Data search
Results for MligTC455_12236
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_12236 | 60 | 1.26 | Mlig455_048744 | Neo: - Age: - |
Mlig455_048744 {REF} {Length: 785} {NoTransDecoderORF} {RNA1509_30946} {RNA1310_87811} {RNA815_14080} |
Cumulative graph for MligTC455_12236
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.229 | 1.074 | 0.49435 | 1.00000 | |
| RegionR2 | 2.321 | 1.074 | 0.12329 | 0.43488 | |
| RegionR3 | -2.123 | 1.074 | 0.99988 | 1.00000 | |
| RegionR4 | -0.663 | 1.074 | 0.73757 | 1.00000 | |
| RegionR5 | 0.971 | 1.074 | 0.24679 | 0.56092 | |
| RegionR6 | 2.961 | 1.074 | 0.00778 | 0.14373 | |
| RegionR7 | -2.324 | 1.074 | 1.00000 | 1.00000 | |
| RegionR8 | -2.373 | 1.074 | 0.99977 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.023 | 1.074 | 0.68543 | 1.00000 | |
| RegenerationR2 | 0.697 | 1.074 | 0.59031 | 0.91143 | |
| RegenerationR3 | 5.685 | 1.074 | 0.00038 | 0.02748 | |
| RegenerationR4 | 2.256 | 1.074 | 0.07551 | 0.43675 | |
| RegenerationR5 | 1.817 | 1.074 | 0.07273 | 0.42322 | |
| RegenerationR6 | 1.465 | 1.074 | 0.16394 | 0.49362 | |
| RegenerationBL | 3.326 | 1.074 | 0.14322 | 0.45121 | |
| RegenerationTP | 4.568 | 1.074 | 0.11298 | 0.51625 |
Genes with expression patterns similar to MligTC455_12236
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_12236 | 60 | 1.26 | Mlig455_048744 | Neo: - Age: - |
2 | - | - | - | - | 1.000 | 1.000 | Mlig455_048744 {REF} {Length: 785} {NoTransDecoderORF} {RNA1509_30946} {RNA1310_87811} {RNA815_14080} | |
| 2. | MligTC455_41109 | 212 | 4.42 | Mlig455_044541, Mlig455_068558 | Neo: - Age: Down-Down-Up |
0.98 | - | - | - | - | - | 0.980 | Mlig455_044541 {REF} {Length: 2618} {RNA1509_50994} {RNA1310_14102} {RNA815_21266} Mlig455_068558 {REF} {Length: 2571} {RNA1509_50994} {RNA1310_14102} {RNA815_21266} |
|
| 3. | MligTC455_26512 | 128 | 2.67 | Mlig455_069089 | Neo: - Age: Up-Down-Down |
PRKDC | 0.972 | - | - | - | - | - | 0.972 | Mlig455_069089 {REF} {Length: 15905} {Pfam: NUC194 domain [PF08163.14, score=230.9]; DNA-PKcs, CC5 [PF19704.1, score=218.9]; Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=139.7]; FAT domain [PF02259.25, score=33.6]; FATC domain [PF02260.22, score=27.0]; DDE superfamily endonuclease [PF13358.8, score=24.7]; Helix-turn-helix domain [PF13518.8, score=22.8]} {Human: ENSG00000253729, PRKDC, protein kinase, DNA-activated, catalytic subunit, [Score=652, Expect=0.0]} {Mouse: ENSMUSG00000022672, Prkdc, protein kinase, DNA activated, catalytic polypeptide, [Score=624, Expect=1e-178]} {Dmel: FBgn0021796, Tor, Target of rapamycin, [Score=152, Expect=8e-36]} {Celegans: WBGene00002583, let-363, Target of rapamycin homolog, [Score=149, Expect=3e-35]} {Smed: dd_Smed_v6_8462_0_2, dd_Smed_v6_8462_0_2, [RH, Score=284, Expect=5e-76]} {RNA1509_11402, RNA1509_47977, RNA1509_60024} {RNA1310_372, RNA1509_47977, RNA1509_60024} {RNA1509_47977, RNA1509_60024, RNA815_3968} |
| 4. | MligTC455_22201 | 892 | 18.59 | Mlig455_045089 | Neo: - Age: - Region-enriched R7: 1.426/0.02956 Regeneration-upregulated BL: 1.589 Regeneration-enriched BL: 1.589 |
TLL1 | 0.97 | - | - | - | - | - | 0.970 | Mlig455_045089 {REF} {Length: 3960} {Pfam: CUB domain [PF00431.22, score=500.8]; Astacin (Peptidase family M12A) [PF01400.26, score=226.0]; Coagulation Factor Xa inhibitory site [PF14670.8, score=57.7]; Calcium-binding EGF domain [PF07645.17, score=41.2]; Complement Clr-like EGF-like [PF12662.9, score=32.2]; EGF domain [PF12947.9, score=24.5]; CUB-like domain [PF02408.22, score=24.0]; Human growth factor-like EGF [PF12661.9, score=21.4]; EGF-like domain [PF00008.29, score=20.3]} {Human: ENSG00000038295, TLL1, tolloid like 1, [RH, Score=877, Expect=0.0]; ENSG00000095587, TLL2, tolloid like 2, [RH, Score=876, Expect=0.0]; ENSG00000168487, BMP1, bone morphogenetic protein 1, [RH, Score=865, Expect=0.0]} {Mouse: ENSMUSG00000025013, Tll2, tolloid-like 2, [RH, Score=881, Expect=0.0]; ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [RH, Score=867, Expect=0.0]; ENSMUSG00000053626, Tll1, tolloid-like, [RH, Score=863, Expect=0.0]} {Dmel: FBgn0004885, tok, tolkin, [RH, Score=864, Expect=0.0]} {Celegans: WBGene00003555, nas-39, Zinc metalloproteinase nas-39, [RH, Score=716, Expect=0.0]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [RH, Score=888, Expect=0.0]} {RNA1509_7883} {RNA1310_2749, RNA1509_7883} {RNA1509_7883, RNA815_1455} |
| 5. | MligTC455_32089 | 32 | 0.66 | Mlig455_040995 | Neo: - Age: - |
0.968 | - | - | - | - | - | 0.968 | Mlig455_040995 {REF} {Length: 754} {NoTransDecoderORF} {RNA1509_49715} {RNA1310_24655} {RNA815_31399} | |
| 6. | MligTC455_51337 | 178 | 3.71 | Mlig455_037475 | Neo: - Age: - |
IARS2 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_037475 {REF} {Length: 3731} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=453.9]; tRNA synthetases class I (M) [PF09334.13, score=66.0]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=47.6]; Leucyl-tRNA synthetase, Domain 2 [PF13603.8, score=24.7]} {Human: ENSG00000067704, IARS2, isoleucyl-tRNA synthetase 2, mitochondrial, [RH, Score=553, Expect=0.0]} {Mouse: ENSMUSG00000026618, Iars2, isoleucine-tRNA synthetase 2, mitochondrial, [RH, Score=556, Expect=0.0]} {Dmel: FBgn0036569, IleRS-m, Isoleucyl-tRNA synthetase, mitochondrial, [RH, Score=510, Expect=3e-165]} {Celegans: WBGene00002153, iars-2, Isoleucyl Amino-acyl tRNA Synthetase, [RH, Score=462, Expect=4e-147]} {Smed: dd_Smed_v6_7613_0_1, dd_Smed_v6_7613_0_1, [RH, Score=529, Expect=1e-172]} {RNA1509_14916} {RNA1310_3724, RNA1509_14916} {RNA1509_14916, RNA815_38112} |
| 7. | MligTC455_22549 | 36 | 0.74 | Mlig455_057952 | Neo: - Age: - |
0.964 | - | - | - | - | - | 0.964 | Mlig455_057952 {REF} {Length: 391} {RNA1310_54013.1} {RNA815_47584} | |
| 8. | MligTC455_50019 | 248 | 5.17 | Mlig455_050542 | Neo: Int S/G2/M Age: Up-Up-Down |
NSD2 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_050542 {REF} {Length: 4778} {TRANSSPLICED} {Pfam: PWWP domain [PF00855.19, score=113.6]; SET domain [PF00856.30, score=80.1]; AWS domain [PF17907.3, score=47.6]; PHD-finger [PF00628.31, score=38.8]; NSD Cys-His rich domain [PF17982.3, score=32.8]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [RH, Score=691, Expect=0.0]; ENSG00000165671, NSD1, nuclear receptor binding SET domain protein 1, [RH, Score=667, Expect=0.0]; ENSG00000147548, NSD3, nuclear receptor binding SET domain protein 3, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [RH, Score=696, Expect=0.0]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [RH, Score=431, Expect=1e-130]} {Celegans: WBGene00016603, met-1, Histone-lysine N-methyltransferase, [Score=142, Expect=5e-34]} {Smed: dd_Smed_v6_4755_0_1, dd_Smed_v6_4755_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_8385} {RNA1310_4002, RNA1509_8385} {RNA1509_8385, RNA815_849} |
| 9. | MligTC455_41108 | 96 | 2.01 | Mlig455_002394 | Neo: - Age: - |
0.961 | - | - | - | - | - | 0.961 | Mlig455_002394 {REF} {Length: 3247} {RNA1509_50994} {RNA1310_9012.2} {RNA815_31617.1} | |
| 10. | MligTC455_16079 | 136 | 2.84 | Mlig455_042498 | Neo: - Age: logFC(26M/2M)=0.797 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_042498 {REF} {Length: 2366} {RNA1509_55486} {RNA1310_26714.2, RNA1509_55486} {RNA1509_55486, RNA815_22393} | |
| 11. | MligTC455_46007 | 1095 | 22.82 | Mlig455_015551 | Neo: - Age: - Regeneration-upregulated BL: 1.762 Regeneration-enriched BL: 1.762 |
RBMS3 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_015551 {REF} {Length: 2417} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=48.0]} {Human: ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [RH, Score=114, Expect=3e-27]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [RH, Score=112, Expect=1e-26]} {Mouse: ENSMUSG00000026970, Rbms1, RNA binding motif, single stranded interacting protein 1, [RH, Score=115, Expect=8e-28]; ENSMUSG00000039607, Rbms3, RNA binding motif, single stranded interacting protein, [RH, Score=113, Expect=5e-27]} {Dmel: FBgn0052423, shep, alan shepard, [Score=100, Expect=4e-22]} {Celegans: WBGene00006331, sup-26, SUPpressor, [RH, Score=118, Expect=9e-29]} {Smed: dd_Smed_v6_2612_0_1, dd_Smed_v6_2612_0_1, [RH, Score=109, Expect=2e-25]} {RNA1509_18229} {RNA1310_2231} {RNA815_12809} |
| 12. | MligTC455_49795 | 536 | 11.16 | Mlig455_044363, Mlig455_044374 | Neo: - Age: logFC(26M/2M)=-0.403 Regeneration-upregulated BL: 3.149 Regeneration-enriched BL: 3.149 |
PDZRN4 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_044363 {REF} {Length: 2406} {Pfam: PDZ domain [PF17820.3, score=62.5]; PDZ domain [PF00595.26, score=61.2]; PDZ domain [PF13180.8, score=33.2]} {Human: ENSG00000165966, PDZRN4, PDZ domain containing ring finger 4, [RH, Score=142, Expect=6e-35]} {Mouse: ENSMUSG00000036218, Pdzrn4, PDZ domain containing RING finger 4, [RH, Score=137, Expect=3e-33]} {Dmel: FBgn0024728, Slip1, [Score=78.6, Expect=7e-15]} {Celegans: WBGene00016846, C50F7.6, [RH, Score=80.9, Expect=5e-16]} {Smed: dd_Smed_v6_4699_0_1, dd_Smed_v6_4699_0_1, [RH, Score=125, Expect=2e-30]} {RNA1509_48738} {RNA1310_8814.1} {RNA815_40261} Mlig455_044374 {REF} {Length: 2315} {Pfam: PDZ domain [PF00595.26, score=47.6]; PDZ domain [PF17820.3, score=38.4]; PDZ domain [PF13180.8, score=22.2]} {Human: ENSG00000165966, PDZRN4, PDZ domain containing ring finger 4, [RH, Score=144, Expect=8e-36]} {Mouse: ENSMUSG00000036218, Pdzrn4, PDZ domain containing RING finger 4, [RH, Score=137, Expect=2e-33]} {Dmel: FBgn0024728, Slip1, [Score=78.6, Expect=8e-15]} {Celegans: WBGene00016846, C50F7.6, [RH, Score=80.1, Expect=8e-16]} {Smed: dd_Smed_v6_4699_0_1, dd_Smed_v6_4699_0_1, [RH, Score=124, Expect=3e-30]} {RNA1509_48738} {RNA1310_8814.1} {RNA815_40261} |
| 13. | MligTC455_17571 | 66 | 1.38 | Mlig455_055064, Mlig455_064061 | Neo: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_055064 {REF} {Length: 762} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_31425} {RNA1310_38834} {RNA815_18319} Mlig455_064061 {REF} {Length: 903} {TRANSSPLICED} {RNA1509_31425} {RNA1310_38834} {RNA815_18319} |
|
| 14. | MligTC455_39569 | 194 | 4.05 | Mlig455_006055, Mlig455_028715 | Neo: Int S/G2/M Age: - |
ZAN | 0.955 | - | - | - | - | - | 0.955 | Mlig455_006055 {REF} {Length: 1262} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=61.5]} {RNA1310_85984} Mlig455_028715 {REF} {Length: 4529} {Pfam: SH2 domain [PF00017.26, score=22.0]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=60.1, Expect=2e-08]} {RNA1509_15981} {RNA1310_15741} {RNA815_13643} |
| 15. | MligTC455_32684 | 420 | 8.75 | Mlig455_044350 | Neo: - Age: - Regeneration-upregulated BL: 2.960 Regeneration-enriched BL: 2.960 |
ADAM9 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_044350 {REF} {Length: 7296} {Pfam: Disintegrin [PF00200.25, score=49.8]; Reprolysin family propeptide [PF01562.21, score=41.8]; ADAM cysteine-rich [PF08516.14, score=21.5]; EGF-like domain [PF07974.15, score=19.9]} {Human: ENSG00000168615, ADAM9, ADAM metallopeptidase domain 9, [Score=143, Expect=2e-34]; ENSG00000197140, ADAM32, ADAM metallopeptidase domain 32, [Score=142, Expect=4e-34]; ENSG00000275594, ADAM32, ADAM metallopeptidase domain 32, [Score=141, Expect=1e-33]; ENSG00000073670, ADAM11, ADAM metallopeptidase domain 11, [Score=138, Expect=9e-33]; ENSG00000151651, ADAM8, ADAM metallopeptidase domain 8, [Score=136, Expect=2e-32]} {Mouse: ENSMUSG00000031555, Adam9, a disintegrin and metallopeptidase domain 9 (meltrin gamma), [Score=152, Expect=3e-37]} {Dmel: FBgn0259110, mmd, mind-meld, [Score=139, Expect=6e-33]} {Celegans: WBGene00006804, unc-71, ADM-1 preproprotein, [Score=155, Expect=2e-38]} {Smed: dd_Smed_v6_8718_0_1, dd_Smed_v6_8718_0_1, [Score=239, Expect=1e-64]} {RNA1509_16811} {RNA1310_5982, RNA1509_16811} {RNA1509_16811, RNA815_16761} |
| 16. | MligTC455_48257 | 51 | 1.07 | Mlig455_020980 | Neo: - Age: - |
VAV3 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_020980 {REF} {Length: 3664} {Pfam: Calponin homology (CH) domain [PF00307.33, score=41.6]; RhoGEF domain [PF00621.22, score=39.8]; SH2 domain [PF00017.26, score=27.7]; CAMSAP CH domain [PF11971.10, score=20.9]} {Human: ENSG00000134215, VAV3, vav guanine nucleotide exchange factor 3, [Score=135, Expect=5e-32]; ENSG00000160293, VAV2, vav guanine nucleotide exchange factor 2, [Score=134, Expect=1e-31]} {Mouse: ENSMUSG00000009621, Vav2, vav 2 oncogene, [Score=134, Expect=8e-32]; ENSMUSG00000033721, Vav3, vav 3 oncogene, [Score=132, Expect=3e-31]} {Celegans: WBGene00006887, vav-1, [Score=107, Expect=9e-24]} {Smed: dd_Smed_v6_6109_0_1, dd_Smed_v6_6109_0_1, [Score=97.1, Expect=1e-20]} {RNA1310_24185} {RNA815_29420} |
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