M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_52552

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52552 18866 393.05 Mlig455_060451, Mlig455_060494

Neo: Int S/G2/M

Age: Down-Down-Down, logFC(26M/2M)=9.276

 RPL36

Mlig455_060451 {REF} {Length: 488} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=136.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=118, Expect=2e-35]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=118, Expect=1e-35]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=105, Expect=8e-31]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=101, Expect=4e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=108, Expect=2e-32]} {RNA1509_52420, RNA1509_7567} {RNA1310_72529.3, RNA1509_7567} {RNA1509_7567, RNA815_37483}

Mlig455_060494 {REF} {Length: 490} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=136.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=118, Expect=2e-35]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=118, Expect=1e-35]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=105, Expect=8e-31]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=101, Expect=4e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=108, Expect=2e-32]} {RNA1509_11076, RNA1509_4929, RNA1509_52420, RNA1509_5790} {RNA1310_72529.1, RNA1509_11076, RNA1509_4929, RNA1509_52420, RNA1509_5790} {RNA1509_11076, RNA1509_4929, RNA1509_52420, RNA1509_5790, RNA815_37483}

Cumulative graph for MligTC455_52552

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.009 8.746 0.03353 0.46115
RegionR2 -0.675 8.746 0.09307 0.37448
RegionR3 0.288 8.746 0.39673 0.92663
RegionR4 0.728 8.746 0.04675 0.18430
RegionR5 0.566 8.746 0.08316 0.26921
RegionR6 0.128 8.746 0.70760 1.00000
RegionR7 0.264 8.746 0.42598 1.00000
RegionR8 -0.291 8.746 0.43650 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.562 8.746 0.32940 1.00000
RegenerationR2 -0.46 8.746 0.30309 0.74458
RegenerationR3 -0.581 8.746 0.19786 0.63286
RegenerationR4 -0.539 8.746 0.24028 0.68881
RegenerationR5 -0.11 8.746 0.80599 0.99009
RegenerationR6 -0.439 8.746 0.32957 0.67601
RegenerationBL -0.364 8.746 0.34743 0.71475
RegenerationTP -0.212 8.746 0.61168 0.96755


Genes with expression patterns similar to MligTC455_52552

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52552 18866 393.05 Mlig455_060451, Mlig455_060494

Neo: Int S/G2/M

Age: Down-Down-Down, logFC(26M/2M)=9.276

 RPL36 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_060451 {REF} {Length: 488} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=136.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=118, Expect=2e-35]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=118, Expect=1e-35]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=105, Expect=8e-31]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=101, Expect=4e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=108, Expect=2e-32]} {RNA1509_52420, RNA1509_7567} {RNA1310_72529.3, RNA1509_7567} {RNA1509_7567, RNA815_37483}

Mlig455_060494 {REF} {Length: 490} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=136.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=118, Expect=2e-35]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=118, Expect=1e-35]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=105, Expect=8e-31]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=101, Expect=4e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=108, Expect=2e-32]} {RNA1509_11076, RNA1509_4929, RNA1509_52420, RNA1509_5790} {RNA1310_72529.1, RNA1509_11076, RNA1509_4929, RNA1509_52420, RNA1509_5790} {RNA1509_11076, RNA1509_4929, RNA1509_52420, RNA1509_5790, RNA815_37483}
2. MligTC455_52553 8262 172.13 Mlig455_052410

Neo: Int S/G2/M

Age: -

 RPL36 5.625 0.999 0.998 0.939 0.913 0.965 0.811 Mlig455_052410 {REF} {Length: 489} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=136.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=118, Expect=2e-35]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=118, Expect=1e-35]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=105, Expect=8e-31]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=101, Expect=4e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=108, Expect=2e-32]} {RNA1509_14458, RNA1509_35167, RNA1509_48530, RNA1509_52420} {RNA1310_72529.1, RNA1509_14458, RNA1509_35167, RNA1509_48530} {RNA1509_14458, RNA1509_35167, RNA1509_48530, RNA815_37483}
3. MligTC455_50429 4857 101.19 Mlig455_053964

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.220

 RPL39 3.517 0.783 0.831 - 0.973 - 0.930 Mlig455_053964 {REF} {Length: 321} {TRANSSPLICED} {Pfam: Ribosomal L39 protein [PF00832.22, score=70.5]} {Human: ENSG00000198918, RPL39, ribosomal protein L39, [RH, Score=80.1, Expect=5e-22]} {Mouse: ENSMUSG00000079641, Rpl39, ribosomal protein L39, [RH, Score=80.1, Expect=3e-22]; ENSMUSG00000039209, Rpl39l, ribosomal protein L39-like, [RH, Score=77.0, Expect=7e-21]} {Dmel: FBgn0023170, RpL39, Ribosomal protein L39, [RH, Score=70.1, Expect=2e-18]} {Celegans: WBGene00004453, rpl-39, 60S ribosomal protein L39, [RH, Score=71.6, Expect=4e-19]} {Smed: dd_Smed_v6_67236_0_1, dd_Smed_v6_67236_0_1, [RH, Score=72.0, Expect=3e-19]} {RNA1509_3085, RNA1509_30931} {RNA1310_100169.1, RNA1509_3085, RNA1509_30931} {RNA1509_3085, RNA1509_30931, RNA815_47849}
4. MligTC455_24976 13333 277.77 Mlig455_018655

Neo: -

Age: logFC(26M/2M)=0.335

 RPL35A 3.373 0.706 0.822 - 0.895 - 0.950 Mlig455_018655 {REF} {Length: 512} {TRANSSPLICED} {Pfam: Ribosomal protein L35Ae [PF01247.20, score=148.2]; RimM N-terminal domain [PF01782.20, score=20.4]} {Human: ENSG00000182899, RPL35A, ribosomal protein L35a, [RH, Score=153, Expect=6e-49]} {Mouse: ENSMUSG00000060636, Rpl35a, ribosomal protein L35A, [RH, Score=154, Expect=2e-49]} {Dmel: FBgn0037328, RpL35A, Ribosomal protein L35A, [RH, Score=155, Expect=2e-49]} {Celegans: WBGene00004447, rpl-33, 60S ribosomal protein L35a, [RH, Score=144, Expect=2e-45]} {Smed: dd_Smed_v6_318_0_1, dd_Smed_v6_318_0_1, [RH, Score=158, Expect=4e-51]} {RNA1509_20915, RNA1509_2998, RNA1509_595} {RNA1310_35465, RNA1509_20915, RNA1509_2998, RNA1509_595} {RNA1509_20915, RNA1509_2998, RNA1509_595, RNA815_35386}
5. MligTC455_24977 13312 277.34 Mlig455_018857

Neo: Int S/G2/M

Age: -

 RPL35A 3.372 0.703 0.822 - 0.896 - 0.951 Mlig455_018857 {REF} {Length: 511} {TRANSSPLICED} {Pfam: Ribosomal protein L35Ae [PF01247.20, score=145.7]} {Human: ENSG00000182899, RPL35A, ribosomal protein L35a, [RH, Score=151, Expect=4e-48]} {Mouse: ENSMUSG00000060636, Rpl35a, ribosomal protein L35A, [RH, Score=152, Expect=2e-48]} {Dmel: FBgn0037328, RpL35A, Ribosomal protein L35A, [RH, Score=155, Expect=1e-49]} {Celegans: WBGene00004447, rpl-33, 60S ribosomal protein L35a, [RH, Score=139, Expect=9e-44]} {Smed: dd_Smed_v6_318_0_1, dd_Smed_v6_318_0_1, [RH, Score=154, Expect=2e-49]} {RNA1509_20915} {RNA1310_35465} {RNA815_35386}
6. MligTC455_24688 7408 154.34 Mlig455_016780

Neo: Neoblast

Age: logFC(26M/2M)=0.259

 RPL36 3.331 - 0.751 - 0.973 0.805 0.802 Mlig455_016780 {REF} {Length: 445} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=137.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=122, Expect=4e-37]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=122, Expect=2e-37]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=104, Expect=2e-30]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=100, Expect=9e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=109, Expect=8e-33]} {RNA1509_10713, RNA1509_1282, RNA1509_17623, RNA1509_7903} {RNA1310_78482.1, RNA1509_10713, RNA1509_1282, RNA1509_17623, RNA1509_7903} {RNA1509_10713, RNA1509_1282, RNA1509_17623, RNA1509_7903, RNA815_39095}
7. MligTC455_50768 9424 196.34 Mlig455_021547

Neo: Neoblast

Age: logFC(26M/2M)=0.290

 3.309 - 0.753 - 0.950 0.846 0.760 Mlig455_021547 {REF} {Length: 336} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_10671, RNA1509_28001, RNA1509_31324, RNA1509_7319} {RNA1310_91404.1, RNA1509_10671, RNA1509_28001, RNA1509_31324, RNA1509_7319} {RNA1509_10671, RNA1509_28001, RNA1509_31324, RNA1509_7319, RNA815_47934}
8. MligTC455_21035 5404 112.59 Mlig455_056024

Neo: Int S/G2/M

Age: -

 RPS29 3.256 - 0.737 0.729 0.972 0.818 - Mlig455_056024 {REF} {Length: 374} {TRANSSPLICED} {Pfam: Ribosomal protein S14p/S29e [PF00253.23, score=54.6]} {Human: ENSG00000213741, RPS29, ribosomal protein S29, [RH, Score=82.0, Expect=2e-22]} {Mouse: ENSMUSG00000034892, Rps29, ribosomal protein S29, [RH, Score=82.0, Expect=1e-22]} {Dmel: FBgn0261599, RpS29, Ribosomal protein S29, [RH, Score=97.1, Expect=1e-28]} {Celegans: WBGene00004498, rps-29, Ribosomal Protein, Small subunit, [RH, Score=82.4, Expect=4e-23]} {Smed: dd_Smed_v6_214_0_1, dd_Smed_v6_214_0_1, [RH, Score=91.7, Expect=7e-27]} {RNA1509_2258, RNA1509_42212, RNA1509_712} {RNA1310_95473, RNA1509_2258, RNA1509_42212, RNA1509_712} {RNA1509_2258, RNA1509_42212, RNA1509_712, RNA815_49240}
9. MligTC455_48135 1035 21.56 Mlig455_041301

Neo: -

Age: -

 IMPA1 2.577 0.741 - - 0.962 - 0.874 Mlig455_041301 {REF} {Length: 3809} {Pfam: Inositol monophosphatase family [PF00459.27, score=247.3]} {Human: ENSG00000133731, IMPA1, inositol monophosphatase 1, [RH, Score=254, Expect=3e-83]} {Mouse: ENSMUSG00000027531, Impa1, inositol (myo)-1(or 4)-monophosphatase 1, [RH, Score=249, Expect=2e-82]} {Dmel: FBgn0037063, CG9391, [RH, Score=224, Expect=8e-73]} {Celegans: WBGene00008765, ttx-7, Inositol monophosphatase ttx-7, [RH, Score=254, Expect=1e-84]} {Smed: dd_Smed_v6_5687_0_3, dd_Smed_v6_5687_0_3, [RH, Score=262, Expect=6e-88]} {RNA1509_18515} {RNA1310_29308.1, RNA1509_18515} {RNA1509_18515, RNA815_12923.1}
10. MligTC455_48136 1031 21.48 Mlig455_056203

Neo: -

Age: -

 IMPA1 2.573 0.738 - - 0.960 - 0.875 Mlig455_056203 {REF} {Length: 2937} {Pfam: Inositol monophosphatase family [PF00459.27, score=125.0]} {Human: ENSG00000133731, IMPA1, inositol monophosphatase 1, [Score=105, Expect=1e-26]} {Mouse: ENSMUSG00000024525, Impa2, inositol (myo)-1(or 4)-monophosphatase 2, [Score=106, Expect=1e-27]; ENSMUSG00000027531, Impa1, inositol (myo)-1(or 4)-monophosphatase 1, [Score=101, Expect=8e-26]} {Dmel: FBgn0037063, CG9391, [Score=103, Expect=1e-26]} {Celegans: WBGene00008765, ttx-7, Inositol monophosphatase ttx-7, [Score=110, Expect=2e-29]} {Smed: dd_Smed_v6_3979_0_1, dd_Smed_v6_3979_0_1, [Score=118, Expect=1e-32]} {RNA1509_36639} {RNA1310_25905.1} {RNA815_12923.1}
11. MligTC455_24238 2572 53.58 Mlig455_033548

Neo: Neoblast, stringent

Age: Down-Up-Up, logFC(26M/2M)=0.238

Region-enriched R5: 1.412/0.00009

 NOP10 2.447 - - - 0.963 0.727 0.757 Mlig455_033548 {REF} {Length: 413} {TRANSSPLICED} {Pfam: Nucleolar RNA-binding protein, Nop10p family [PF04135.14, score=81.6]} {Human: ENSG00000182117, NOP10, NOP10 ribonucleoprotein, [RH, Score=95.9, Expect=6e-28]} {Mouse: ENSMUSG00000027133, Nop10, NOP10 ribonucleoprotein, [RH, Score=95.9, Expect=4e-28]} {Dmel: FBgn0033548, CG7637, [RH, Score=89.7, Expect=1e-25]} {Celegans: WBGene00007708, nola-3, Putative H/ACA ribonucleoprotein complex subunit 3, [RH, Score=84.3, Expect=9e-24]} {Smed: dd_Smed_v6_2333_0_1, dd_Smed_v6_2333_0_1, [RH, Score=77.4, Expect=4e-21]} {RNA1509_15741, RNA1509_32331, RNA1509_5449} {RNA1310_82748, RNA1509_15741, RNA1509_32331, RNA1509_5449} {RNA1509_15741, RNA1509_32331, RNA1509_5449, RNA815_28748.1}
12. MligTC455_34147 14536 302.84 Mlig455_010351

Neo: Int S/G2/M

Age: Down-Down-Up

 RPL39 2.399 0.728 0.715 - 0.956 - - Mlig455_010351 {REF} {Length: 345} {TRANSSPLICED} {Pfam: Ribosomal L39 protein [PF00832.22, score=74.4]} {Human: ENSG00000198918, RPL39, ribosomal protein L39, [RH, Score=82.4, Expect=8e-23]} {Mouse: ENSMUSG00000079641, Rpl39, ribosomal protein L39, [RH, Score=82.4, Expect=5e-23]; ENSMUSG00000039209, Rpl39l, ribosomal protein L39-like, [RH, Score=78.6, Expect=1e-21]} {Dmel: FBgn0023170, RpL39, Ribosomal protein L39, [RH, Score=72.4, Expect=3e-19]} {Celegans: WBGene00004453, rpl-39, 60S ribosomal protein L39, [RH, Score=73.6, Expect=8e-20]} {Smed: dd_Smed_v6_67236_0_1, dd_Smed_v6_67236_0_1, [RH, Score=75.5, Expect=1e-20]} {RNA1509_39602} {RNA1310_92891, RNA1509_39602} {RNA1509_39602, RNA815_52027}
13. MligTC455_36383 1523 31.74 Mlig455_005637

Neo: Neoblast

Age: Down-Up-Up

Region-enriched R5: 1.008/0.01518

 1.794 - 0.821 - 0.973 - - Mlig455_005637 {REF} {Length: 370} {TRANSSPLICED} {RNA1509_4492} {RNA1310_87469, RNA1509_4492} {RNA1509_4492, RNA815_48352}
14. MligTC455_28310 14665 305.51 Mlig455_038576

Neo: -

Age: Up-Down-Up

 DBI 1.73 - - - 0.969 0.761 - Mlig455_038576 {REF} {Length: 4553} {Pfam: Acyl CoA binding protein [PF00887.21, score=97.1]} {Human: ENSG00000155368, DBI, diazepam binding inhibitor, acyl-CoA binding protein, [RH, Score=112, Expect=5e-34]; ENSG00000176244, ACBD7, acyl-CoA binding domain containing 7, [RH, Score=108, Expect=4e-32]} {Mouse: ENSMUSG00000026385, Dbi, diazepam binding inhibitor, [RH, Score=112, Expect=5e-34]; ENSMUSG00000026644, Acbd7, acyl-Coenzyme A binding domain containing 7, [RH, Score=107, Expect=8e-32]} {Dmel: FBgn0031992, CG8498, [RH, Score=108, Expect=2e-32]} {Celegans: WBGene00016655, acbp-1, Acyl-CoA-binding protein homolog 1, [RH, Score=99.8, Expect=3e-29]} {Smed: dd_Smed_v6_160_0_1, dd_Smed_v6_160_0_1, [RH, Score=109, Expect=4e-33]} {RNA1509_17069, RNA1509_217, RNA1509_37371, RNA1509_47220, RNA1509_7508, RNA1509_9262} {RNA1310_570.1, RNA1509_17069, RNA1509_217, RNA1509_37371, RNA1509_7508, RNA1509_9262} {RNA1509_17069, RNA1509_217, RNA1509_37371, RNA1509_7508, RNA1509_9262, RNA815_134.1}
15. MligTC455_32716 4106 85.53 Mlig455_020647, Mlig455_051282

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.234

 1.693 - - - 0.956 - 0.737

Mlig455_020647 {REF} {Length: 540} {TRANSSPLICED} {Pfam: ATP synthase regulation [PF14960.8, score=54.0]} {RNA1509_8757} {RNA1310_52206.2, RNA1509_8757} {RNA1509_8757, RNA815_26551.1}

Mlig455_051282 {REF} {Length: 318} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_52253.1} {RNA815_2268.1}
16. MligTC455_13937 387 8.07 Mlig455_028006, Mlig455_028036

Neo: Irradiation

Age: -

Region-enriched R5: 2.460/0.00025

 CDC6 1.664 - - - 0.709 0.955 -

Mlig455_028006 {REF} {Length: 2767} {TRANSSPLICED} {Pfam: CDC6, C terminal winged helix domain [PF09079.13, score=33.5]; AAA domain [PF13401.8, score=28.9]; AAA ATPase domain [PF13191.8, score=26.6]; AAA lid domain [PF17872.3, score=21.5]; AAA domain [PF13245.8, score=21.4]; Type II/IV secretion system protein [PF00437.22, score=19.3]} {Human: ENSG00000094804, CDC6, cell division cycle 6, [Score=110, Expect=3e-25]} {Mouse: ENSMUSG00000017499, Cdc6, cell division cycle 6, [Score=115, Expect=6e-27]} {Dmel: FBgn0035918, Cdc6, [Score=93.6, Expect=5e-20]} {Smed: dd_Smed_v6_18778_0_1, dd_Smed_v6_18778_0_1, [Score=92.4, Expect=5e-20]} {RNA1509_55655} {RNA1310_35548} {RNA815_7333.1}

Mlig455_028036 {REF} {Length: 3756} {TRANSSPLICED} {Pfam: AAA domain [PF13401.8, score=42.2]; AAA ATPase domain [PF13191.8, score=37.7]; CDC6, C terminal winged helix domain [PF09079.13, score=33.9]; AAA domain [PF13245.8, score=27.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=24.5]; AAA lid domain [PF17872.3, score=21.2]; NACHT domain [PF05729.14, score=20.3]; Type II/IV secretion system protein [PF00437.22, score=18.2]} {Human: ENSG00000094804, CDC6, cell division cycle 6, [Score=132, Expect=2e-32]} {Mouse: ENSMUSG00000017499, Cdc6, cell division cycle 6, [Score=138, Expect=1e-34]} {Dmel: FBgn0035918, Cdc6, [Score=116, Expect=2e-27]} {Celegans: WBGene00000382, cdc-6, Cell Division Cycle related, [Score=112, Expect=2e-26]} {Smed: dd_Smed_v6_18778_0_1, dd_Smed_v6_18778_0_1, [Score=116, Expect=5e-28]} {RNA1509_16975, RNA1509_55655} {RNA1310_16898.1, RNA1509_16975, RNA1509_55655} {RNA1509_16975, RNA1509_55655, RNA815_7333.1}
17. MligTC455_46486 551 11.48 Mlig455_066638

Neo: -

Age: -

 0.976 - - - 0.976 - - Mlig455_066638 {REF} {Length: 435} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=21.5]} {Dmel: FBgn0259718, CG42372, [RH, Score=43.9, Expect=1e-07]} {RNA1509_6986} {RNA1310_67400} {RNA815_43142}
18. MligTC455_42835 1755 36.55 Mlig455_031608

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.276

Region-enriched R5: 1.084/0.00179

 MRPS21 0.968 - - - 0.968 - - Mlig455_031608 {REF} {Length: 472} {TRANSSPLICED} {Pfam: Ribosomal protein S21 [PF01165.22, score=23.3]} {Human: ENSG00000266472, MRPS21, mitochondrial ribosomal protein S21, [RH, Score=81.6, Expect=2e-21]} {Mouse: ENSMUSG00000054312, Mrps21, mitochondrial ribosomal protein S21, [RH, Score=79.0, Expect=2e-20]} {Dmel: FBgn0044511, mRpS21, mitochondrial ribosomal protein S21, [RH, Score=67.4, Expect=5e-16]} {Celegans: WBGene00017924, mrps-21, Mitochondrial Ribosomal Protein, Small, [RH, Score=46.6, Expect=8e-08]} {Smed: dd_Smed_v6_1993_0_1, dd_Smed_v6_1993_0_1, [RH, Score=88.6, Expect=2e-24]} {RNA1509_15940, RNA1509_19347} {RNA1310_61090, RNA1509_15940, RNA1509_19347} {RNA1509_15940, RNA1509_19347, RNA815_37726}
19. MligTC455_36596 1599 33.32 Mlig455_008350

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.322

Region-enriched R2: 1.280/0.03174

Regeneration-upregulated R4: 1.613

Regeneration-enriched R4: 1.613

 EIF3A 0.967 - - - - - 0.967 Mlig455_008350 {REF} {Length: 4536} {TRANSSPLICED} {Pfam: PCI domain [PF01399.29, score=27.5]} {Human: ENSG00000107581, EIF3A, eukaryotic translation initiation factor 3 subunit A, [RH, Score=659, Expect=0.0]} {Mouse: ENSMUSG00000024991, Eif3a, eukaryotic translation initiation factor 3, subunit A, [RH, Score=661, Expect=0.0]} {Dmel: FBgn0037249, eIF3a, eukaryotic translation initiation factor 3 subunit a, [RH, Score=545, Expect=2e-174]} {Celegans: WBGene00001209, egl-45, Eukaryotic translation initiation factor 3 subunit A, [RH, Score=439, Expect=2e-135]} {Smed: dd_Smed_v6_804_0_1, dd_Smed_v6_804_0_1, [RH, Score=546, Expect=8e-178]} {RNA1509_55840, RNA1509_747} {RNA1310_2722, RNA1509_55840, RNA1509_747} {RNA1509_55840, RNA1509_747, RNA815_884}
20. MligTC455_52358 639 13.32 Mlig455_018941

Neo: Irradiation

Age: -

Regeneration-upregulated BL: 1.992

Regeneration-enriched BL: 1.992

 NOP58 0.957 - - - - - 0.957 Mlig455_018941 {REF} {Length: 2084} {Pfam: snoRNA binding domain, fibrillarin [PF01798.20, score=201.1]} {Human: ENSG00000055044, NOP58, NOP58 ribonucleoprotein, [Score=253, Expect=1e-79]} {Mouse: ENSMUSG00000026020, Nop58, NOP58 ribonucleoprotein, [Score=248, Expect=7e-78]} {Dmel: FBgn0026196, nop5, [Score=247, Expect=1e-77]} {Celegans: WBGene00020915, nol-5, NucleOLar protein, [Score=242, Expect=2e-76]} {Smed: dd_Smed_v6_1982_0_1, dd_Smed_v6_1982_0_1, [Score=245, Expect=3e-78]} {RNA1509_12712} {RNA1310_14695.1} {RNA815_10853}
21. MligTC455_28844 209 4.36 Mlig455_026968

Neo: Neoblast

Age: logFC(26M/2M)=3.622

 TIMM9 0.955 - - - 0.955 - - Mlig455_026968 {REF} {Length: 414} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=61.8]} {Human: ENSG00000100575, TIMM9, translocase of inner mitochondrial membrane 9, [RH, Score=66.6, Expect=2e-15]} {Mouse: ENSMUSG00000021079, Timm9, translocase of inner mitochondrial membrane 9, [RH, Score=64.3, Expect=9e-15]} {Dmel: FBgn0030480, Tim9a, [Score=72.4, Expect=5e-18]} {Celegans: WBGene00006572, tin-9.1, Mitochondrial import inner membrane translocase subunit Tim9, [Score=68.2, Expect=1e-16]} {RNA1509_11671} {RNA1310_55374} {RNA815_44171}
22. MligTC455_35244 2517 52.43 Mlig455_053709

Neo: Neoblast

Age: -

Regeneration-upregulated BL: 1.339

Regeneration-enriched BL: 1.339

 PSMD1 0.955 - - - - - 0.955 Mlig455_053709 {REF} {Length: 4047} {Pfam: 26S proteasome regulatory subunit RPN2 C-terminal domain [PF18004.3, score=151.1]; Proteasome/cyclosome repeat [PF01851.24, score=116.8]; HEAT repeats [PF13646.8, score=67.8]; HEAT repeat [PF02985.24, score=24.8]} {Human: ENSG00000173692, PSMD1, proteasome 26S subunit, non-ATPase 1, [RH, Score=1039, Expect=0.0]} {Mouse: ENSMUSG00000026229, Psmd1, proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, [RH, Score=1039, Expect=0.0]} {Dmel: FBgn0028692, Rpn2, Regulatory particle non-ATPase 2, [RH, Score=1016, Expect=0.0]} {Celegans: WBGene00004459, rpn-2, 26S proteasome non-ATPase regulatory subunit 1, [RH, Score=461, Expect=9e-146]} {Smed: dd_Smed_v6_1149_0_1, dd_Smed_v6_1149_0_1, [RH, Score=1048, Expect=0.0]} {RNA1509_727} {RNA1310_2240.1, RNA1509_727} {RNA1509_727, RNA815_171.1}
23. MligTC455_28867 1479 30.82 Mlig455_064086

Neo: Neoblast

Age: -

 LSM2 0.954 - - - - - 0.954 Mlig455_064086 {REF} {Length: 1397} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=59.3]} {Human: ENSG00000172850, LSM2, LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=171, Expect=2e-56]; ENSG00000236826, LSM2, LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=171, Expect=2e-56]; ENSG00000225998, LSM2, LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=171, Expect=2e-56]; ENSG00000224979, LSM2, LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=171, Expect=2e-56]; ENSG00000231502, LSM2, LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=171, Expect=2e-56]; ENSG00000204392, LSM2, LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=171, Expect=2e-56]} {Mouse: ENSMUSG00000007050, Lsm2, LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=171, Expect=1e-56]} {Dmel: FBgn0036277, CG10418, [RH, Score=164, Expect=7e-54]} {Celegans: WBGene00001808, gut-2, [RH, Score=152, Expect=3e-49]} {Smed: dd_Smed_v6_5318_0_1, dd_Smed_v6_5318_0_1, [RH, Score=143, Expect=7e-46]} {RNA1509_14830, RNA1509_21331, RNA1509_32260, RNA1509_50366} {RNA1310_38709, RNA1509_14830, RNA1509_21331, RNA1509_32260, RNA1509_50366} {RNA1509_14830, RNA1509_21331, RNA1509_32260, RNA1509_50366, RNA815_25393}
24. MligTC455_18390 856 17.84 Mlig455_041422

Neo: -

Age: -

Region-enriched R5: 1.353/0.00136

 EMC8 0.953 - - - 0.953 - - Mlig455_041422 {REF} {Length: 2090} {TRANSSPLICED} {Pfam: Uncharacterised protein family (UPF0172) [PF03665.15, score=171.9]} {Human: ENSG00000131148, EMC8, ER membrane protein complex subunit 8, [RH, Score=127, Expect=2e-36]; ENSG00000285377, EMC9, ER membrane protein complex subunit 9, [RH, Score=123, Expect=8e-35]; ENSG00000100908, EMC9, ER membrane protein complex subunit 9, [RH, Score=123, Expect=8e-35]} {Mouse: ENSMUSG00000031819, Emc8, ER membrane protein complex subunit 8, [RH, Score=128, Expect=6e-37]; ENSMUSG00000022217, Emc9, ER membrane protein complex subunit 9, [RH, Score=128, Expect=5e-37]} {Dmel: FBgn0034791, EMC8-9, ER Membrane protein Complex 8-9, [RH, Score=110, Expect=5e-30]} {Celegans: WBGene00009118, F25H2.4, [RH, Score=67.0, Expect=1e-13]} {Smed: dd_Smed_v6_5425_0_1, dd_Smed_v6_5425_0_1, [RH, Score=125, Expect=4e-36]} {RNA1509_24242} {RNA1310_31036.1} {RNA815_19165}
25. MligTC455_19409 2981 62.11 Mlig455_056289, Mlig455_056315

Neo: Neoblast

Age: logFC(26M/2M)=0.246

 LSM4 0.953 - - - - - 0.953

Mlig455_056289 {REF} {Length: 975} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=58.7]} {Human: ENSG00000130520, LSM4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=164, Expect=3e-51]} {Mouse: ENSMUSG00000031848, Lsm4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=162, Expect=6e-52]; ENSMUSG00000110900, Lsm4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=162, Expect=6e-52]} {Dmel: FBgn0032240, CG17768, [RH, Score=163, Expect=3e-52]} {Celegans: WBGene00003078, lsm-4, Probable U6 snRNA-associated Sm-like protein LSm4, [RH, Score=130, Expect=6e-40]} {Smed: dd_Smed_v6_2440_0_1, dd_Smed_v6_2440_0_1, [RH, Score=113, Expect=7e-33]} {RNA1509_15803, RNA1509_8523} {RNA1310_35821.1, RNA1509_15803, RNA1509_8523} {RNA1509_15803, RNA1509_8523, RNA815_28519}

Mlig455_056315 {REF} {Length: 939} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=58.9]} {Human: ENSG00000130520, LSM4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=163, Expect=7e-51]} {Mouse: ENSMUSG00000031848, Lsm4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=161, Expect=1e-51]; ENSMUSG00000110900, Lsm4, LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=161, Expect=1e-51]} {Dmel: FBgn0032240, CG17768, [RH, Score=162, Expect=7e-52]} {Celegans: WBGene00003078, lsm-4, Probable U6 snRNA-associated Sm-like protein LSm4, [RH, Score=130, Expect=7e-40]} {Smed: dd_Smed_v6_2440_0_1, dd_Smed_v6_2440_0_1, [RH, Score=122, Expect=1e-36]} {RNA1509_22792} {RNA1310_35821.1, RNA1509_22792} {RNA1509_22792, RNA815_28519}
26. MligTC455_40445 1162 24.2 Mlig455_052733

Neo: Int S/G2/M

Age: -

 SPCS3 0.952 - - - 0.952 - - Mlig455_052733 {REF} {Length: 2027} {TRANSSPLICED} {Pfam: Signal peptidase subunit [PF04573.14, score=132.4]} {Human: ENSG00000129128, SPCS3, signal peptidase complex subunit 3, [RH, Score=119, Expect=6e-35]} {Mouse: ENSMUSG00000048040, Arxes2, adipocyte-related X-chromosome expressed sequence 2, [RH, Score=119, Expect=2e-35]; ENSMUSG00000048355, Arxes1, adipocyte-related X-chromosome expressed sequence 1, [RH, Score=119, Expect=2e-35]; ENSMUSG00000054408, Spcs3, signal peptidase complex subunit 3 homolog (S. cerevisiae), [RH, Score=119, Expect=4e-35]} {Dmel: FBgn0039172, Spase22-23, Spase 22/23-subunit, [RH, Score=126, Expect=3e-38]} {Celegans: WBGene00019679, K12H4.4, Probable signal peptidase complex subunit 3, [RH, Score=108, Expect=5e-31]} {Smed: dd_Smed_v6_1712_0_1, dd_Smed_v6_1712_0_1, [RH, Score=150, Expect=1e-47]} {RNA1509_14754, RNA1509_20045, RNA1509_27630} {RNA1310_20955.1, RNA1509_14754, RNA1509_20045, RNA1509_27630} {RNA1509_14754, RNA1509_20045, RNA1509_27630, RNA815_15984.1}
27. MligTC455_41779 1714 35.71 Mlig455_047512

Neo: Neoblast, stringent

Age: Up-Down-Up

Region-enriched R5: 1.190/0.00563

 DKC1 0.951 - - - - - 0.951 Mlig455_047512 {REF} {Length: 2101} {TRANSSPLICED} {Pfam: DKCLD (NUC011) domain [PF08068.14, score=108.8]; TruB family pseudouridylate synthase (N terminal domain) [PF01509.20, score=74.9]; tRNA pseudouridylate synthase B C-terminal domain [PF16198.7, score=60.8]; PUA domain [PF01472.22, score=56.9]} {Human: ENSG00000130826, DKC1, dyskerin pseudouridine synthase 1, [Score=542, Expect=0.0]} {Mouse: ENSMUSG00000031403, Dkc1, dyskeratosis congenita 1, dyskerin, [Score=543, Expect=0.0]} {Dmel: FBgn0259937, Nop60B, Nucleolar protein at 60B, [Score=571, Expect=0.0]} {Celegans: WBGene00010478, K01G5.5, Putative H/ACA ribonucleoprotein complex subunit 4, [Score=514, Expect=0.0]} {Smed: dd_Smed_v6_4087_0_1, dd_Smed_v6_4087_0_1, [Score=440, Expect=7e-153]} {RNA1509_2479} {RNA1310_14344.1} {RNA815_5205}
28. MligTC455_29363 1618 33.7 Mlig455_025583, Mlig455_060624

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.521

Regeneration-upregulated R6: 1.633

Regeneration-enriched R6: 1.633

 HCCS 0.95 - - - - - 0.950

Mlig455_025583 {REF} {Length: 1669} {TRANSSPLICED} {Pfam: Cytochrome c/c1 heme lyase [PF01265.19, score=230.3]} {Human: ENSG00000004961, HCCS, holocytochrome c synthase, [RH, Score=256, Expect=7e-85]} {Mouse: ENSMUSG00000031352, Hccs, holocytochrome c synthetase, [RH, Score=266, Expect=7e-89]} {Dmel: FBgn0038925, Cchl, Cytochrome c heme lyase, [RH, Score=297, Expect=4e-101]} {Celegans: WBGene00011527, cchl-1, Probable cytochrome c-type heme lyase, [RH, Score=233, Expect=3e-76]} {Smed: dd_Smed_v6_2573_0_1, dd_Smed_v6_2573_0_1, [RH, Score=269, Expect=2e-90]} {RNA1509_4296} {RNA1310_16872} {RNA815_7646.1}

Mlig455_060624 {REF} {Length: 1659} {TRANSSPLICED} {Pfam: Cytochrome c/c1 heme lyase [PF01265.19, score=230.3]} {Human: ENSG00000004961, HCCS, holocytochrome c synthase, [RH, Score=256, Expect=7e-85]} {Mouse: ENSMUSG00000031352, Hccs, holocytochrome c synthetase, [RH, Score=266, Expect=7e-89]} {Dmel: FBgn0038925, Cchl, Cytochrome c heme lyase, [RH, Score=297, Expect=4e-101]} {Celegans: WBGene00011527, cchl-1, Probable cytochrome c-type heme lyase, [RH, Score=233, Expect=3e-76]} {Smed: dd_Smed_v6_2573_0_1, dd_Smed_v6_2573_0_1, [RH, Score=269, Expect=2e-90]} {RNA1509_17106, RNA1509_37169, RNA1509_4296} {RNA1310_16872, RNA1509_17106, RNA1509_37169} {RNA1509_17106, RNA1509_37169, RNA815_7646.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA