Data search
Results for MligTC455_34167
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34167 | 599 | 12.49 | Mlig455_056273 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 1.787/0.00113 |
VAV2 | Mlig455_056273 {REF} {Length: 4422} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=115.8]; SH2 domain [PF00017.26, score=61.7]; Calponin homology (CH) domain [PF00307.33, score=39.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=29.2]; Variant SH3 domain [PF07653.19, score=28.8]; CAMSAP CH domain [PF11971.10, score=24.8]; Variant SH3 domain [PF14604.8, score=21.9]} {Human: ENSG00000160293, VAV2, vav guanine nucleotide exchange factor 2, [RH, Score=332, Expect=2e-99]; ENSG00000134215, VAV3, vav guanine nucleotide exchange factor 3, [RH, Score=321, Expect=2e-95]} {Mouse: ENSMUSG00000009621, Vav2, vav 2 oncogene, [RH, Score=325, Expect=4e-97]; ENSMUSG00000033721, Vav3, vav 3 oncogene, [RH, Score=314, Expect=6e-93]} {Dmel: FBgn0040068, Vav, Vav guanine nucleotide exchange factor, [RH, Score=214, Expect=6e-58]} {Celegans: WBGene00006887, vav-1, [Score=206, Expect=1e-54]} {Smed: dd_Smed_v6_6109_0_1, dd_Smed_v6_6109_0_1, [RH, Score=297, Expect=7e-88]} {RNA1509_6656} {RNA1310_4823.2, RNA1509_6656} {RNA1509_6656, RNA815_4374} |
Cumulative graph for MligTC455_34167
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.247 | 4.063 | 0.80901 | 1.00000 | |
| RegionR2 | -0.671 | 4.063 | 0.18381 | 0.53565 | |
| RegionR3 | 0.007 | 4.063 | 0.98509 | 1.00000 | |
| RegionR4 | 1.787 | 4.063 | 0.00007 | 0.00113 | |
| RegionR5 | -0.37 | 4.063 | 0.33312 | 0.67883 | |
| RegionR6 | -0.212 | 4.063 | 0.60873 | 1.00000 | |
| RegionR7 | -0.512 | 4.063 | 0.34496 | 0.98207 | |
| RegionR8 | -0.276 | 4.063 | 0.66193 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.327 | 4.063 | 0.06099 | 0.72881 | |
| RegenerationR2 | 0.639 | 4.063 | 0.13637 | 0.56365 | |
| RegenerationR3 | -0.011 | 4.063 | 0.98141 | 1.00000 | |
| RegenerationR4 | -1.221 | 4.063 | 0.00923 | 0.14446 | |
| RegenerationR5 | 0.529 | 4.063 | 0.22949 | 0.66395 | |
| RegenerationR6 | -0.188 | 4.063 | 0.70196 | 0.92529 | |
| RegenerationBL | -1.128 | 4.063 | 0.09584 | 0.36301 | |
| RegenerationTP | 0.054 | 4.063 | 0.92849 | 1.00000 |
Genes with expression patterns similar to MligTC455_34167
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34167 | 599 | 12.49 | Mlig455_056273 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 1.787/0.00113 |
VAV2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_056273 {REF} {Length: 4422} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=115.8]; SH2 domain [PF00017.26, score=61.7]; Calponin homology (CH) domain [PF00307.33, score=39.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=29.2]; Variant SH3 domain [PF07653.19, score=28.8]; CAMSAP CH domain [PF11971.10, score=24.8]; Variant SH3 domain [PF14604.8, score=21.9]} {Human: ENSG00000160293, VAV2, vav guanine nucleotide exchange factor 2, [RH, Score=332, Expect=2e-99]; ENSG00000134215, VAV3, vav guanine nucleotide exchange factor 3, [RH, Score=321, Expect=2e-95]} {Mouse: ENSMUSG00000009621, Vav2, vav 2 oncogene, [RH, Score=325, Expect=4e-97]; ENSMUSG00000033721, Vav3, vav 3 oncogene, [RH, Score=314, Expect=6e-93]} {Dmel: FBgn0040068, Vav, Vav guanine nucleotide exchange factor, [RH, Score=214, Expect=6e-58]} {Celegans: WBGene00006887, vav-1, [Score=206, Expect=1e-54]} {Smed: dd_Smed_v6_6109_0_1, dd_Smed_v6_6109_0_1, [RH, Score=297, Expect=7e-88]} {RNA1509_6656} {RNA1310_4823.2, RNA1509_6656} {RNA1509_6656, RNA815_4374} |
| 2. | MligTC455_35830 | 581 | 12.1 | Mlig455_042761 | Neo: - |
MAPKAPK2 | 1.819 | - | - | 0.858 | - | - | 0.961 | Mlig455_042761 {REF} {Length: 2863} {Pfam: Protein kinase domain [PF00069.27, score=208.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=92.3]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=24.6]; Kinase-like [PF14531.8, score=20.7]} {Human: ENSG00000162889, MAPKAPK2, mitogen-activated protein kinase-activated protein kinase 2, [Score=441, Expect=3e-155]; ENSG00000114738, MAPKAPK3, mitogen-activated protein kinase-activated protein kinase 3, [Score=426, Expect=1e-149]} {Mouse: ENSMUSG00000016528, Mapkapk2, MAP kinase-activated protein kinase 2, [Score=441, Expect=2e-155]; ENSMUSG00000032577, Mapkapk3, mitogen-activated protein kinase-activated protein kinase 3, [Score=428, Expect=2e-150]} {Dmel: FBgn0013987, MAPk-Ak2, MAP kinase activated protein-kinase-2, [Score=418, Expect=5e-147]} {Celegans: WBGene00007007, mak-2, MAP kinase-activated protein kinase mak-2, [Score=385, Expect=5e-134]} {Smed: dd_Smed_v6_12176_0_2, dd_Smed_v6_12176_0_2, [Score=426, Expect=1e-150]} {RNA1509_9679} {RNA1310_46134} {RNA815_6588} |
| 3. | MligTC455_26928 | 570 | 11.87 | Mlig455_032950 | Neo: - Age: logFC(26M/2M)=-0.353 |
DNAAF2 | 1.708 | - | - | - | - | 0.731 | 0.977 | Mlig455_032950 {REF} {Length: 5987} {TRANSSPLICED} {Pfam: PIH1 N-terminal domain [PF08190.14, score=164.4]; PIH1 CS-like domain [PF18201.3, score=70.8]} {Human: ENSG00000165506, DNAAF2, dynein axonemal assembly factor 2, [RH, Score=208, Expect=8e-56]} {Mouse: ENSMUSG00000020973, Dnaaf2, dynein, axonemal assembly factor 2, [RH, Score=197, Expect=2e-52]} {Dmel: FBgn0033224, Nop17l, Nop17 like, [RH, Score=236, Expect=1e-65]} {Smed: dd_Smed_v6_14336_0_1, dd_Smed_v6_14336_0_1, [RH, Score=310, Expect=9e-94]} {RNA1509_15744, RNA1509_20346, RNA1509_21241} {RNA1310_6945.1, RNA1509_15744, RNA1509_20346, RNA1509_21241} {RNA1509_15744, RNA1509_20346, RNA1509_21241, RNA815_416.1} |
| 4. | MligTC455_40191 | 742 | 15.45 | Mlig455_057496 | Neo: - Age: - |
CPSF4L | 0.971 | - | - | - | - | - | 0.971 | Mlig455_057496 {REF} {Length: 5411} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4603) [PF15376.8, score=31.4]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=29.4]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=23.8]; Torus domain [PF16131.7, score=23.6]; Zinc finger domain [PF18345.3, score=20.5]} {Human: ENSG00000187959, CPSF4L, cleavage and polyadenylation specific factor 4 like, [Score=51.2, Expect=8e-07]; ENSG00000170871, KIAA0232, KIAA0232, [Score=50.1, Expect=1e-05]} {Mouse: ENSMUSG00000029190, D5Ertd579e, DNA segment, Chr 5, ERATO Doi 579, expressed, [Score=55.8, Expect=2e-07]} {Smed: dd_Smed_v6_14012_0_1, dd_Smed_v6_14012_0_1, [RH, Score=99.4, Expect=1e-21]} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1310_12659.1, RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815} {RNA1509_12987, RNA1509_13189, RNA1509_28003, RNA1509_32009, RNA1509_3288, RNA1509_41548, RNA1509_50815, RNA815_306} |
| 5. | MligTC455_47617 | 520 | 10.84 | Mlig455_027290 | Neo: - Age: - |
0.962 | - | - | - | - | - | 0.962 | Mlig455_027290 {REF} {Length: 468} {NoTransDecoderORF} {RNA1509_26835} {RNA1310_8654.1, RNA1509_26835} {RNA1509_26835, RNA815_52274} | |
| 6. | MligTC455_23490 | 367 | 7.64 | Mlig455_019595 | Neo: - Age: Up-Down-Down |
0.958 | - | - | - | - | - | 0.958 | Mlig455_019595 {REF} {Length: 1836} {NoTransDecoderORF} {RNA1509_20980} {RNA1310_8876.1, RNA1509_20980} {RNA1509_20980, RNA815_13562.1} | |
| 7. | MligTC455_27910 | 912 | 19 | Mlig455_042235, Mlig455_047076 | Neo: - Age: - |
TRAF4 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_042235 {REF} {Length: 4548} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=58.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=28.5]; RING-type zinc-finger [PF13445.8, score=26.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=26.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.8]; Ring finger domain [PF13639.8, score=20.8]} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [Score=72.4, Expect=3e-13]} {Mouse: ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=83.2, Expect=8e-17]; ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [Score=79.7, Expect=8e-16]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [Score=70.9, Expect=3e-13]} {RNA1509_17572, RNA1509_26634} {RNA1310_20276, RNA1509_17572, RNA1509_26634} {RNA1509_17572, RNA1509_26634, RNA815_4920} Mlig455_047076 {REF} {Length: 4661} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=58.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=28.5]; RING-type zinc-finger [PF13445.8, score=26.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=26.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.8]; Ring finger domain [PF13639.8, score=20.8]} {Human: ENSG00000076604, TRAF4, TNF receptor associated factor 4, [Score=72.4, Expect=3e-13]} {Mouse: ENSMUSG00000027164, Traf6, TNF receptor-associated factor 6, [Score=83.2, Expect=8e-17]; ENSMUSG00000017386, Traf4, TNF receptor associated factor 4, [Score=79.7, Expect=8e-16]} {Smed: dd_Smed_v6_13517_0_1, dd_Smed_v6_13517_0_1, [Score=70.9, Expect=3e-13]} {RNA1509_17572, RNA1509_34532} {RNA1310_20116, RNA1509_34532} {RNA1509_34532, RNA815_4920} |
| 8. | MligTC455_51418 | 379 | 7.89 | Mlig455_064315, Mlig455_064347 | Neo: Neoblast Age: Up-Down-Down |
0.951 | - | - | - | - | - | 0.951 | Mlig455_064315 {REF} {Length: 1167} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_16248} {RNA1310_25939} {RNA815_11455} Mlig455_064347 {REF} {Length: 379} {NoTransDecoderORF} {RNA1509_16248} {RNA1310_25939} {RNA815_11455} |
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