Data search
Results for MligTC455_48533
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48533 | 231 | 4.81 | Mlig455_021648 | Neo: - Age: - |
CACUL1 | Mlig455_021648 {REF} {Length: 1793} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=41.9]} {Human: ENSG00000151893, CACUL1, CDK2 associated cullin domain 1, [RH, Score=97.1, Expect=7e-23]} {Mouse: ENSMUSG00000033417, Cacul1, CDK2 associated, cullin domain 1, [Score=97.4, Expect=9e-23]} {RNA1509_52558} {RNA1310_2696.1} {RNA815_6533.1} |
Cumulative graph for MligTC455_48533
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.419 | 3.008 | 0.13763 | 0.74266 | |
| RegionR2 | 1.256 | 3.008 | 0.09258 | 0.37322 | |
| RegionR3 | 0.364 | 3.008 | 0.50398 | 0.99592 | |
| RegionR4 | 0.558 | 3.008 | 0.40180 | 0.72828 | |
| RegionR5 | 0.114 | 3.008 | 0.81446 | 1.00000 | |
| RegionR6 | 0.185 | 3.008 | 0.74615 | 1.00000 | |
| RegionR7 | -0.469 | 3.008 | 0.53660 | 1.00000 | |
| RegionR8 | 0.411 | 3.008 | 0.62265 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.869 | 3.008 | 0.64700 | 1.00000 | |
| RegenerationR2 | -0.652 | 3.008 | 0.33935 | 0.77455 | |
| RegenerationR3 | -0.024 | 3.008 | 0.96221 | 1.00000 | |
| RegenerationR4 | -0.986 | 3.008 | 0.18236 | 0.62303 | |
| RegenerationR5 | -0.135 | 3.008 | 0.83637 | 0.99972 | |
| RegenerationR6 | -0.338 | 3.008 | 0.67163 | 0.90952 | |
| RegenerationBL | -0.811 | 3.008 | 0.50187 | 0.86603 | |
| RegenerationTP | 0.088 | 3.008 | 0.93181 | 1.00000 |
Genes with expression patterns similar to MligTC455_48533
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48533 | 231 | 4.81 | Mlig455_021648 | Neo: - Age: - |
CACUL1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_021648 {REF} {Length: 1793} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=41.9]} {Human: ENSG00000151893, CACUL1, CDK2 associated cullin domain 1, [RH, Score=97.1, Expect=7e-23]} {Mouse: ENSMUSG00000033417, Cacul1, CDK2 associated, cullin domain 1, [Score=97.4, Expect=9e-23]} {RNA1509_52558} {RNA1310_2696.1} {RNA815_6533.1} |
| 2. | MligTC455_17829 | 125 | 2.61 | Mlig455_048462 | Neo: - Age: Up-Up-Down |
KEAP1 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_048462 {REF} {Length: 3268} {Pfam: Kelch motif [PF01344.27, score=223.7]; Kelch motif [PF13964.8, score=132.4]; Kelch motif [PF07646.17, score=82.2]; Galactose oxidase, central domain [PF13418.8, score=81.0]; Galactose oxidase, central domain [PF13415.8, score=71.3]; Kelch motif [PF13854.8, score=41.4]} {Human: ENSG00000079999, KEAP1, kelch like ECH associated protein 1, [Score=270, Expect=5e-85]} {Mouse: ENSMUSG00000003308, Keap1, kelch-like ECH-associated protein 1, [Score=264, Expect=5e-83]} {Dmel: FBgn0038475, Keap1, [Score=269, Expect=9e-84]} {Celegans: WBGene00002185, kel-3, KELch-repeat containing protein, [Score=131, Expect=1e-33]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=342, Expect=2e-113]} {RNA1509_23206} {RNA1310_45235} {RNA815_31075} |
| 3. | MligTC455_21209 | 208 | 4.34 | Mlig455_024479 | Neo: - Age: Up-Down-Down |
0.961 | - | - | - | 0.961 | - | - | Mlig455_024479 {REF} {Length: 5655} {TRANSSPLICED} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=27.0]} {RNA1509_18836, RNA1509_26203, RNA1509_29402} {RNA1310_11496.1, RNA1509_26203, RNA1509_29402} {RNA1509_26203, RNA1509_29402, RNA815_20761} | |
| 4. | MligTC455_22622 | 253 | 5.27 | Mlig455_069069 | Neo: - Age: - Regeneration-upregulated R6: 2.381 Regeneration-enriched R6: 2.381 |
ATRX | 0.959 | - | - | - | - | - | 0.959 | Mlig455_069069 {REF} {Length: 7313} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=198.0]; Helicase conserved C-terminal domain [PF00271.33, score=51.8]} {Human: ENSG00000085224, ATRX, ATRX, chromatin remodeler, [Score=757, Expect=0.0]} {Mouse: ENSMUSG00000031229, Atrx, ATRX, chromatin remodeler, [RH, Score=759, Expect=0.0]} {Dmel: FBgn0039338, XNP, [RH, Score=709, Expect=0.0]} {Celegans: WBGene00006961, xnp-1, Transcriptional regulator ATRX homolog, [Score=626, Expect=0.0]} {Smed: dd_Smed_v6_5478_0_1, dd_Smed_v6_5478_0_1, [RH, Score=456, Expect=2e-139]} {RNA1509_2800} {RNA1310_990, RNA1509_2800} {RNA1509_2800, RNA815_839} |
| 5. | MligTC455_39966 | 945 | 19.68 | Mlig455_068099 | Neo: - Age: - |
DHX16 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_068099 {REF} {Length: 3162} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=77.8]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=64.4]; Helicase conserved C-terminal domain [PF00271.33, score=45.6]; DEAD/DEAH box helicase [PF00270.31, score=24.9]; AAA domain [PF13401.8, score=21.6]; AAA domain [PF13604.8, score=19.3]} {Human: ENSG00000233418, DHX16, DEAH-box helicase 16, [RH, Score=1186, Expect=0.0]; ENSG00000231377, DHX16, DEAH-box helicase 16, [RH, Score=1186, Expect=0.0]; ENSG00000233561, DHX16, DEAH-box helicase 16, [RH, Score=1186, Expect=0.0]; ENSG00000233049, DHX16, DEAH-box helicase 16, [RH, Score=1186, Expect=0.0]; ENSG00000204560, DHX16, DEAH-box helicase 16, [RH, Score=1186, Expect=0.0]; ENSG00000226171, DHX16, DEAH-box helicase 16, [RH, Score=1186, Expect=0.0]; ENSG00000206486, DHX16, DEAH-box helicase 16, [RH, Score=1182, Expect=0.0]} {Mouse: ENSMUSG00000024422, Dhx16, DEAH (Asp-Glu-Ala-His) box polypeptide 16, [RH, Score=1187, Expect=0.0]} {Dmel: FBgn0086444, l(2)37Cb, lethal (2) 37Cb, [RH, Score=1224, Expect=0.0]} {Celegans: WBGene00003392, mog-4, Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4, [RH, Score=1162, Expect=0.0]} {Smed: dd_Smed_v6_10434_0_1, dd_Smed_v6_10434_0_1, [RH, Score=882, Expect=0.0]} {RNA1509_45569, RNA1509_6379} {RNA1310_4272, RNA1509_45569} {RNA1509_45569, RNA815_1313} |
| 6. | MligTC455_27961 | 161 | 3.36 | Mlig455_033788 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 2.381/0.02589 |
MYO18A | 0.953 | - | - | - | - | - | 0.953 | Mlig455_033788 {REF} {Length: 7335} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=304.4]; PDZ domain [PF17820.3, score=26.5]; PDZ domain [PF00595.26, score=25.5]; Myosin tail [PF01576.21, score=21.1]} {Human: ENSG00000196535, MYO18A, myosin XVIIIA, [RH, Score=872, Expect=0.0]} {Mouse: ENSMUSG00000000631, Myo18a, myosin XVIIIA, [RH, Score=866, Expect=0.0]} {Dmel: FBgn0026059, Mhcl, Myosin heavy chain-like, [RH, Score=877, Expect=0.0]} {Celegans: WBGene00003776, nmy-1, Non-muscle MYosin, [Score=362, Expect=3e-101]} {Smed: dd_Smed_v6_6277_0_1, dd_Smed_v6_6277_0_1, [RH, Score=798, Expect=0.0]} {RNA1509_9265} {RNA1310_390, RNA1509_9265} {RNA1509_9265, RNA815_386} |
| 7. | MligTC455_37766 | 513 | 10.69 | Mlig455_029955 | Neo: - Age: - Region-enriched R2: 3.095/0.00006 |
IVNS1ABP | 0.953 | - | - | - | - | - | 0.953 | Mlig455_029955 {REF} {Length: 3595} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=108.7]; BTB/POZ domain [PF00651.33, score=57.5]; Kelch motif [PF13964.8, score=40.3]; Galactose oxidase, central domain [PF13418.8, score=29.5]; Kelch motif [PF13854.8, score=19.4]} {Human: ENSG00000116679, IVNS1ABP, influenza virus NS1A binding protein, [Score=124, Expect=8e-29]} {Mouse: ENSMUSG00000023150, Ivns1abp, influenza virus NS1A binding protein, [Score=119, Expect=2e-27]} {Dmel: FBgn0040230, dbo, diablo, [Score=92.4, Expect=4e-19]} {Celegans: WBGene00006493, tag-147, [Score=125, Expect=2e-29]} {Smed: dd_Smed_v6_5109_0_1, dd_Smed_v6_5109_0_1, [Score=137, Expect=3e-33]} {RNA1509_41046, RNA1509_6617} {RNA1310_3820, RNA1509_41046, RNA1509_6617} {RNA1509_41046, RNA1509_6617, RNA815_4140} |
| 8. | MligTC455_21208 | 406 | 8.45 | Mlig455_024309, Mlig455_024366 | Neo: - Age: Up-Down-Down |
0.95 | - | - | - | 0.950 | - | - | Mlig455_024309 {REF} {Length: 4285} {TRANSSPLICED} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=27.0]} {RNA1509_18836} {RNA1310_11496.1, RNA1509_18836} {RNA1509_18836, RNA815_20761} Mlig455_024366 {REF} {Length: 3750} {TRANSSPLICED} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=26.3]} {RNA1509_18836} {RNA1310_14991} {RNA815_20761} |
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