Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_47889 | 2379 | 49.55 | Mlig455_001724 | Neo: Irradiation Age: Down-Up-Down |
PCYT2 | Mlig455_001724 {REF} {Length: 2684} {Pfam: Cytidylyltransferase-like [PF01467.28, score=161.4]; FAD synthetase [PF06574.14, score=22.7]} {Human: ENSG00000185813, PCYT2, phosphate cytidylyltransferase 2, ethanolamine, [RH, Score=453, Expect=3e-159]} {Mouse: ENSMUSG00000025137, Pcyt2, phosphate cytidylyltransferase 2, ethanolamine, [RH, Score=454, Expect=5e-160]} {Dmel: FBgn0032482, Pect, Phosphoethanolamine cytidylyltransferase, [RH, Score=445, Expect=1e-156]} {Celegans: WBGene00021352, Y37E3.11, [RH, Score=403, Expect=2e-140]} {Smed: dd_Smed_v6_3373_0_1, dd_Smed_v6_3373_0_1, [RH, Score=395, Expect=1e-137]} {RNA1509_17383, RNA1509_3108} {RNA1310_11318.1, RNA1509_17383, RNA1509_3108} {RNA1509_17383, RNA1509_3108, RNA815_4355.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | 0.393 | 5.789 | 0.47675 | 1.00000 | |
RegionR2 | -0.627 | 5.789 | 0.07578 | 0.33661 | |
RegionR3 | -0.105 | 5.789 | 0.71000 | 1.00000 | |
RegionR4 | 0.536 | 5.789 | 0.07632 | 0.25654 | |
RegionR5 | 0.591 | 5.789 | 0.01789 | 0.08920 | |
RegionR6 | 0.119 | 5.789 | 0.66911 | 1.00000 | |
RegionR7 | -0.561 | 5.789 | 0.11512 | 0.64276 | |
RegionR8 | -0.346 | 5.789 | 0.42167 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -1.925 | 5.789 | 0.02595 | 0.60362 | |
RegenerationR2 | 0.006 | 5.789 | 0.98480 | 1.00000 | |
RegenerationR3 | 0.09 | 5.789 | 0.79304 | 0.98001 | |
RegenerationR4 | -0.557 | 5.789 | 0.09806 | 0.48582 | |
RegenerationR5 | -0.069 | 5.789 | 0.82759 | 0.99697 | |
RegenerationR6 | -0.203 | 5.789 | 0.54848 | 0.83825 | |
RegenerationBL | 0.641 | 5.789 | 0.06346 | 0.29267 | |
RegenerationTP | -0.482 | 5.789 | 0.26240 | 0.71019 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_47889 | 2379 | 49.55 | Mlig455_001724 | Neo: Irradiation Age: Down-Up-Down |
PCYT2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_001724 {REF} {Length: 2684} {Pfam: Cytidylyltransferase-like [PF01467.28, score=161.4]; FAD synthetase [PF06574.14, score=22.7]} {Human: ENSG00000185813, PCYT2, phosphate cytidylyltransferase 2, ethanolamine, [RH, Score=453, Expect=3e-159]} {Mouse: ENSMUSG00000025137, Pcyt2, phosphate cytidylyltransferase 2, ethanolamine, [RH, Score=454, Expect=5e-160]} {Dmel: FBgn0032482, Pect, Phosphoethanolamine cytidylyltransferase, [RH, Score=445, Expect=1e-156]} {Celegans: WBGene00021352, Y37E3.11, [RH, Score=403, Expect=2e-140]} {Smed: dd_Smed_v6_3373_0_1, dd_Smed_v6_3373_0_1, [RH, Score=395, Expect=1e-137]} {RNA1509_17383, RNA1509_3108} {RNA1310_11318.1, RNA1509_17383, RNA1509_3108} {RNA1509_17383, RNA1509_3108, RNA815_4355.1} |
2. | MligTC455_35424 | 1032 | 21.49 | Mlig455_047445 | Neo: Irradiation Age: logFC(26M/2M)=0.333 Region-enriched R5: 1.087/0.01414 |
DIMT1 | 3.318 | - | - | 0.711 | 0.853 | 0.779 | 0.975 | Mlig455_047445 {REF} {Length: 1404} {TRANSSPLICED} {Pfam: Ribosomal RNA adenine dimethylase [PF00398.22, score=215.5]; Methyltransferase domain [PF13649.8, score=31.6]; Methyltransferase domain [PF08241.14, score=21.8]; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) [PF01135.21, score=21.5]; Methyltransferase small domain [PF05175.16, score=20.4]} {Human: ENSG00000086189, DIMT1, DIM1 dimethyladenosine transferase 1 homolog, [RH, Score=351, Expect=5e-121]} {Mouse: ENSMUSG00000021692, Dimt1, DIM1 dimethyladenosine transferase 1-like (S. cerevisiae), [RH, Score=352, Expect=2e-121]} {Dmel: FBgn0039627, CG11837, [RH, Score=361, Expect=2e-125]} {Celegans: WBGene00008455, E02H1.1, Probable dimethyladenosine transferase, [RH, Score=335, Expect=5e-115]} {Smed: dd_Smed_v6_5268_0_1, dd_Smed_v6_5268_0_1, [RH, Score=337, Expect=5e-116]} {RNA1509_25798} {RNA1310_23608.2, RNA1509_25798} {RNA1509_25798, RNA815_9867} |
3. | MligTC455_49069 | 3685 | 76.77 | Mlig455_070251 | Neo: - Age: logFC(26M/2M)=0.212 Region-enriched R4: 1.746/0.00071 |
CS | 1.813 | - | - | - | 0.952 | 0.861 | - | Mlig455_070251 {REF} {Length: 2221} {TRANSSPLICED} {Pfam: Citrate synthase, C-terminal domain [PF00285.23, score=347.7]} {Human: ENSG00000062485, CS, citrate synthase, [RH, Score=701, Expect=0.0]} {Mouse: ENSMUSG00000005683, Cs, citrate synthase, [RH, Score=699, Expect=0.0]; ENSMUSG00000046934, Csl, citrate synthase like, [RH, Score=687, Expect=0.0]} {Dmel: FBgn0261955, kdn, knockdown, [RH, Score=694, Expect=0.0]} {Celegans: WBGene00000833, cts-1, Probable citrate synthase, mitochondrial, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_335_0_1, dd_Smed_v6_335_0_1, [RH, Score=706, Expect=0.0]} {RNA1509_762} {RNA1310_11494.1} {RNA815_3764.1} |
4. | MligTC455_20065 | 1482 | 30.87 | Mlig455_000221, Mlig455_058479 | Neo: - Age: Down-Up-Up |
PIGW | 1.694 | - | - | - | 0.737 | - | 0.957 | Mlig455_000221 {REF} {Length: 2066} {TRANSSPLICED} {Pfam: GWT1 [PF06423.14, score=72.6]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=79.0, Expect=1e-14]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=100, Expect=1e-21]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=115, Expect=4e-27]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=106, Expect=5e-24]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=120, Expect=6e-29]} {RNA1509_19464, RNA1509_29630} {RNA1310_6153, RNA1509_19464, RNA1509_29630} {RNA1509_19464, RNA1509_29630, RNA815_7740} Mlig455_058479 {REF} {Length: 2310} {Pfam: GWT1 [PF06423.14, score=70.1]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=74.3, Expect=2e-13]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=96.7, Expect=1e-20]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=113, Expect=2e-26]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=102, Expect=6e-23]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=119, Expect=1e-28]} {RNA1509_19464} {RNA1310_6153} {RNA815_7740} |
5. | MligTC455_46064 | 2927 | 60.98 | Mlig455_066196 | Neo: - |
ADK | 1.682 | - | - | 0.732 | - | 0.950 | - | Mlig455_066196 {REF} {Length: 2931} {TRANSSPLICED} {Pfam: pfkB family carbohydrate kinase [PF00294.26, score=191.1]} {Human: ENSG00000156110, ADK, adenosine kinase, [RH, Score=307, Expect=1e-102]} {Mouse: ENSMUSG00000039197, Adk, adenosine kinase, [RH, Score=306, Expect=2e-102]} {Dmel: FBgn0036337, AdenoK, Adenosine Kinase, [RH, Score=297, Expect=6e-99]} {Celegans: WBGene00011128, R07H5.8, [RH, Score=298, Expect=1e-99]} {Smed: dd_Smed_v6_627_0_1, dd_Smed_v6_627_0_1, [RH, Score=294, Expect=4e-98]} {RNA1509_1910} {RNA1310_11728.1} {RNA815_10419} |
6. | MligTC455_08189 | 422 | 8.78 | Mlig455_055754 | Neo: - Age: - Region-enriched R5: 1.257/0.01328 |
0.971 | - | - | - | - | - | 0.971 | Mlig455_055754 {REF} {Length: 1152} {TRANSSPLICED} {RNA1509_44842} {RNA1310_31507.1, RNA1509_44842} {RNA1509_44842, RNA815_13475} | |
7. | MligTC455_37633 | 253 | 5.28 | Mlig455_060607, Mlig455_060648 | Neo: - Age: - Region-enriched R5: 1.871/0.01419 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_060607 {REF} {Length: 2164} {RNA1509_34811} {RNA1310_15339.1} {RNA815_53747} Mlig455_060648 {REF} {Length: 2340} {RNA1509_34811} {RNA1310_15339.1, RNA1509_34811} {RNA1509_34811, RNA815_53747} |
|
8. | MligTC455_19857 | 1152 | 23.99 | Mlig455_035681, Mlig455_035777, Mlig455_035888 | Neo: - Age: - Region-enriched R5: 1.004/0.02280 |
DNAJC17 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_035681 {REF} {Length: 1173} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=76.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.9]} {Human: ENSG00000104129, DNAJC17, DnaJ heat shock protein family (Hsp40) member C17, [RH, Score=136, Expect=3e-37]} {Mouse: ENSMUSG00000034278, Dnajc17, DnaJ heat shock protein family (Hsp40) member C17, [RH, Score=134, Expect=2e-36]} {Dmel: FBgn0037882, CG17187, [RH, Score=119, Expect=3e-31]} {Celegans: WBGene00001040, dnj-22, DNaJ domain (Prokaryotic heat shock protein), [Score=68.9, Expect=4e-13]} {Smed: dd_Smed_v6_3668_0_1, dd_Smed_v6_3668_0_1, [Score=68.9, Expect=9e-14]} {RNA1509_23553} {RNA1310_28590} {RNA815_14365} Mlig455_035777 {REF} {Length: 1176} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=76.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.0]} {Human: ENSG00000104129, DNAJC17, DnaJ heat shock protein family (Hsp40) member C17, [RH, Score=134, Expect=3e-36]} {Mouse: ENSMUSG00000034278, Dnajc17, DnaJ heat shock protein family (Hsp40) member C17, [RH, Score=130, Expect=2e-35]} {Dmel: FBgn0037882, CG17187, [RH, Score=119, Expect=3e-31]} {Celegans: WBGene00001040, dnj-22, DNaJ domain (Prokaryotic heat shock protein), [Score=68.6, Expect=5e-13]} {Smed: dd_Smed_v6_3668_0_1, dd_Smed_v6_3668_0_1, [Score=68.9, Expect=9e-14]} {RNA1509_23553, RNA1509_38476} {RNA1310_28590, RNA1509_23553, RNA1509_38476} {RNA1509_23553, RNA1509_38476, RNA815_14365} Mlig455_035888 {REF} {Length: 1174} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=78.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=20.9]} {Human: ENSG00000104129, DNAJC17, DnaJ heat shock protein family (Hsp40) member C17, [RH, Score=136, Expect=2e-37]} {Mouse: ENSMUSG00000034278, Dnajc17, DnaJ heat shock protein family (Hsp40) member C17, [RH, Score=134, Expect=8e-37]} {Dmel: FBgn0037882, CG17187, [RH, Score=118, Expect=4e-31]} {Celegans: WBGene00001040, dnj-22, DNaJ domain (Prokaryotic heat shock protein), [Score=68.2, Expect=5e-13]} {Smed: dd_Smed_v6_3668_0_1, dd_Smed_v6_3668_0_1, [Score=68.6, Expect=8e-14]} {RNA1509_23553} {RNA1310_28590} {RNA815_14365} |
9. | MligTC455_44967 | 402 | 8.38 | Mlig455_050720 | Neo: Int S/G2/M Age: - |
NUP133 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_050720 {REF} {Length: 7508} {TRANSSPLICED} {Pfam: Non-repetitive/WGA-negative nucleoporin C-terminal [PF03177.16, score=65.8]} {Human: ENSG00000069248, NUP133, nucleoporin 133, [RH, Score=152, Expect=4e-36]} {Mouse: ENSMUSG00000039509, Nup133, nucleoporin 133, [RH, Score=163, Expect=1e-39]} {Dmel: FBgn0039004, Nup133, Nucleoporin 133kD, [RH, Score=102, Expect=3e-21]} {Smed: dd_Smed_v6_5977_0_1, dd_Smed_v6_5977_0_1, [RH, Score=55.1, Expect=5e-07]} {RNA1509_31103, RNA1509_9832} {RNA1310_2306.1, RNA1509_31103, RNA1509_9832} {RNA1509_31103, RNA1509_9832, RNA815_1062} |
10. | MligTC455_19941 | 222 | 4.62 | Mlig455_045624 | Neo: - |
RNPS1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_045624 {REF} {Length: 1207} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=47.0]} {Human: ENSG00000205937, RNPS1, RNA binding protein with serine rich domain 1, [RH, Score=119, Expect=8e-32]} {Mouse: ENSMUSG00000034681, Rnps1, ribonucleic acid binding protein S1, [RH, Score=119, Expect=8e-32]} {Dmel: FBgn0037707, RnpS1, RNA-binding protein S1, [RH, Score=94.0, Expect=5e-22]} {Celegans: WBGene00004388, rnp-5, RNP (RRM RNA binding domain) containing, [RH, Score=87.8, Expect=2e-20]} {Smed: dd_Smed_v6_1431_0_1, dd_Smed_v6_1431_0_1, [RH, Score=104, Expect=5e-26]} {RNA1509_14792} {RNA1310_28374} {RNA815_13087} |
11. | MligTC455_17124 | 484 | 10.08 | Mlig455_002400, Mlig455_060153 | Neo: Irradiation Age: Down-Up-Up Region-enriched R4: 2.442/0.02922 |
NFYC | 0.953 | - | - | - | - | - | 0.953 | Mlig455_002400 {REF} {Length: 2095} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1, RNA1509_28888} {RNA1509_28888, RNA815_29133} Mlig455_060153 {REF} {Length: 2439} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1} {RNA815_29133} |
12. | MligTC455_04160 | 657 | 13.7 | Mlig455_052970, Mlig455_053031 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_052970 {REF} {Length: 1616} {TRANSSPLICED} {Pfam: DTW domain [PF03942.17, score=118.1]} {Mouse: ENSMUSG00000024505, Dtwd2, DTW domain containing 2, [RH, Score=124, Expect=9e-34]} {Dmel: FBgn0037492, CG10050, [RH, Score=162, Expect=2e-49]} {Smed: dd_Smed_v6_12942_0_1, dd_Smed_v6_12942_0_1, [RH, Score=160, Expect=9e-49]} {RNA1509_34162, RNA1509_43715, RNA1509_52175} {RNA1310_38151, RNA1509_34162, RNA1509_43715, RNA1509_52175} {RNA1509_34162, RNA1509_43715, RNA1509_52175, RNA815_21826} Mlig455_053031 {REF} {Length: 1775} {TRANSSPLICED} {Pfam: DTW domain [PF03942.17, score=118.2]} {Mouse: ENSMUSG00000024505, Dtwd2, DTW domain containing 2, [RH, Score=124, Expect=8e-34]} {Dmel: FBgn0037492, CG10050, [RH, Score=163, Expect=1e-49]} {Smed: dd_Smed_v6_12942_0_1, dd_Smed_v6_12942_0_1, [RH, Score=160, Expect=6e-49]} {RNA1509_34162, RNA1509_58371} {RNA1310_38151, RNA1509_58371} {RNA1509_58371, RNA815_21826} |
|
13. | MligTC455_53394 | 4109 | 85.59 | Mlig455_047970 | Neo: - Age: Up-Down-Down Regeneration-downregulated R3: -3.745 Regeneration-depleted R3: -3.745 |
AC099489.1 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_047970 {REF} {Length: 12677} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=204.5]; Domain of unknown function (DUF1943) [PF09172.13, score=111.1]; von Willebrand factor type D domain [PF00094.27, score=43.6]} {Human: ENSG00000188897, AC099489.1, vitellogenin, [Score=171, Expect=3e-41]} {Mouse: ENSMUSG00000020609, Apob, apolipoprotein B, [Score=94.0, Expect=5e-18]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=154, Expect=2e-36]} {Smed: dd_Smed_v6_636_0_1, dd_Smed_v6_636_0_1, [Score=178, Expect=4e-44]} {RNA1509_22} {RNA1310_66} {RNA815_31.1} |