Data search


search
Exact
Search

Results for MligTC455_22274

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22274 2011 41.90 Mlig455_038507

Neo: -

Age: logFC(26M/2M)=0.411

Region-enriched R5: 1.184/0.00316

PKM Mlig455_038507 {REF} {Length: 2462} {TRANSSPLICED} {Pfam: Pyruvate kinase, barrel domain [PF00224.23, score=532.2]; Pyruvate kinase, alpha/beta domain [PF02887.18, score=107.6]; HpcH/HpaI aldolase/citrate lyase family [PF03328.16, score=22.4]} {Human: ENSG00000067225, PKM, pyruvate kinase M1/2, [RH, Score=702, Expect=0.0]; ENSG00000143627, PKLR, pyruvate kinase L/R, [RH, Score=670, Expect=0.0]; ENSG00000262785, PKLR, pyruvate kinase L/R, [RH, Score=670, Expect=0.0]} {Mouse: ENSMUSG00000032294, Pkm, pyruvate kinase, muscle, [RH, Score=700, Expect=0.0]} {Dmel: FBgn0267385, PyK, Pyruvate kinase, [RH, Score=661, Expect=0.0]} {Celegans: WBGene00009126, pyk-1, Pyruvate kinase, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_605_0_1, dd_Smed_v6_605_0_1, [RH, Score=770, Expect=0.0]} {RNA1509_13634, RNA1509_1681, RNA1509_32740} {RNA1310_7731.1, RNA1509_13634, RNA1509_1681, RNA1509_32740} {RNA1509_13634, RNA1509_1681, RNA1509_32740, RNA815_3516.1}

Cumulative graph for MligTC455_22274

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.689 5.579 0.08763 0.63973
RegionR2 0.07 5.579 0.87728 1.00000
RegionR3 0.668 5.579 0.05761 0.42320
RegionR4 0.614 5.579 0.14160 0.38510
RegionR5 1.184 5.579 0.00022 0.00316
RegionR6 0.587 5.579 0.11004 0.60539
RegionR7 -0.955 5.579 0.04752 0.41906
RegionR8 -0.479 5.579 0.37090 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.188 5.579 0.06113 0.72992
RegenerationR2 0.548 5.579 0.19202 0.63590
RegenerationR3 0.593 5.579 0.18159 0.61820
RegenerationR4 0.688 5.579 0.12563 0.53899
RegenerationR5 0.905 5.579 0.03048 0.29224
RegenerationR6 0.802 5.579 0.05765 0.30119
RegenerationBL 0.921 5.579 0.03657 0.21597
RegenerationTP 1.588 5.579 0.00127 0.05470


Genes with expression patterns similar to MligTC455_22274

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22274 2011 41.9 Mlig455_038507

Neo: -

Age: logFC(26M/2M)=0.411

Region-enriched R5: 1.184/0.00316

PKM 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_038507 {REF} {Length: 2462} {TRANSSPLICED} {Pfam: Pyruvate kinase, barrel domain [PF00224.23, score=532.2]; Pyruvate kinase, alpha/beta domain [PF02887.18, score=107.6]; HpcH/HpaI aldolase/citrate lyase family [PF03328.16, score=22.4]} {Human: ENSG00000067225, PKM, pyruvate kinase M1/2, [RH, Score=702, Expect=0.0]; ENSG00000143627, PKLR, pyruvate kinase L/R, [RH, Score=670, Expect=0.0]; ENSG00000262785, PKLR, pyruvate kinase L/R, [RH, Score=670, Expect=0.0]} {Mouse: ENSMUSG00000032294, Pkm, pyruvate kinase, muscle, [RH, Score=700, Expect=0.0]} {Dmel: FBgn0267385, PyK, Pyruvate kinase, [RH, Score=661, Expect=0.0]} {Celegans: WBGene00009126, pyk-1, Pyruvate kinase, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_605_0_1, dd_Smed_v6_605_0_1, [RH, Score=770, Expect=0.0]} {RNA1509_13634, RNA1509_1681, RNA1509_32740} {RNA1310_7731.1, RNA1509_13634, RNA1509_1681, RNA1509_32740} {RNA1509_13634, RNA1509_1681, RNA1509_32740, RNA815_3516.1}
2. MligTC455_22273 1312 27.33 Mlig455_037142

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.517

PKM 4.244 0.999 0.863 0.725 0.852 - 0.805 Mlig455_037142 {REF} {Length: 2476} {TRANSSPLICED} {Pfam: Pyruvate kinase, barrel domain [PF00224.23, score=532.2]; Pyruvate kinase, alpha/beta domain [PF02887.18, score=107.6]; HpcH/HpaI aldolase/citrate lyase family [PF03328.16, score=22.4]} {Human: ENSG00000067225, PKM, pyruvate kinase M1/2, [RH, Score=702, Expect=0.0]; ENSG00000143627, PKLR, pyruvate kinase L/R, [RH, Score=670, Expect=0.0]; ENSG00000262785, PKLR, pyruvate kinase L/R, [RH, Score=670, Expect=0.0]} {Mouse: ENSMUSG00000032294, Pkm, pyruvate kinase, muscle, [RH, Score=700, Expect=0.0]} {Dmel: FBgn0267385, PyK, Pyruvate kinase, [RH, Score=661, Expect=0.0]} {Celegans: WBGene00009126, pyk-1, Pyruvate kinase, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_605_0_1, dd_Smed_v6_605_0_1, [RH, Score=770, Expect=0.0]} {RNA1509_25980, RNA1509_32740} {RNA1310_7731.1, RNA1509_25980} {RNA1509_25980, RNA815_3516.1}
3. MligTC455_22275 731 15.23 Mlig455_052248

Neo: -

Age: Down-Down-Down

PKM 1.747 0.787 - - - - 0.960 Mlig455_052248 {REF} {Length: 2995} {TRANSSPLICED} {Pfam: Pyruvate kinase, barrel domain [PF00224.23, score=530.3]; Pyruvate kinase, alpha/beta domain [PF02887.18, score=107.7]; HpcH/HpaI aldolase/citrate lyase family [PF03328.16, score=22.2]} {Human: ENSG00000067225, PKM, pyruvate kinase M1/2, [RH, Score=700, Expect=0.0]; ENSG00000143627, PKLR, pyruvate kinase L/R, [RH, Score=669, Expect=0.0]; ENSG00000262785, PKLR, pyruvate kinase L/R, [RH, Score=669, Expect=0.0]} {Mouse: ENSMUSG00000032294, Pkm, pyruvate kinase, muscle, [RH, Score=698, Expect=0.0]} {Dmel: FBgn0267385, PyK, Pyruvate kinase, [RH, Score=659, Expect=0.0]} {Celegans: WBGene00009126, pyk-1, Pyruvate kinase, [RH, Score=639, Expect=0.0]} {Smed: dd_Smed_v6_605_0_1, dd_Smed_v6_605_0_1, [RH, Score=768, Expect=0.0]} {RNA1509_1681, RNA1509_51403} {RNA1310_7731.1, RNA1509_51403} {RNA1509_51403, RNA815_3516.1}
4. MligTC455_11974 5084 105.92 Mlig455_063004, Mlig455_063027

Neo: -

Age: logFC(26M/2M)=1.665

AP3M1 1.677 - - - 0.724 - 0.953

Mlig455_063004 {REF} {Length: 1967} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=215.1]; Clathrin adaptor complex small chain [PF01217.22, score=39.3]} {Human: ENSG00000185009, AP3M1, adaptor related protein complex 3 subunit mu 1, [RH, Score=543, Expect=0.0]; ENSG00000070718, AP3M2, adaptor related protein complex 3 subunit mu 2, [RH, Score=516, Expect=0.0]} {Mouse: ENSMUSG00000021824, Ap3m1, adaptor-related protein complex 3, mu 1 subunit, [RH, Score=540, Expect=0.0]; ENSMUSG00000031539, Ap3m2, adaptor-related protein complex 3, mu 2 subunit, [RH, Score=515, Expect=0.0]} {Dmel: FBgn0000330, cm, carmine, [RH, Score=509, Expect=3e-180]} {Celegans: WBGene00000164, apm-3, AdaPtin, Mu/medium chain (Clathrin associated complex), [RH, Score=460, Expect=3e-161]} {Smed: dd_Smed_v6_6368_0_1, dd_Smed_v6_6368_0_1, [RH, Score=474, Expect=1e-166]} {RNA1509_9522} {RNA1310_7893} {RNA815_2536.1}

Mlig455_063027 {REF} {Length: 1933} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=215.1]; Clathrin adaptor complex small chain [PF01217.22, score=39.3]} {Human: ENSG00000185009, AP3M1, adaptor related protein complex 3 subunit mu 1, [RH, Score=543, Expect=0.0]; ENSG00000070718, AP3M2, adaptor related protein complex 3 subunit mu 2, [RH, Score=516, Expect=0.0]} {Mouse: ENSMUSG00000021824, Ap3m1, adaptor-related protein complex 3, mu 1 subunit, [RH, Score=540, Expect=0.0]; ENSMUSG00000031539, Ap3m2, adaptor-related protein complex 3, mu 2 subunit, [RH, Score=515, Expect=0.0]} {Dmel: FBgn0000330, cm, carmine, [RH, Score=509, Expect=3e-180]} {Celegans: WBGene00000164, apm-3, AdaPtin, Mu/medium chain (Clathrin associated complex), [RH, Score=460, Expect=3e-161]} {Smed: dd_Smed_v6_6368_0_1, dd_Smed_v6_6368_0_1, [RH, Score=474, Expect=1e-166]} {RNA1509_9522} {RNA1310_7893} {RNA815_2536.1}
5. MligTC455_48446 2442 50.86 Mlig455_048051, Mlig455_048069

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.311

SF3B5 0.965 - - - 0.965 - -

Mlig455_048051 {REF} {Length: 472} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 10 (SF3b10) [PF07189.13, score=132.8]} {Human: ENSG00000169976, SF3B5, splicing factor 3b subunit 5, [RH, Score=141, Expect=2e-45]} {Mouse: ENSMUSG00000078348, Sf3b5, splicing factor 3b, subunit 5, [RH, Score=138, Expect=2e-44]} {Dmel: FBgn0040534, Sf3b5, Splicing factor 3b subunit 5, [RH, Score=152, Expect=7e-50]} {Smed: dd_Smed_v6_2023_0_1, dd_Smed_v6_2023_0_1, [RH, Score=137, Expect=3e-44]} {RNA1509_22949, RNA1509_32675, RNA1509_36002, RNA1509_38643, RNA1509_46341} {RNA1310_70901, RNA1509_22949, RNA1509_32675, RNA1509_36002, RNA1509_38643, RNA1509_46341} {RNA1509_22949, RNA1509_32675, RNA1509_36002, RNA1509_38643, RNA1509_46341, RNA815_11555.3}

Mlig455_048069 {REF} {Length: 476} {TRANSSPLICED} {Pfam: Splicing factor 3B subunit 10 (SF3b10) [PF07189.13, score=132.8]} {Human: ENSG00000169976, SF3B5, splicing factor 3b subunit 5, [RH, Score=141, Expect=2e-45]} {Mouse: ENSMUSG00000078348, Sf3b5, splicing factor 3b, subunit 5, [RH, Score=138, Expect=2e-44]} {Dmel: FBgn0040534, Sf3b5, Splicing factor 3b subunit 5, [RH, Score=152, Expect=7e-50]} {Smed: dd_Smed_v6_2023_0_1, dd_Smed_v6_2023_0_1, [RH, Score=137, Expect=3e-44]} {RNA1509_46341} {RNA1310_70901} {RNA815_11555.3}
6. MligTC455_29590 8591 178.98 Mlig455_034789

Neo: Int S/G2/M

Age: Down-Down-Up

RPL34 0.958 - - - 0.958 - - Mlig455_034789 {REF} {Length: 504} {TRANSSPLICED} {Pfam: Ribosomal protein L34e [PF01199.20, score=134.7]} {Human: ENSG00000109475, RPL34, ribosomal protein L34, [RH, Score=124, Expect=8e-38]} {Mouse: ENSMUSG00000062006, Rpl34, ribosomal protein L34, [RH, Score=125, Expect=4e-38]} {Dmel: FBgn0039406, RpL34a, Ribosomal protein L34a, [RH, Score=152, Expect=2e-48]} {Celegans: WBGene00004448, rpl-34, Ribosomal Protein, Large subunit, [RH, Score=118, Expect=7e-36]} {Smed: dd_Smed_v6_110_0_1, dd_Smed_v6_110_0_1, [RH, Score=151, Expect=4e-49]} {RNA1509_418, RNA1509_846} {RNA1310_70667, RNA1509_846} {RNA1509_846, RNA815_30525}
7. MligTC455_15848 2116 44.09 Mlig455_000212, Mlig455_058472

Neo: Neoblast, stringent

Age: -

Regeneration-enriched R6: 1.652
Regeneration-enriched BL: 1.394

PPM1B, PPM1G 0.953 - - - - 0.953 -

Mlig455_000212 {REF} {Length: 2692} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=220.8]} {Human: ENSG00000138032, PPM1B, protein phosphatase, Mg2+/Mn2+ dependent 1B, [Score=132, Expect=5e-33]; ENSG00000285542, AC013717.1, novel protein, PPM1B-SLC3A1 readthrough, [Score=130, Expect=8e-33]} {Mouse: ENSMUSG00000029147, Ppm1g, protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform, [Score=239, Expect=4e-73]} {Dmel: FBgn0033021, CG10417, [RH, Score=231, Expect=5e-68]} {Celegans: WBGene00018362, F42G9.1, Probable protein phosphatase 2C F42G9.1, [RH, Score=210, Expect=5e-62]} {Smed: dd_Smed_v6_2275_0_1, dd_Smed_v6_2275_0_1, [Score=179, Expect=3e-52]} {RNA1509_3498} {RNA1310_8167} {RNA815_213.1}

Mlig455_058472 {REF} {Length: 2757} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=245.0]} {Human: ENSG00000115241, PPM1G, protein phosphatase, Mg2+/Mn2+ dependent 1G, [RH, Score=231, Expect=2e-68]} {Mouse: ENSMUSG00000029147, Ppm1g, protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform, [RH, Score=234, Expect=5e-71]} {Dmel: FBgn0033021, CG10417, [RH, Score=233, Expect=2e-68]} {Celegans: WBGene00018362, F42G9.1, Probable protein phosphatase 2C F42G9.1, [RH, Score=211, Expect=5e-62]} {Smed: dd_Smed_v6_2275_0_1, dd_Smed_v6_2275_0_1, [Score=175, Expect=2e-50]} {RNA1509_3498} {RNA1310_8167, RNA1509_3498} {RNA1509_3498, RNA815_213.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA