Data search
Results for MligTC455_49201
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_49201 | 7138 | 148.70 | Mlig455_010810 | Neo: - Age: Down-Up-Down |
RHOA | Mlig455_010810 {REF} {Length: 2111} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=195.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=81.4]; ADP-ribosylation factor family [PF00025.23, score=41.1]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.3]} {Human: ENSG00000067560, RHOA, ras homolog family member A, [RH, Score=353, Expect=1e-125]; ENSG00000155366, RHOC, ras homolog family member C, [RH, Score=345, Expect=1e-122]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [RH, Score=353, Expect=6e-126]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [RH, Score=345, Expect=8e-123]} {Dmel: FBgn0014020, Rho1, [RH, Score=343, Expect=6e-122]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [RH, Score=335, Expect=4e-119]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [RH, Score=338, Expect=2e-120]} {RNA1509_941} {RNA1310_31233.1, RNA1509_941} {RNA1509_941, RNA815_4165.1} |
Cumulative graph for MligTC455_49201
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.285 | 7.312 | 0.00083 | 0.09591 | |
| RegionR2 | -0.454 | 7.312 | 0.00488 | 0.06317 | |
| RegionR3 | 0.419 | 7.312 | 0.00106 | 0.03102 | |
| RegionR4 | 0.848 | 7.312 | 0.00000 | 0.00000 | |
| RegionR5 | 0.501 | 7.312 | 0.00005 | 0.00093 | |
| RegionR6 | 0.406 | 7.312 | 0.00207 | 0.06206 | |
| RegionR7 | 0.003 | 7.312 | 0.98458 | 1.00000 | |
| RegionR8 | -0.439 | 7.312 | 0.03196 | 0.35012 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.071 | 7.312 | 0.90313 | 1.00000 | |
| RegenerationR2 | -0.042 | 7.312 | 0.76917 | 0.98002 | |
| RegenerationR3 | -0.334 | 7.312 | 0.02394 | 0.27928 | |
| RegenerationR4 | -0.081 | 7.312 | 0.59426 | 0.91072 | |
| RegenerationR5 | -0.072 | 7.312 | 0.61225 | 0.91493 | |
| RegenerationR6 | -0.141 | 7.312 | 0.35304 | 0.69828 | |
| RegenerationBL | 0.263 | 7.312 | 0.10486 | 0.38233 | |
| RegenerationTP | 0.25 | 7.312 | 0.17195 | 0.60434 |
Genes with expression patterns similar to MligTC455_49201
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_49201 | 7138 | 148.7 | Mlig455_010810 | Neo: - Age: Down-Up-Down |
RHOA | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_010810 {REF} {Length: 2111} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=195.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=81.4]; ADP-ribosylation factor family [PF00025.23, score=41.1]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.3]} {Human: ENSG00000067560, RHOA, ras homolog family member A, [RH, Score=353, Expect=1e-125]; ENSG00000155366, RHOC, ras homolog family member C, [RH, Score=345, Expect=1e-122]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [RH, Score=353, Expect=6e-126]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [RH, Score=345, Expect=8e-123]} {Dmel: FBgn0014020, Rho1, [RH, Score=343, Expect=6e-122]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [RH, Score=335, Expect=4e-119]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [RH, Score=338, Expect=2e-120]} {RNA1509_941} {RNA1310_31233.1, RNA1509_941} {RNA1509_941, RNA815_4165.1} |
| 2. | MligTC455_49202 | 7284 | 151.75 | Mlig455_033231 | Neo: - Age: - |
RHOA | 5.55 | 0.988 | 0.876 | 0.928 | 0.888 | 0.896 | 0.974 | Mlig455_033231 {REF} {Length: 2133} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=195.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=81.4]; ADP-ribosylation factor family [PF00025.23, score=41.1]; Elongation factor Tu GTP binding domain [PF00009.29, score=24.3]} {Human: ENSG00000067560, RHOA, ras homolog family member A, [RH, Score=353, Expect=1e-125]; ENSG00000155366, RHOC, ras homolog family member C, [RH, Score=345, Expect=1e-122]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [RH, Score=353, Expect=6e-126]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [RH, Score=345, Expect=8e-123]} {Dmel: FBgn0014020, Rho1, [RH, Score=343, Expect=6e-122]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [RH, Score=335, Expect=4e-119]} {Smed: dd_Smed_v6_813_0_1, dd_Smed_v6_813_0_1, [RH, Score=338, Expect=2e-120]} {RNA1509_25717, RNA1509_31126, RNA1509_9021} {RNA1310_31233.1, RNA1509_25717, RNA1509_31126, RNA1509_9021} {RNA1509_25717, RNA1509_31126, RNA1509_9021, RNA815_4165.1} |
| 3. | MligTC455_41434 | 736 | 15.32 | Mlig455_034800 | Neo: Irradiation Age: - |
1.749 | - | - | - | 0.962 | 0.787 | - | Mlig455_034800 {REF} {Length: 2333} {TRANSSPLICED} {RNA1509_11589, RNA1509_43191, RNA1509_54049} {RNA1310_26849.1, RNA1509_11589, RNA1509_43191, RNA1509_54049} {RNA1509_11589, RNA1509_43191, RNA1509_54049, RNA815_11952} | |
| 4. | MligTC455_44504 | 282 | 5.88 | Mlig455_048122 | Neo: Irradiation Age: - Region-specific R4: 5.645 Region-enriched R4: 4.095/0.00000 |
0.962 | - | - | - | - | 0.962 | - | Mlig455_048122 {REF} {Length: 770} {RNA1509_23014, RNA1509_31538} {RNA1310_48549, RNA1509_23014, RNA1509_31538} {RNA1509_23014, RNA1509_31538, RNA815_33778} | |
| 5. | MligTC455_15735 | 214 | 4.45 | Mlig455_053725 | Neo: - Age: Up-Down-Up |
NAA30 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_053725 {REF} {Length: 719} {TRANSSPLICED} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=67.0]; Acetyltransferase (GNAT) domain [PF13508.9, score=43.9]; Acetyltransferase (GNAT) domain [PF13673.9, score=36.8]; FR47-like protein [PF08445.12, score=33.5]; Acetyltransferase (GNAT) domain [PF13523.8, score=26.3]} {Human: ENSG00000139977, NAA30, N(alpha)-acetyltransferase 30, NatC catalytic subunit, [RH, Score=195, Expect=1e-61]} {Mouse: ENSMUSG00000036282, Naa30, N(alpha)-acetyltransferase 30, NatC catalytic subunit, [RH, Score=198, Expect=4e-63]} {Dmel: FBgn0024362, Naa30A, N(alpha)-acetyltransferase 30 A, [RH, Score=166, Expect=1e-50]} {Celegans: WBGene00015074, natc-2, N-alpha-AcetylTransferase C complex subunit, [RH, Score=173, Expect=2e-54]} {Smed: dd_Smed_v6_8724_0_1, dd_Smed_v6_8724_0_1, [RH, Score=201, Expect=1e-65]} {RNA1509_23974} {RNA1310_47162} {RNA815_24882} |
| 6. | MligTC455_47509 | 816 | 17 | Mlig455_070906 | Neo: - Age: - |
GALK2 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_070906 {REF} {Length: 3183} {TRANSSPLICED} {Pfam: Galactokinase galactose-binding signature [PF10509.11, score=81.8]; GHMP kinases C terminal [PF08544.15, score=56.5]; GHMP kinases N terminal domain [PF00288.28, score=49.1]} {Human: ENSG00000156958, GALK2, galactokinase 2, [RH, Score=310, Expect=3e-100]} {Mouse: ENSMUSG00000027207, Galk2, galactokinase 2, [RH, Score=320, Expect=2e-104]} {Dmel: FBgn0263199, Galk, Galactokinase, [RH, Score=255, Expect=5e-79]} {Celegans: WBGene00006461, tag-96, [RH, Score=207, Expect=1e-61]} {Smed: dd_Smed_v6_3084_0_1, dd_Smed_v6_3084_0_1, [RH, Score=308, Expect=8e-100]} {RNA1509_24036, RNA1509_32107, RNA1509_38803, RNA1509_39186, RNA1509_53249, RNA1509_56440} {RNA1310_10159.2, RNA1509_24036, RNA1509_32107, RNA1509_38803, RNA1509_39186, RNA1509_53249, RNA1509_56440} {RNA1509_24036, RNA1509_32107, RNA1509_38803, RNA1509_39186, RNA1509_53249, RNA1509_56440, RNA815_7636} |
| 7. | MligTC455_53592 | 69 | 1.43 | Mlig455_002033 | Neo: - Age: Down-Up-Up |
0.953 | - | - | - | - | 0.953 | - | Mlig455_002033 {REF} {Length: 1968} {Pfam: Tetraspanin family [PF00335.22, score=27.4]} {RNA1509_42415} {RNA1310_22096} {RNA815_22407} |
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