TomoSeq data search

Data search

Results for MligTC455_48257

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48257

51

1.07

Mlig455_020980

Neo: -

Age: -

VAV3

Mlig455_020980 {REF} {Length: 3664} {Pfam: Calponin homology (CH) domain [PF00307.33, score=41.6]; RhoGEF domain [PF00621.22, score=39.8]; SH2 domain [PF00017.26, score=27.7]; CAMSAP CH domain [PF11971.10, score=20.9]} {Human: ENSG00000134215, VAV3, vav guanine nucleotide exchange factor 3, [Score=135, Expect=5e-32]; ENSG00000160293, VAV2, vav guanine nucleotide exchange factor 2, [Score=134, Expect=1e-31]} {Mouse: ENSMUSG00000009621, Vav2, vav 2 oncogene, [Score=134, Expect=8e-32]; ENSMUSG00000033721, Vav3, vav 3 oncogene, [Score=132, Expect=3e-31]} {Celegans: WBGene00006887, vav-1, [Score=107, Expect=9e-24]} {Smed: dd_Smed_v6_6109_0_1, dd_Smed_v6_6109_0_1, [Score=97.1, Expect=1e-20]} {RNA1310_24185} {RNA815_29420}

Cumulative graph for MligTC455_48257

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.691	1.335	1.00000	1.00000
RegionR2	-0.594	1.335	0.81610	1.00000
RegionR3	0.902	1.335	0.46555	0.97326
RegionR4	2.506	1.335	0.11484	0.33705
RegionR5	2.308	1.335	0.06961	0.23731
RegionR6	2.162	1.335	0.10875	0.60223
RegionR7	-2.597	1.335	0.99965	1.00000
RegionR8	-1.996	1.335	0.99964	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.22	1.335	1.00000	1.00000
RegenerationR2	1.009	1.335	0.26927	0.71507
RegenerationR3	0.617	1.335	0.58774	0.90273
RegenerationR4	0.093	1.335	0.91179	1.00000
RegenerationR5	-1.191	1.335	0.21695	0.65178
RegenerationR6	-0.155	1.335	0.83366	0.99302
RegenerationBL	2.071	1.335	0.28088	0.64204
RegenerationTP	3.049	1.335	0.25054	0.69757

Genes with expression patterns similar to MligTC455_48257

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48257	51	1.07	Mlig455_020980	Neo: - Age: -	VAV3	3	-	-	-	1.000	1.000	1.000	Mlig455_020980 {REF} {Length: 3664} {Pfam: Calponin homology (CH) domain [PF00307.33, score=41.6]; RhoGEF domain [PF00621.22, score=39.8]; SH2 domain [PF00017.26, score=27.7]; CAMSAP CH domain [PF11971.10, score=20.9]} {Human: ENSG00000134215, VAV3, vav guanine nucleotide exchange factor 3, [Score=135, Expect=5e-32]; ENSG00000160293, VAV2, vav guanine nucleotide exchange factor 2, [Score=134, Expect=1e-31]} {Mouse: ENSMUSG00000009621, Vav2, vav 2 oncogene, [Score=134, Expect=8e-32]; ENSMUSG00000033721, Vav3, vav 3 oncogene, [Score=132, Expect=3e-31]} {Celegans: WBGene00006887, vav-1, [Score=107, Expect=9e-24]} {Smed: dd_Smed_v6_6109_0_1, dd_Smed_v6_6109_0_1, [Score=97.1, Expect=1e-20]} {RNA1310_24185} {RNA815_29420}
2.	MligTC455_48256	51	1.07	Mlig455_007665	Neo: - Age: Down-Up-Down		2.545	-	-	-	0.816	0.755	0.974	Mlig455_007665 {REF} {Length: 4291} {Pfam: EF-hand domain pair [PF13833.8, score=30.9]; EF hand [PF00036.34, score=25.2]; EF-hand domain pair [PF13499.8, score=21.4]; RhoGEF domain [PF00621.22, score=21.0]; EF hand [PF13202.8, score=18.1]} {RNA1509_8417} {RNA1310_24185} {RNA815_18042.1}
3.	MligTC455_51774	143	2.99	Mlig455_020123	Neo: - Age: - Region-enriched R6: 2.569/0.02780	POU3F3	1.83	-	-	-	-	0.870	0.960	Mlig455_020123 {REF} {Length: 5804} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=128.2]; Homeodomain [PF00046.31, score=64.9]} {Human: ENSG00000198914, POU3F3, POU class 3 homeobox 3, [RH, Score=291, Expect=1e-91]; ENSG00000184486, POU3F2, POU class 3 homeobox 2, [RH, Score=288, Expect=5e-91]; ENSG00000196767, POU3F4, POU class 3 homeobox 4, [RH, Score=286, Expect=1e-91]; ENSG00000185668, POU3F1, POU class 3 homeobox 1, [RH, Score=284, Expect=2e-89]} {Mouse: ENSMUSG00000045515, Pou3f3, POU domain, class 3, transcription factor 3, [RH, Score=291, Expect=7e-92]; ENSMUSG00000095139, Pou3f2, POU domain, class 3, transcription factor 2, [RH, Score=288, Expect=4e-91]; ENSMUSG00000056854, Pou3f4, POU domain, class 3, transcription factor 4, [RH, Score=287, Expect=6e-92]; ENSMUSG00000090125, Pou3f1, POU domain, class 3, transcription factor 1, [RH, Score=283, Expect=2e-89]} {Dmel: FBgn0086680, vvl, ventral veins lacking, [RH, Score=293, Expect=5e-90]} {Celegans: WBGene00000431, ceh-6, Homeobox protein ceh-6, [RH, Score=247, Expect=2e-76]} {Smed: dd_Smed_v6_8234_0_1, dd_Smed_v6_8234_0_1, [RH, Score=270, Expect=1e-84]} {RNA1509_24966} {RNA1310_6220} {RNA815_1267}
4.	MligTC455_51845	96	2	Mlig455_059142, Mlig455_059399	Neo: - Age: logFC(26M/2M)=-0.396 Region-enriched R2: 5.680/0.00160 Region-enriched R6: 3.659/0.03177		1.804	-	-	-	-	0.838	0.966	Mlig455_059142 {REF} {Length: 2210} {Smed: dd_Smed_v6_5005_0_1, dd_Smed_v6_5005_0_1, [RH, Score=56.6, Expect=7e-09]} {RNA1509_39386} {RNA1310_8311.1} {RNA815_22938} Mlig455_059399 {REF} {Length: 2939} {Smed: dd_Smed_v6_5005_0_1, dd_Smed_v6_5005_0_1, [RH, Score=58.9, Expect=4e-09]} {RNA1509_39386} {RNA1310_8311.1, RNA1509_39386} {RNA1509_39386, RNA815_22938}
5.	MligTC455_47777	370	7.7	Mlig455_053822	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.538		1.671	-	-	-	-	0.716	0.955	Mlig455_053822 {REF} {Length: 4445} {Pfam: FLYWCH zinc finger domain [PF04500.18, score=24.1]} {Smed: dd_Smed_v6_3827_0_1, dd_Smed_v6_3827_0_1, [RH, Score=80.1, Expect=1e-15]} {RNA1509_9507} {RNA1310_5230} {RNA815_14628}
6.	MligTC455_19252	1355	28.24	Mlig455_054908, Mlig455_065614, Mlig455_065623	Neo: - Age: Down-Down-Up Region-enriched R2: 4.927/0.00706	QPCT	1.662	-	-	-	-	0.711	0.951	Mlig455_054908 {REF} {Length: 1427} {Pfam: Peptidase family M28 [PF04389.19, score=84.4]} {Human: ENSG00000115828, QPCT, glutaminyl-peptide cyclotransferase, [Score=113, Expect=3e-28]} {Mouse: ENSMUSG00000030407, Qpctl, glutaminyl-peptide cyclotransferase-like, [Score=123, Expect=8e-32]} {Dmel: FBgn0052412, QC, Glutaminyl cyclase, [Score=116, Expect=7e-30]} {Celegans: WBGene00010418, H27A22.1, [Score=124, Expect=6e-33]} {Smed: dd_Smed_v6_4861_0_1, dd_Smed_v6_4861_0_1, [Score=118, Expect=1e-30]} {RNA1509_35784} {RNA1310_28475} Mlig455_065614 {REF} {Length: 1515} {Pfam: Peptidase family M28 [PF04389.19, score=121.0]} {Human: ENSG00000115828, QPCT, glutaminyl-peptide cyclotransferase, [Score=157, Expect=2e-44]} {Mouse: ENSMUSG00000024084, Qpct, glutaminyl-peptide cyclotransferase (glutaminyl cyclase), [Score=162, Expect=2e-46]; ENSMUSG00000030407, Qpctl, glutaminyl-peptide cyclotransferase-like, [Score=161, Expect=6e-46]} {Dmel: FBgn0052412, QC, Glutaminyl cyclase, [Score=158, Expect=2e-45]} {Celegans: WBGene00010418, H27A22.1, [Score=166, Expect=2e-48]} {Smed: dd_Smed_v6_4861_0_1, dd_Smed_v6_4861_0_1, [Score=156, Expect=2e-44]} {RNA1509_35784} {RNA1310_28475, RNA1509_35784} Mlig455_065623 {REF} {Length: 1295} {Pfam: Peptidase family M28 [PF04389.19, score=121.4]} {Human: ENSG00000115828, QPCT, glutaminyl-peptide cyclotransferase, [Score=158, Expect=6e-45]} {Mouse: ENSMUSG00000030407, Qpctl, glutaminyl-peptide cyclotransferase-like, [Score=162, Expect=2e-46]; ENSMUSG00000024084, Qpct, glutaminyl-peptide cyclotransferase (glutaminyl cyclase), [Score=161, Expect=3e-46]} {Dmel: FBgn0052412, QC, Glutaminyl cyclase, [Score=154, Expect=8e-44]} {Celegans: WBGene00010418, H27A22.1, [Score=163, Expect=2e-47]} {Smed: dd_Smed_v6_4861_0_1, dd_Smed_v6_4861_0_1, [Score=154, Expect=8e-44]} {RNA1509_35784} {RNA1310_28475}
7.	MligTC455_16079	136	2.84	Mlig455_042498	Neo: - Age: logFC(26M/2M)=0.797		0.976	-	-	-	-	-	0.976	Mlig455_042498 {REF} {Length: 2366} {RNA1509_55486} {RNA1310_26714.2, RNA1509_55486} {RNA1509_55486, RNA815_22393}
8.	MligTC455_48469	965	20.1	Mlig455_031190	Neo: Neoblast, stringent Age: Down-Up-Up, logFC(26M/2M)=0.385 Region-enriched R6: 2.050/0.04742		0.956	-	-	-	-	-	0.956	Mlig455_031190 {REF} {Length: 833} {RNA1509_48558, RNA1509_57015} {RNA1310_39209, RNA1509_48558} {RNA1509_48558, RNA815_16251.2}
9.	MligTC455_12236	60	1.26	Mlig455_048744	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_048744 {REF} {Length: 785} {NoTransDecoderORF} {RNA1509_30946} {RNA1310_87811} {RNA815_14080}

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