domain [PF18115.3, score=18.9]} {Human: ENSG00000107077, KDM4C, lysine demethylase 4C, [RH, Score=479, Expect=5e-151]; ENSG00000066135, KDM4A, lysine demethylase 4A, [RH, Score=475, Expect=7e-147]; ENSG00000127663, KDM4B, lysine demethylase 4B, [RH, Score=462, Expect=4e-141]} {Mouse: ENSMUSG00000033326, Kdm4a, lysine (K)-specific demethylase 4A, [RH, Score=476, Expect=4e-147]; ENSMUSG00000028397, Kdm4c, lysine (K)-specific demethylase 4C, [RH, Score=473, Expect=4e-146]; ENSMUSG00000024201, Kdm4b, lysine (K)-specific demethylase 4B, [RH, Score=467, Expect=3e-144]} {Dmel: FBgn0053182, Kdm4B, Lysine (K)-specific demethylase 4B, [RH, Score=474, Expect=6e-151]} {Celegans: WBGene00012982, jmjd-2, Lysine-specific demethylase 4, [RH, Score=328, Expect=3e-95]} {Smed: dd_Smed_v6_10398_0_1, dd_Smed_v6_10398_0_1, [RH, Score=523, Expect=5e-167]} {RNA1509_11069, RNA1509_19042, RNA1509_37896, RNA1509_42721} {RNA1310_1204, RNA1509_11069, RNA1509_19042, RNA1509_37896, RNA1509_42721} {RNA1509_11069, RNA1509_19042, RNA1509_37896, RNA1509_42721, RNA815_6410} |
| 7. | MligTC455_26928 | 570 | 11.87 | Mlig455_032950 | Neo: - Age: logFC(26M/2M)=-0.353 |
DNAAF2 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_032950 {REF} {Length: 5987} {TRANSSPLICED} {Pfam: PIH1 N-terminal domain [PF08190.14, score=164.4]; PIH1 CS-like domain [PF18201.3, score=70.8]} {Human: ENSG00000165506, DNAAF2, dynein axonemal assembly factor 2, [RH, Score=208, Expect=8e-56]} {Mouse: ENSMUSG00000020973, Dnaaf2, dynein, axonemal assembly factor 2, [RH, Score=197, Expect=2e-52]} {Dmel: FBgn0033224, Nop17l, Nop17 like, [RH, Score=236, Expect=1e-65]} {Smed: dd_Smed_v6_14336_0_1, dd_Smed_v6_14336_0_1, [RH, Score=310, Expect=9e-94]} {RNA1509_15744, RNA1509_20346, RNA1509_21241} {RNA1310_6945.1, RNA1509_15744, RNA1509_20346, RNA1509_21241} {RNA1509_15744, RNA1509_20346, RNA1509_21241, RNA815_416.1} |
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