Data search
Results for MligTC455_48822
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48822 | 452 | 9.42 | Mlig455_008826, Mlig455_008931 | Neo: Irradiation Age: - Region-enriched R5: 1.925/0.04975 Regeneration-enriched R6: 4.526 |
TNK2 | Mlig455_008826 {REF} {Length: 2869} {Pfam: UBA-like domain [PF14555.8, score=27.3]} {Human: ENSG00000061938, TNK2, tyrosine kinase non receptor 2, [RH, Score=69.7, Expect=1e-12]} {Mouse: ENSMUSG00000022791, Tnk2, tyrosine kinase, non-receptor, 2, [RH, Score=70.1, Expect=8e-13]} {RNA1310_31670} {RNA815_33665} Mlig455_008931 {REF} {Length: 3044} {Pfam: UBA-like domain [PF14555.8, score=28.7]} {Human: ENSG00000061938, TNK2, tyrosine kinase non receptor 2, [RH, Score=70.9, Expect=6e-13]} {Mouse: ENSMUSG00000022791, Tnk2, tyrosine kinase, non-receptor, 2, [RH, Score=70.9, Expect=4e-13]} {RNA1310_31670} {RNA815_33665} |
Cumulative graph for MligTC455_48822
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.279 | 3.41 | 0.54957 | 1.00000 | |
| RegionR2 | 0.624 | 3.41 | 0.56973 | 0.93029 | |
| RegionR3 | -3.391 | 3.41 | 0.00507 | 0.09592 | |
| RegionR4 | -0.971 | 3.41 | 0.42830 | 0.75663 | |
| RegionR5 | 1.925 | 3.41 | 0.00815 | 0.04975 | |
| RegionR6 | -0.157 | 3.41 | 0.88905 | 1.00000 | |
| RegionR7 | 0.225 | 3.41 | 0.81087 | 1.00000 | |
| RegionR8 | 0.466 | 3.41 | 0.66868 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.968 | 3.41 | 0.53638 | 1.00000 | |
| RegenerationR2 | 1.727 | 3.41 | 0.07210 | 0.43615 | |
| RegenerationR3 | 5.013 | 3.41 | 0.00025 | 0.02055 | |
| RegenerationR4 | 1.478 | 3.41 | 0.22890 | 0.67801 | |
| RegenerationR5 | 1.958 | 3.41 | 0.04735 | 0.35249 | |
| RegenerationR6 | 4.526 | 3.41 | 0.00004 | 0.00540 | |
| RegenerationBL | 3.73 | 3.41 | 0.00006 | 0.00318 | |
| RegenerationTP | 3.221 | 3.41 | 0.00486 | 0.11638 |
Genes with expression patterns similar to MligTC455_48822
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48822 | 452 | 9.42 | Mlig455_008826, Mlig455_008931 | Neo: Irradiation Age: - Region-enriched R5: 1.925/0.04975 Regeneration-enriched R6: 4.526 |
TNK2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_008826 {REF} {Length: 2869} {Pfam: UBA-like domain [PF14555.8, score=27.3]} {Human: ENSG00000061938, TNK2, tyrosine kinase non receptor 2, [RH, Score=69.7, Expect=1e-12]} {Mouse: ENSMUSG00000022791, Tnk2, tyrosine kinase, non-receptor, 2, [RH, Score=70.1, Expect=8e-13]} {RNA1310_31670} {RNA815_33665} Mlig455_008931 {REF} {Length: 3044} {Pfam: UBA-like domain [PF14555.8, score=28.7]} {Human: ENSG00000061938, TNK2, tyrosine kinase non receptor 2, [RH, Score=70.9, Expect=6e-13]} {Mouse: ENSMUSG00000022791, Tnk2, tyrosine kinase, non-receptor, 2, [RH, Score=70.9, Expect=4e-13]} {RNA1310_31670} {RNA815_33665} |
| 2. | MligTC455_42999 | 650 | 13.55 | Mlig455_050082 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.377 Regeneration-upregulated BL: 3.339 Regeneration-enriched BL: 3.339 |
2.527 | - | - | - | 0.963 | 0.722 | 0.842 | Mlig455_050082 {REF} {Length: 2748} {Pfam: Seryl-tRNA synthetase N-terminal domain [PF02403.24, score=26.3]; Snapin/Pallidin [PF14712.8, score=23.3]; Fez1 [PF06818.17, score=21.6]; Crescentin protein [PF19220.2, score=17.7]} {RNA1509_12731} {RNA1310_34600} {RNA815_16012} | |
| 3. | MligTC455_38102 | 357 | 7.44 | Mlig455_044855 | Neo: - Age: - |
PABPC4 | 1.852 | - | - | - | 0.952 | - | 0.900 | Mlig455_044855 {REF} {Length: 2615} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=72.4]} {Human: ENSG00000090621, PABPC4, poly(A) binding protein cytoplasmic 4, [Score=72.8, Expect=4e-14]; ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [Score=70.5, Expect=2e-13]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [Score=70.1, Expect=2e-13]} {Mouse: ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [Score=94.0, Expect=1e-22]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [Score=94.0, Expect=1e-21]} {Celegans: WBGene00001368, exc-7, [Score=81.6, Expect=1e-17]} {Smed: dd_Smed_v6_10994_0_1, dd_Smed_v6_10994_0_1, [Score=52.8, Expect=4e-08]} {RNA1509_12117} {RNA1310_20351.1} {RNA815_17342} |
| 4. | MligTC455_40262 | 46 | 0.95 | Mlig455_010972 | Neo: - Age: - |
TJP1 | 0.969 | - | - | - | - | 0.969 | - | Mlig455_010972 {REF} {Length: 3607} {Pfam: PDZ domain [PF00595.26, score=58.3]; PDZ domain [PF17820.3, score=35.4]; PDZ domain [PF13180.8, score=24.9]; ZU5 domain [PF00791.22, score=20.8]} {Human: ENSG00000104067, TJP1, tight junction protein 1, [Score=71.2, Expect=5e-12]; ENSG00000277401, TJP1, tight junction protein 1, [Score=71.2, Expect=5e-12]} {Mouse: ENSMUSG00000030516, Tjp1, tight junction protein 1, [Score=72.4, Expect=1e-12]} {Dmel: FBgn0032363, Dlg5, Discs large 5, [Score=78.2, Expect=2e-14]} {Celegans: WBGene00013683, zoo-1, ZO-1 (Zonula Occludens tight junctional protein) Ortholog, [Score=74.3, Expect=2e-13]} {RNA1310_34445} |
| 5. | MligTC455_12739 | 35 | 0.73 | Mlig455_025061, Mlig455_025077, Mlig455_066028, Mlig455_067619 | Neo: - Age: - |
RAB10 | 0.968 | - | - | - | - | 0.968 | - | Mlig455_025061 {REF} {Length: 877} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=215.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=121.6]; ADP-ribosylation factor family [PF00025.23, score=60.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=26.4]; RsgA GTPase [PF03193.18, score=24.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.1]; 50S ribosome-binding GTPase [PF01926.25, score=20.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.9]; Ferrous iron transport protein B [PF02421.20, score=18.1]} {Human: ENSG00000084733, RAB10, RAB10, member RAS oncogene family, [RH, Score=276, Expect=4e-94]} {Mouse: ENSMUSG00000020671, Rab10, RAB10, member RAS oncogene family, [RH, Score=276, Expect=3e-94]} {Dmel: FBgn0015789, Rab10, [RH, Score=268, Expect=3e-91]} {Celegans: WBGene00004273, rab-10, Ras-related protein Rab-10, [RH, Score=261, Expect=6e-89]} {Smed: dd_Smed_v6_1573_0_1, dd_Smed_v6_1573_0_1, [Score=237, Expect=2e-79]} {RNA1509_7600} {RNA1310_31770} {RNA815_8855} Mlig455_025077 {REF} {Length: 877} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=215.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=121.6]; ADP-ribosylation factor family [PF00025.23, score=60.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=26.4]; RsgA GTPase [PF03193.18, score=24.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.1]; 50S ribosome-binding GTPase [PF01926.25, score=20.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.9]; Ferrous iron transport protein B [PF02421.20, score=18.1]} {Human: ENSG00000084733, RAB10, RAB10, member RAS oncogene family, [RH, Score=276, Expect=4e-94]} {Mouse: ENSMUSG00000020671, Rab10, RAB10, member RAS oncogene family, [RH, Score=276, Expect=3e-94]} {Dmel: FBgn0015789, Rab10, [RH, Score=268, Expect=3e-91]} {Celegans: WBGene00004273, rab-10, Ras-related protein Rab-10, [RH, Score=261, Expect=6e-89]} {Smed: dd_Smed_v6_1573_0_1, dd_Smed_v6_1573_0_1, [Score=237, Expect=2e-79]} {RNA1509_7600} {RNA1310_31770} {RNA815_8855} Mlig455_066028 {REF} {Length: 745} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=215.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=121.6]; ADP-ribosylation factor family [PF00025.23, score=60.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=26.5]; RsgA GTPase [PF03193.18, score=24.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.1]; 50S ribosome-binding GTPase [PF01926.25, score=20.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.9]; Ferrous iron transport protein B [PF02421.20, score=18.2]} {Human: ENSG00000084733, RAB10, RAB10, member RAS oncogene family, [RH, Score=277, Expect=1e-94]} {Mouse: ENSMUSG00000020671, Rab10, RAB10, member RAS oncogene family, [RH, Score=277, Expect=9e-95]} {Dmel: FBgn0015789, Rab10, [RH, Score=269, Expect=1e-91]} {Celegans: WBGene00004273, rab-10, Ras-related protein Rab-10, [RH, Score=263, Expect=2e-89]} {Smed: dd_Smed_v6_1573_0_1, dd_Smed_v6_1573_0_1, [Score=237, Expect=2e-79]} {RNA1509_20610} {RNA1310_31770} {RNA815_8855} Mlig455_067619 {REF} {Length: 876} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=215.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=121.6]; ADP-ribosylation factor family [PF00025.23, score=60.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=26.4]; RsgA GTPase [PF03193.18, score=24.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.1]; 50S ribosome-binding GTPase [PF01926.25, score=20.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.9]; Ferrous iron transport protein B [PF02421.20, score=18.1]} {Human: ENSG00000084733, RAB10, RAB10, member RAS oncogene family, [RH, Score=276, Expect=4e-94]} {Mouse: ENSMUSG00000020671, Rab10, RAB10, member RAS oncogene family, [RH, Score=276, Expect=3e-94]} {Dmel: FBgn0015789, Rab10, [RH, Score=268, Expect=3e-91]} {Celegans: WBGene00004273, rab-10, Ras-related protein Rab-10, [RH, Score=261, Expect=6e-89]} {Smed: dd_Smed_v6_1573_0_1, dd_Smed_v6_1573_0_1, [Score=237, Expect=2e-79]} {RNA1509_20610} {RNA1310_31770} {RNA815_8855} |
| 6. | MligTC455_19940 | 60 | 1.24 | Mlig455_007473 | Neo: - Age: - |
0.965 | - | - | 0.965 | - | - | - | Mlig455_007473 {REF} {Length: 1690} {RNA1509_46065} {RNA1310_12241} {RNA815_4375} | |
| 7. | MligTC455_25951 | 79 | 1.65 | Mlig455_042141, Mlig455_065836 | Neo: - Age: Up-Up-Down |
MX1, MX2 | 0.964 | - | - | - | - | 0.964 | - | Mlig455_042141 {REF} {Length: 4397} {Pfam: Dynamin family [PF00350.25, score=55.5]; Dynamin central region [PF01031.22, score=52.7]; Dynamin GTPase effector domain [PF02212.20, score=31.6]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=111, Expect=1e-25]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=107, Expect=2e-24]; ENSMUSG00000000386, Mx1, MX dynamin-like GTPase 1, [Score=107, Expect=1e-25]} {Dmel: FBgn0003392, shi, shibire, [Score=62.8, Expect=5e-10]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=60.8, Expect=1e-09]} {Smed: dd_Smed_v6_884_0_6, dd_Smed_v6_884_0_6, [RH, Score=69.7, Expect=1e-14]} {RNA1509_26477} {RNA1310_39755} {RNA815_29724} Mlig455_065836 {REF} {Length: 2599} {Pfam: Dynamin family [PF00350.25, score=136.2]; Dynamin central region [PF01031.22, score=135.0]; Dynamin GTPase effector domain [PF02212.20, score=31.6]; 50S ribosome-binding GTPase [PF01926.25, score=28.4]; Ferrous iron transport protein B [PF02421.20, score=22.1]} {Human: ENSG00000157601, MX1, MX dynamin like GTPase 1, [Score=295, Expect=2e-89]; ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=295, Expect=4e-89]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=293, Expect=2e-89]} {Dmel: FBgn0003392, shi, shibire, [Score=162, Expect=2e-41]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=167, Expect=5e-43]} {Smed: dd_Smed_v6_6863_0_3, dd_Smed_v6_6863_0_3, [Score=165, Expect=1e-42]} {RNA1509_26477} {RNA1310_5329.2} {RNA815_1588.1} |
| 8. | MligTC455_40587 | 52 | 1.09 | Mlig455_002665 | Neo: - Age: - |
0.96 | - | - | - | 0.960 | - | - | Mlig455_002665 {REF} {Length: 2505} {TRANSSPLICED} {Smed: dd_Smed_v6_14679_0_1, dd_Smed_v6_14679_0_1, [Score=85.9, Expect=9e-18]} | |
| 9. | MligTC455_15068 | 150 | 3.12 | Mlig455_060686 | Neo: Irradiation Age: - Region-enriched R5: 2.339/0.00152 Regeneration-upregulated BL: 4.321 Regeneration-enriched BL: 4.321 |
0.959 | - | - | - | - | - | 0.959 | Mlig455_060686 {REF} {Length: 3820} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=29.0]; C2H2-type zinc finger [PF13894.8, score=23.8]} {Mouse: ENSMUSG00000036898, Zfp157, zinc finger protein 157, [Score=53.5, Expect=3e-07]} {RNA1509_40259} {RNA1310_23296, RNA1509_40259} {RNA1509_40259, RNA815_10259} | |
| 10. | MligTC455_15737 | 168 | 3.51 | Mlig455_069550 | Neo: - Age: logFC(26M/2M)=0.762 |
SGMS1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_069550 {REF} {Length: 2417} {Pfam: PAP2 superfamily C-terminal [PF14360.8, score=83.5]} {Human: ENSG00000198964, SGMS1, sphingomyelin synthase 1, [RH, Score=210, Expect=1e-62]} {Mouse: ENSMUSG00000040451, Sgms1, sphingomyelin synthase 1, [RH, Score=207, Expect=1e-61]; ENSMUSG00000050931, Sgms2, sphingomyelin synthase 2, [RH, Score=201, Expect=5e-60]; ENSMUSG00000116143, Sgms2, sphingomyelin synthase 2, [RH, Score=201, Expect=5e-60]} {Dmel: FBgn0052380, SMSr, [RH, Score=171, Expect=1e-46]} {Celegans: WBGene00004892, sms-1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, [RH, Score=201, Expect=7e-59]} {Smed: dd_Smed_v6_11976_0_2, dd_Smed_v6_11976_0_2, [RH, Score=167, Expect=5e-47]} {RNA1509_21942} {RNA1310_9001} {RNA815_13690} |
| 11. | MligTC455_28364 | 467 | 9.73 | Mlig455_061240, Mlig455_061241 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.355 Regeneration-upregulated R6: 2.218 Regeneration-enriched R6: 2.218 |
RTL1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_061240 {REF} {Length: 5353} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=103.3]; 'Cold-shock' DNA-binding domain [PF00313.24, score=30.2]; Aspartyl protease [PF13650.8, score=21.9]; Zinc knuckle [PF13696.8, score=21.9]; Zinc knuckle [PF00098.25, score=21.6]; gag-polyprotein putative aspartyl protease [PF13975.8, score=21.3]; Aspartyl protease [PF09668.12, score=20.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=57.4, Expect=2e-07]} {Mouse: ENSMUSG00000033508, Asprv1, aspartic peptidase, retroviral-like 1, [Score=50.8, Expect=5e-06]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=203, Expect=8e-56]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1} Mlig455_061241 {REF} {Length: 5317} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=98.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.7]; Integrase core domain [PF00665.28, score=47.7]; Integrase zinc binding domain [PF17921.3, score=38.4]; H2C2 zinc finger [PF09337.12, score=19.5]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=147, Expect=7e-38]} {RNA1509_4878, RNA1509_55705} {RNA1310_542.1, RNA1509_55705} {RNA1509_55705, RNA815_7586} |
| 12. | MligTC455_48335 | 529 | 11.02 | Mlig455_059727 | Neo: Int S/G2/M Age: - |
STT3A | 0.952 | - | - | - | - | 0.952 | - | Mlig455_059727 {REF} {Length: 3414} {TRANSSPLICED} {Pfam: Oligosaccharyl transferase STT3 subunit [PF02516.16, score=490.4]; Dolichyl-phosphate-mannose-protein mannosyltransferase [PF13231.8, score=24.3]} {Human: ENSG00000134910, STT3A, STT3A, catalytic subunit of the oligosaccharyltransferase complex, [RH, Score=1080, Expect=0.0]} {Mouse: ENSMUSG00000032116, Stt3a, STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae), [RH, Score=1077, Expect=0.0]} {Dmel: FBgn0031149, Stt3A, Catalytic subunit 3A of the oligosaccharyltransferase complex, [RH, Score=1066, Expect=0.0]} {Celegans: WBGene00020437, stt-3, Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3, [Score=841, Expect=0.0]} {Smed: dd_Smed_v6_1174_0_1, dd_Smed_v6_1174_0_1, [RH, Score=1102, Expect=0.0]} {RNA1509_7265} {RNA1310_3970, RNA1509_7265} {RNA1509_7265, RNA815_3344} |