Data search
Results for MligTC455_53394
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53394 | 4109 | 85.59 | Mlig455_047970 | Neo: - Age: Up-Down-Down Regeneration-downregulated R3: -3.745 Regeneration-depleted R3: -3.745 |
AC099489.1 | Mlig455_047970 {REF} {Length: 12677} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=204.5]; Domain of unknown function (DUF1943) [PF09172.13, score=111.1]; von Willebrand factor type D domain [PF00094.27, score=43.6]} {Human: ENSG00000188897, AC099489.1, vitellogenin, [Score=171, Expect=3e-41]} {Mouse: ENSMUSG00000020609, Apob, apolipoprotein B, [Score=94.0, Expect=5e-18]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=154, Expect=2e-36]} {Smed: dd_Smed_v6_636_0_1, dd_Smed_v6_636_0_1, [Score=178, Expect=4e-44]} {RNA1509_22} {RNA1310_66} {RNA815_31.1} |
Cumulative graph for MligTC455_53394
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.638 | 6.637 | 0.59075 | 1.00000 | |
| RegionR2 | -1.283 | 6.637 | 0.13256 | 0.45205 | |
| RegionR3 | 0.441 | 6.637 | 0.50792 | 0.99745 | |
| RegionR4 | -0.86 | 6.637 | 0.27258 | 0.57888 | |
| RegionR5 | 1.377 | 6.637 | 0.03525 | 0.14539 | |
| RegionR6 | 1.483 | 6.637 | 0.02621 | 0.29643 | |
| RegionR7 | -0.678 | 6.637 | 0.35291 | 0.98911 | |
| RegionR8 | 0.158 | 6.637 | 0.84265 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.88 | 6.637 | 0.23673 | 0.96575 | |
| RegenerationR2 | -2.988 | 6.637 | 0.00206 | 0.06907 | |
| RegenerationR3 | -3.745 | 6.637 | 0.00007 | 0.00887 | Specific for R3: -3.745 |
| RegenerationR4 | -3.107 | 6.637 | 0.00077 | 0.02939 | |
| RegenerationR5 | -2.528 | 6.637 | 0.00450 | 0.12118 | |
| RegenerationR6 | -3.309 | 6.637 | 0.00053 | 0.02414 | |
| RegenerationBL | -3.568 | 6.637 | 0.00054 | 0.01480 | |
| RegenerationTP | -2.51 | 6.637 | 0.00998 | 0.16978 |
Genes with expression patterns similar to MligTC455_53394
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53394 | 4109 | 85.59 | Mlig455_047970 | Neo: - Age: Up-Down-Down Regeneration-downregulated R3: -3.745 Regeneration-depleted R3: -3.745 |
AC099489.1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_047970 {REF} {Length: 12677} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=204.5]; Domain of unknown function (DUF1943) [PF09172.13, score=111.1]; von Willebrand factor type D domain [PF00094.27, score=43.6]} {Human: ENSG00000188897, AC099489.1, vitellogenin, [Score=171, Expect=3e-41]} {Mouse: ENSMUSG00000020609, Apob, apolipoprotein B, [Score=94.0, Expect=5e-18]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=154, Expect=2e-36]} {Smed: dd_Smed_v6_636_0_1, dd_Smed_v6_636_0_1, [Score=178, Expect=4e-44]} {RNA1509_22} {RNA1310_66} {RNA815_31.1} |
| 2. | MligTC455_53393 | 19628 | 408.92 | Mlig455_019898 | Neo: - Age: Up-Down-Down Regeneration-depleted R3: -3.803 |
AC099489.1 | 5.198 | 0.833 | 0.778 | 0.972 | 0.874 | 0.771 | 0.970 | Mlig455_019898 {REF} {Length: 11591} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=204.2]; Domain of unknown function (DUF1943) [PF09172.13, score=109.0]; von Willebrand factor type D domain [PF00094.27, score=28.1]} {Human: ENSG00000188897, AC099489.1, vitellogenin, [Score=169, Expect=7e-41]} {Mouse: ENSMUSG00000020609, Apob, apolipoprotein B, [Score=94.0, Expect=4e-18]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=152, Expect=7e-36]} {Smed: dd_Smed_v6_636_0_1, dd_Smed_v6_636_0_1, [Score=179, Expect=2e-44]} {RNA1509_69} {RNA1310_66} {RNA815_31.1} |
| 3. | MligTC455_53392 | 19385 | 403.85 | Mlig455_011756 | Neo: - Age: Up-Down-Down |
AC099489.1 | 5.197 | 0.836 | 0.792 | 0.960 | 0.852 | 0.772 | 0.985 | Mlig455_011756 {REF} {Length: 12638} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=206.4]; Domain of unknown function (DUF1943) [PF09172.13, score=113.7]; von Willebrand factor type D domain [PF00094.27, score=46.2]; C8 domain [PF08742.13, score=20.4]} {Human: ENSG00000188897, AC099489.1, vitellogenin, [Score=172, Expect=1e-41]} {Mouse: ENSMUSG00000020609, Apob, apolipoprotein B, [Score=95.1, Expect=2e-18]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=156, Expect=3e-37]} {Smed: dd_Smed_v6_636_0_1, dd_Smed_v6_636_0_1, [Score=176, Expect=2e-43]} {RNA1509_1881, RNA1509_22, RNA1509_49208} {RNA1310_66, RNA1509_1881, RNA1509_49208} {RNA1509_1881, RNA1509_49208, RNA815_31.1} |
| 4. | MligTC455_34558 | 5822 | 121.3 | Mlig455_058216 | Neo: Germline Age: Down-Up-Down, logFC(26M/2M)=1.759 Region-enriched R5: 3.849/0.00000 Regeneration-downregulated R6: -4.179 Regeneration-depleted R6: -4.179 |
2.54 | - | - | 0.780 | - | 0.798 | 0.962 | Mlig455_058216 {REF} {Length: 739} {RNA1509_7156} {RNA1310_54087} {RNA815_12035.2} | |
| 5. | MligTC455_34557 | 5999 | 124.97 | Mlig455_058169 | Neo: Germline Age: - Region-specific R5: 4.642 Region-enriched R5: 3.864/0.00000 Regeneration-downregulated R6: -3.970 Regeneration-depleted R6: -3.970 |
2.535 | - | - | 0.779 | - | 0.793 | 0.963 | Mlig455_058169 {REF} {Length: 717} {Pfam: Keratin type II head [PF16208.7, score=20.3]} {RNA1509_512, RNA1509_7156} {RNA1310_54087, RNA1509_512, RNA1509_7156} {RNA1509_512, RNA1509_7156, RNA815_12035.2} | |
| 6. | MligTC455_10749 | 912 | 19.01 | Mlig455_006601, Mlig455_061244 | Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.894 Region-enriched R5: 1.352/0.04840 |
1.704 | - | - | 0.730 | - | 0.974 | - | Mlig455_006601 {REF} {Length: 809} {RNA1509_56607} {RNA1310_53537.2} {RNA815_22579} Mlig455_061244 {REF} {Length: 762} {RNA1509_34870, RNA1509_44549, RNA1509_56607} {RNA1310_53537.1, RNA1509_34870, RNA1509_44549, RNA1509_56607} {RNA1509_34870, RNA1509_44549, RNA1509_56607, RNA815_22579} |
|
| 7. | MligTC455_25495 | 63 | 1.32 | Mlig455_041833 | Neo: Int S/G2/M Age: - |
1.699 | - | - | - | 0.749 | 0.950 | - | Mlig455_041833 {REF} {Length: 1108} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=19.1]} {RNA1509_58012} {RNA1310_30801} {RNA815_13842.1} | |
| 8. | MligTC455_00059 | 35 | 0.73 | Mlig455_071038 | Neo: - Age: - |
0.971 | - | - | - | - | - | 0.971 | Mlig455_071038 {REF} {Length: 828} {NoTransDecoderORF} {RNA1509_284} {RNA1310_24413} {RNA815_6153} | |
| 9. | MligTC455_01582 | 43 | 0.89 | Mlig455_046055 | Neo: - Age: - |
0.96 | - | - | - | - | - | 0.960 | Mlig455_046055 {REF} {Length: 504} {NoTransDecoderORF} {RNA1509_284} {RNA1310_24413} {RNA815_6153} | |
| 10. | MligTC455_06440 | 16 | 0.34 | Mlig455_051822, Mlig455_065065 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_051822 {REF} {Length: 335} {Celegans: WBGene00021449, mltn-7, MLt-TeN (Mlt-10) related, [Score=75.5, Expect=1e-17]} Mlig455_065065 {REF} {Length: 666} {NoTransDecoderORF} {RNA1509_54430} {RNA1310_51692} {RNA815_25852} |
|
| 11. | MligTC455_09932 | 22 | 0.45 | Mlig455_017406 | Neo: - Age: - |
SNRK | 0.955 | - | - | - | - | - | 0.955 | Mlig455_017406 {REF} {Length: 4025} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=230.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=142.1]; Kinase-like [PF14531.8, score=32.5]} {Human: ENSG00000163788, SNRK, SNF related kinase, [RH, Score=470, Expect=6e-154]} {Mouse: ENSMUSG00000038145, Snrk, SNF related kinase, [RH, Score=466, Expect=2e-152]} {Dmel: FBgn0033915, CG8485, [RH, Score=446, Expect=8e-144]} {Celegans: WBGene00013994, ZK524.4, [RH, Score=421, Expect=1e-132]} {Smed: dd_Smed_v6_12465_0_1, dd_Smed_v6_12465_0_1, [RH, Score=456, Expect=1e-145]} {RNA1509_12707} {RNA1310_5162} {RNA815_7685} |
| 12. | MligTC455_47889 | 2379 | 49.55 | Mlig455_001724 | Neo: Irradiation Age: Down-Up-Down |
PCYT2 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_001724 {REF} {Length: 2684} {Pfam: Cytidylyltransferase-like [PF01467.28, score=161.4]; FAD synthetase [PF06574.14, score=22.7]} {Human: ENSG00000185813, PCYT2, phosphate cytidylyltransferase 2, ethanolamine, [RH, Score=453, Expect=3e-159]} {Mouse: ENSMUSG00000025137, Pcyt2, phosphate cytidylyltransferase 2, ethanolamine, [RH, Score=454, Expect=5e-160]} {Dmel: FBgn0032482, Pect, Phosphoethanolamine cytidylyltransferase, [RH, Score=445, Expect=1e-156]} {Celegans: WBGene00021352, Y37E3.11, [RH, Score=403, Expect=2e-140]} {Smed: dd_Smed_v6_3373_0_1, dd_Smed_v6_3373_0_1, [RH, Score=395, Expect=1e-137]} {RNA1509_17383, RNA1509_3108} {RNA1310_11318.1, RNA1509_17383, RNA1509_3108} {RNA1509_17383, RNA1509_3108, RNA815_4355.1} |
| 13. | MligTC455_12203 | 8 | 0.17 | Mlig455_061049 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_061049 {REF} {Length: 1492} {RNA1509_16662} {RNA1310_122445} {RNA815_4833.1} |
Berezikov Lab - 2020-2021 © ERIBA