Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_49257 | 739 | 15.40 | Mlig455_033298 | Neo: - Age: - |
MFHAS1 | Mlig455_033298 {REF} {Length: 1564} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=64.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=44.5]; Leucine-rich repeat [PF14580.8, score=29.1]} {Human: ENSG00000147324, MFHAS1, malignant fibrous histiocytoma amplified sequence 1, [Score=102, Expect=4e-23]; ENSG00000285022, AC270282.1, malignant fibrous histiocytoma amplified sequence 1, [Score=102, Expect=4e-23]} {Mouse: ENSMUSG00000070056, Mfhas1, malignant fibrous histiocytoma amplified sequence 1, [Score=94.7, Expect=1e-20]} {Dmel: FBgn0263289, scrib, scribbled, [Score=87.8, Expect=2e-18]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=85.1, Expect=8e-18]} {Smed: dd_Smed_v6_11443_0_1, dd_Smed_v6_11443_0_1, [RH, Score=102, Expect=7e-25]} {RNA1509_32286, RNA1509_43570} {RNA1310_22536.1, RNA1509_32286, RNA1509_43570} {RNA1509_32286, RNA1509_43570, RNA815_11933} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -2.357 | 4.186 | 0.05230 | 0.53665 | |
RegionR2 | 0.999 | 4.186 | 0.01610 | 0.13454 | |
RegionR3 | 0.688 | 4.186 | 0.05336 | 0.40504 | |
RegionR4 | 0.168 | 4.186 | 0.66127 | 0.96071 | |
RegionR5 | 0.45 | 4.186 | 0.18187 | 0.45963 | |
RegionR6 | 0.338 | 4.186 | 0.38624 | 0.96321 | |
RegionR7 | 0.195 | 4.186 | 0.69759 | 1.00000 | |
RegionR8 | -0.479 | 4.186 | 0.48512 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 0.162 | 4.186 | 0.93556 | 1.00000 | |
RegenerationR2 | 0.441 | 4.186 | 0.10634 | 0.51242 | |
RegenerationR3 | -0.05 | 4.186 | 0.88238 | 1.00000 | |
RegenerationR4 | 0.488 | 4.186 | 0.14651 | 0.57273 | |
RegenerationR5 | 0.251 | 4.186 | 0.41462 | 0.80814 | |
RegenerationR6 | 0.111 | 4.186 | 0.76235 | 0.95750 | |
RegenerationBL | -0.129 | 4.186 | 0.79680 | 1.00000 | |
RegenerationTP | 0.515 | 4.186 | 0.32419 | 0.76838 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_49257 | 739 | 15.4 | Mlig455_033298 | Neo: - Age: - |
MFHAS1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_033298 {REF} {Length: 1564} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=64.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=44.5]; Leucine-rich repeat [PF14580.8, score=29.1]} {Human: ENSG00000147324, MFHAS1, malignant fibrous histiocytoma amplified sequence 1, [Score=102, Expect=4e-23]; ENSG00000285022, AC270282.1, malignant fibrous histiocytoma amplified sequence 1, [Score=102, Expect=4e-23]} {Mouse: ENSMUSG00000070056, Mfhas1, malignant fibrous histiocytoma amplified sequence 1, [Score=94.7, Expect=1e-20]} {Dmel: FBgn0263289, scrib, scribbled, [Score=87.8, Expect=2e-18]} {Celegans: WBGene00004929, soc-2, Leucine-rich repeat protein soc-2, [Score=85.1, Expect=8e-18]} {Smed: dd_Smed_v6_11443_0_1, dd_Smed_v6_11443_0_1, [RH, Score=102, Expect=7e-25]} {RNA1509_32286, RNA1509_43570} {RNA1310_22536.1, RNA1509_32286, RNA1509_43570} {RNA1509_32286, RNA1509_43570, RNA815_11933} |
2. | MligTC455_25217 | 983 | 20.49 | Mlig455_014480 | Neo: - Age: logFC(26M/2M)=-0.277 |
FHAD1 | 1.82 | - | - | 0.854 | - | - | 0.966 | Mlig455_014480 {REF} {Length: 4999} {TRANSSPLICED} {Pfam: FHA domain [PF00498.28, score=39.7]; Inner membrane component of T3SS, cytoplasmic domain [PF16697.7, score=24.9]} {Human: ENSG00000142621, FHAD1, forkhead associated phosphopeptide binding domain 1, [RH, Score=215, Expect=9e-56]} {Mouse: ENSMUSG00000051435, Fhad1, forkhead-associated (FHA) phosphopeptide binding domain 1, [RH, Score=182, Expect=1e-45]; ENSMUSG00000116181, Fhad1, forkhead-associated (FHA) phosphopeptide binding domain 1, [RH, Score=182, Expect=1e-45]} {Smed: dd_Smed_v6_14350_0_1, dd_Smed_v6_14350_0_1, [Score=346, Expect=1e-98]} {RNA1509_3924} {RNA1310_1575.2} {RNA815_2279} |
3. | MligTC455_52734 | 555 | 11.57 | Mlig455_038511 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.535 Region-specific R2: 2.258 Region-enriched R2: 2.161/0.00016 |
RBM12B | 1.805 | - | - | - | 0.848 | - | 0.957 | Mlig455_038511 {REF} {Length: 3692} {Pfam: Otopetrin [PF03189.15, score=53.6]} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=63.5, Expect=2e-09]} {RNA1509_57555} {RNA1310_7630.2} {RNA815_2303} |
4. | MligTC455_42966 | 424 | 8.83 | Mlig455_065372 | Neo: - Age: logFC(26M/2M)=-0.345 |
SPATA6L | 1.778 | - | - | - | 0.815 | - | 0.963 | Mlig455_065372 {REF} {Length: 3682} {TRANSSPLICED} {Pfam: Spermatogenesis-assoc protein 6 [PF14909.8, score=127.3]} {Human: ENSG00000106686, SPATA6L, spermatogenesis associated 6 like, [RH, Score=95.9, Expect=8e-22]} {Mouse: ENSMUSG00000064202, 4430402I18Rik, RIKEN cDNA 4430402I18 gene, [RH, Score=100, Expect=6e-23]} {Smed: dd_Smed_v6_10543_0_1, dd_Smed_v6_10543_0_1, [RH, Score=186, Expect=1e-55]} {RNA1509_23645} {RNA1310_24559, RNA1509_23645} {RNA1509_23645, RNA815_31401} |
5. | MligTC455_22253 | 696 | 14.5 | Mlig455_039989 | Neo: - Age: - |
H2AFY | 1.77 | - | - | - | 0.969 | 0.801 | - | Mlig455_039989 {REF} {Length: 2087} {TRANSSPLICED} {Pfam: Macro domain [PF01661.23, score=74.1]; C-terminus of histone H2A [PF16211.7, score=47.3]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=33.0]} {Human: ENSG00000113648, H2AFY, H2A histone family member Y, [RH, Score=280, Expect=4e-91]} {Mouse: ENSMUSG00000015937, H2afy, H2A histone family, member Y, [RH, Score=280, Expect=3e-91]} {Dmel: FBgn0053853, His2A:CG33853, [Score=125, Expect=5e-35]} {Celegans: WBGene00001909, his-35, Histone H2A, [Score=118, Expect=2e-32]} {Smed: dd_Smed_v6_4487_0_1, dd_Smed_v6_4487_0_1, [RH, Score=241, Expect=2e-76]} {RNA1509_21701} {RNA1310_14229, RNA1509_21701} {RNA1509_21701, RNA815_13070} |
6. | MligTC455_40419 | 6115 | 127.39 | Mlig455_055666 | Neo: - Age: Down-Down-Up Region-enriched R4: 1.043/0.00005 Regeneration-depleted R4: -1.023 |
PIH1D1 | 1.738 | - | - | - | 0.774 | - | 0.964 | Mlig455_055666 {REF} {Length: 3753} {Pfam: PIH1 N-terminal domain [PF08190.14, score=96.7]; PIH1 CS-like domain [PF18201.3, score=47.8]} {Human: ENSG00000104872, PIH1D1, PIH1 domain containing 1, [RH, Score=136, Expect=2e-36]} {Mouse: ENSMUSG00000003423, Pih1d1, PIH1 domain containing 1, [RH, Score=147, Expect=1e-40]} {Dmel: FBgn0032455, Pih1D1, [RH, Score=116, Expect=7e-29]} {Smed: dd_Smed_v6_7684_0_1, dd_Smed_v6_7684_0_1, [RH, Score=189, Expect=2e-56]} {RNA1509_28944, RNA1509_57670} {RNA1310_29390.1, RNA1509_57670} {RNA1509_57670, RNA815_11271.1} |
7. | MligTC455_52579 | 638 | 13.29 | Mlig455_000801 | Neo: - Age: - |
CAPN11 | 1.732 | - | - | - | 0.766 | - | 0.966 | Mlig455_000801 {REF} {Length: 2780} {Pfam: Calpain family cysteine protease [PF00648.23, score=316.9]; Calpain large subunit, domain III [PF01067.24, score=84.3]} {Human: ENSG00000137225, CAPN11, calpain 11, [Score=283, Expect=5e-87]; ENSG00000162909, CAPN2, calpain 2, [Score=278, Expect=2e-85]; ENSG00000203697, CAPN8, calpain 8, [Score=275, Expect=5e-84]; ENSG00000014216, CAPN1, calpain 1, [Score=273, Expect=3e-83]; ENSG00000135773, CAPN9, calpain 9, [Score=272, Expect=4e-83]; ENSG00000092529, CAPN3, calpain 3, [Score=271, Expect=2e-82]} {Mouse: ENSMUSG00000026509, Capn2, calpain 2, [Score=275, Expect=4e-84]; ENSMUSG00000024942, Capn1, calpain 1, [Score=273, Expect=2e-83]; ENSMUSG00000038599, Capn8, calpain 8, [Score=273, Expect=1e-83]; ENSMUSG00000058626, Capn11, calpain 11, [Score=271, Expect=1e-82]; ENSMUSG00000079110, Capn3, calpain 3, [Score=270, Expect=2e-82]; ENSMUSG00000035547, Capn5, calpain 5, [Score=269, Expect=1e-82]; ENSMUSG00000031981, Capn9, calpain 9, [Score=265, Expect=2e-80]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=323, Expect=3e-104]} {Celegans: WBGene00000546, clp-6, CaLPain family, [Score=280, Expect=3e-87]} {Smed: dd_Smed_v6_1752_0_4, dd_Smed_v6_1752_0_4, [Score=302, Expect=2e-94]} {RNA1509_24213, RNA1509_39830} {RNA1310_15231, RNA1509_24213, RNA1509_39830} {RNA1509_24213, RNA1509_39830, RNA815_6675} |
8. | MligTC455_51626 | 987 | 20.57 | Mlig455_013225, Mlig455_013252, Mlig455_013320 | Neo: - Age: logFC(26M/2M)=-0.416 |
NRG2 | 1.712 | - | - | 0.749 | - | - | 0.963 | Mlig455_013225 {REF} {Length: 3859} {Pfam: Immunoglobulin domain [PF13927.8, score=39.3]; Immunoglobulin I-set domain [PF07679.18, score=32.1]; Immunoglobulin domain [PF00047.27, score=29.5]; Immunoglobulin domain [PF13895.8, score=27.4]} {Human: ENSG00000158458, NRG2, neuregulin 2, [RH, Score=99.0, Expect=8e-21]} {Mouse: ENSMUSG00000060275, Nrg2, neuregulin 2, [RH, Score=93.2, Expect=7e-20]} {Dmel: FBgn0003984, vn, vein, [Score=65.9, Expect=6e-11]} {RNA1509_20317} {RNA1310_6062.1} {RNA815_3326.1} Mlig455_013252 {REF} {Length: 3213} {Pfam: Immunoglobulin domain [PF13927.8, score=38.7]; Immunoglobulin I-set domain [PF07679.18, score=31.7]; Immunoglobulin domain [PF00047.27, score=29.2]; Immunoglobulin domain [PF13895.8, score=27.3]} {Human: ENSG00000158458, NRG2, neuregulin 2, [Score=98.2, Expect=2e-20]} {Mouse: ENSMUSG00000060275, Nrg2, neuregulin 2, [Score=92.4, Expect=6e-19]} {Dmel: FBgn0003984, vn, vein, [Score=65.1, Expect=1e-10]} {RNA1509_20317} {RNA1310_18314.1} {RNA815_3326.1} Mlig455_013320 {REF} {Length: 4084} {Pfam: Immunoglobulin domain [PF13927.8, score=38.9]; Immunoglobulin I-set domain [PF07679.18, score=31.8]; Immunoglobulin domain [PF00047.27, score=29.3]; Immunoglobulin domain [PF13895.8, score=27.4]} {Human: ENSG00000158458, NRG2, neuregulin 2, [RH, Score=99.8, Expect=5e-21]} {Mouse: ENSMUSG00000060275, Nrg2, neuregulin 2, [RH, Score=93.6, Expect=6e-20]} {Dmel: FBgn0003984, vn, vein, [Score=65.9, Expect=7e-11]} {RNA1509_20317} {RNA1310_6062.1, RNA1509_20317} {RNA1509_20317, RNA815_3326.1} |
9. | MligTC455_37308 | 1663 | 34.65 | Mlig455_040453 | Neo: - |
ARRDC1 | 1.709 | - | - | 0.759 | - | - | 0.950 | Mlig455_040453 {REF} {Length: 2316} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=81.2]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=63.8]} {Human: ENSG00000197070, ARRDC1, arrestin domain containing 1, [Score=80.5, Expect=1e-15]; ENSG00000140450, ARRDC4, arrestin domain containing 4, [Score=78.6, Expect=7e-15]} {Mouse: ENSMUSG00000026972, Arrdc1, arrestin domain containing 1, [Score=73.6, Expect=2e-13]} {Dmel: FBgn0035103, Vdup1, Vitamin D[[3]] up-regulated protein 1, [Score=90.9, Expect=1e-19]} {Celegans: WBGene00018060, arrd-18, ARRestin Domain protein, [Score=65.1, Expect=5e-11]} {RNA1509_2401, RNA1509_53571} {RNA1310_27725, RNA1509_53571} {RNA1509_53571, RNA815_11006.1} |
10. | MligTC455_45179 | 4166 | 86.78 | Mlig455_048432 | Neo: - |
CFAP20 | 1.706 | - | - | - | 0.954 | - | 0.752 | Mlig455_048432 {REF} {Length: 1648} {Pfam: Protein of unknown function (DUF667) [PF05018.15, score=310.7]} {Human: ENSG00000070761, CFAP20, cilia and flagella associated protein 20, [RH, Score=367, Expect=4e-131]} {Mouse: ENSMUSG00000031796, Cfap20, cilia and flagella associated protein 20, [RH, Score=370, Expect=2e-132]} {Dmel: FBgn0032248, Bug22, Basal body up regulated gene 22, [RH, Score=368, Expect=9e-132]} {Celegans: WBGene00008288, C54C6.6, Cilia- and flagella-associated protein 20, [RH, Score=345, Expect=1e-122]} {Smed: dd_Smed_v6_4843_0_1, dd_Smed_v6_4843_0_1, [RH, Score=362, Expect=2e-129]} {RNA1509_1898} {RNA1310_20376.1} {RNA815_8129.1} |
11. | MligTC455_47441 | 543 | 11.32 | Mlig455_045866 | Neo: - Age: - |
1.706 | - | - | 0.756 | - | - | 0.950 | Mlig455_045866 {REF} {Length: 2993} {TRANSSPLICED} {Smed: dd_Smed_v6_11834_0_1, dd_Smed_v6_11834_0_1, [RH, Score=173, Expect=4e-47]} {RNA1509_34658, RNA1509_4754} {RNA1310_5693.1, RNA1509_34658, RNA1509_4754} {RNA1509_34658, RNA1509_4754, RNA815_2001} | |
12. | MligTC455_50361 | 844 | 17.58 | Mlig455_000622 | Neo: - Age: Down-Up-Down |
DUSP22 | 0.976 | - | - | - | 0.976 | - | - | Mlig455_000622 {REF} {Length: 2298} {TRANSSPLICED} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=89.4]} {Human: ENSG00000112679, DUSP22, dual specificity phosphatase 22, [RH, Score=119, Expect=1e-32]} {Mouse: ENSMUSG00000069255, Dusp22, dual specificity phosphatase 22, [RH, Score=120, Expect=3e-33]} {Dmel: FBgn0036369, CG10089, [RH, Score=103, Expect=6e-25]} {Celegans: WBGene00006923, vhp-1, Tyrosine-protein phosphatase vhp-1, [Score=86.3, Expect=6e-19]} {Smed: dd_Smed_v6_4044_0_1, dd_Smed_v6_4044_0_1, [RH, Score=110, Expect=1e-28]} {RNA1509_21493, RNA1509_48380} {RNA1310_34562, RNA1509_21493, RNA1509_48380} {RNA1509_21493, RNA1509_48380, RNA815_16504} |
13. | MligTC455_52589 | 87 | 1.82 | Mlig455_059209 | Neo: - Age: - |
0.967 | - | - | - | - | 0.967 | - | Mlig455_059209 {REF} {Length: 2113} {NoTransDecoderORF} {RNA1509_49308} {RNA1310_53726} {RNA815_13935.1} | |
14. | MligTC455_44463 | 494 | 10.29 | Mlig455_051981 | Neo: - Age: - |
NPHP1 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_051981 {REF} {Length: 3299} {Pfam: SH3 domain [PF00018.30, score=39.9]; Variant SH3 domain [PF14604.8, score=34.6]; Variant SH3 domain [PF07653.19, score=26.3]} {Human: ENSG00000144061, NPHP1, nephrocystin 1, [RH, Score=219, Expect=1e-60]} {Mouse: ENSMUSG00000027378, Nphp1, nephronophthisis 1 (juvenile) homolog (human), [RH, Score=207, Expect=9e-57]} {Dmel: FBgn0263456, nwk, nervous wreck, [RH, Score=58.5, Expect=2e-08]} {Celegans: WBGene00010898, nphp-1, Nephrocystin-1-like protein, [Score=99.4, Expect=3e-21]} {Smed: dd_Smed_v6_9990_0_1, dd_Smed_v6_9990_0_1, [RH, Score=238, Expect=3e-66]} {RNA1509_32961, RNA1509_37905} {RNA1310_9260.1, RNA1509_37905} {RNA1509_37905, RNA815_7363} |
15. | MligTC455_22570 | 261 | 5.44 | Mlig455_006659 | Neo: - Age: - Region-enriched R2: 3.042/0.02689 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_006659 {REF} {Length: 918} {NoTransDecoderORF} {RNA1509_10005} {RNA1310_56340} {RNA815_38610} | |
16. | MligTC455_49041 | 412 | 8.58 | Mlig455_023995 | Neo: - Age: logFC(26M/2M)=-0.272 |
WDR93 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_023995 {REF} {Length: 3006} {TRANSSPLICED} {Human: ENSG00000140527, WDR93, WD repeat domain 93, [RH, Score=131, Expect=5e-31]} {Mouse: ENSMUSG00000039099, Wdr93, WD repeat domain 93, [RH, Score=127, Expect=6e-30]} {RNA1509_50462} {RNA1310_8606} {RNA815_1084.1} |