TomoSeq data search

Data search

Results for MligTC455_49872

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_49872	7	0.15	Mlig455_069574	Neo: - Age: -	CHRM4	Mlig455_069574 {REF} {Length: 3648} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=158.8]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=61.4]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=36.4]} {Human: ENSG00000180720, CHRM4, cholinergic receptor muscarinic 4, [Score=161, Expect=8e-43]; ENSG00000184984, CHRM5, cholinergic receptor muscarinic 5, [Score=156, Expect=8e-41]; ENSG00000133019, CHRM3, cholinergic receptor muscarinic 3, [Score=156, Expect=1e-40]; ENSG00000181072, CHRM2, cholinergic receptor muscarinic 2, [Score=154, Expect=1e-40]; ENSG00000168539, CHRM1, cholinergic receptor muscarinic 1, [Score=154, Expect=1e-40]} {Mouse: ENSMUSG00000040495, Chrm4, cholinergic receptor, muscarinic 4, [Score=162, Expect=2e-43]; ENSMUSG00000046159, Chrm3, cholinergic receptor, muscarinic 3, cardiac, [Score=157, Expect=6e-41]; ENSMUSG00000045613, Chrm2, cholinergic receptor, muscarinic 2, cardiac, [Score=156, Expect=2e-41]; ENSMUSG00000074939, Chrm5, cholinergic receptor, muscarinic 5, [Score=154, Expect=4e-40]; ENSMUSG00000032773, Chrm1, cholinergic receptor, muscarinic 1, CNS, [Score=154, Expect=8e-41]} {Dmel: FBgn0037546, mAChR-B, muscarinic Acetylcholine Receptor, B-type, [RH, Score=244, Expect=4e-70]} {Celegans: WBGene00001518, gar-2, Probable muscarinic acetylcholine receptor gar-2, [RH, Score=196, Expect=2e-54]} {Smed: dd_Smed_v6_13962_0_1, dd_Smed_v6_13962_0_1, [Score=321, Expect=4e-101]} {RNA1310_12338} {RNA815_52171}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_49872

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.803	0.629	0.99959	1.00000
RegionR2	1.109	0.629	0.99989	1.00000
RegionR3	1.568	0.629	0.99992	1.00000
RegionR4	0.147	0.629	0.99989	1.00000
RegionR5	1.516	0.629	0.99989	1.00000
RegionR6	1.196	0.629	0.99990	1.00000
RegionR7	0.173	0.629	0.99996	1.00000
RegionR8	-1.906	0.629	0.99979	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.128	0.629	0.99997	1.00000
RegenerationR2	1.73	0.629	0.45803	0.85143
RegenerationR3	3.066	0.629	0.05165	0.39399
RegenerationR4	2.276	0.629	0.11393	0.51663
RegenerationR5	-0.518	0.629	0.99996	1.00000
RegenerationR6	1.343	0.629	0.26993	0.62037
RegenerationBL	0.074	0.629	0.99994	1.00000
RegenerationTP	0.538	0.629	1.00000	1.00000

Genes with expression patterns similar to MligTC455_49872

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_49872	7	0.15	Mlig455_069574	Neo: - Age: -	CHRM4	2	-	-	-	1.000	1.000	-	Mlig455_069574 {REF} {Length: 3648} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=158.8]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=61.4]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=36.4]} {Human: ENSG00000180720, CHRM4, cholinergic receptor muscarinic 4, [Score=161, Expect=8e-43]; ENSG00000184984, CHRM5, cholinergic receptor muscarinic 5, [Score=156, Expect=8e-41]; ENSG00000133019, CHRM3, cholinergic receptor muscarinic 3, [Score=156, Expect=1e-40]; ENSG00000181072, CHRM2, cholinergic receptor muscarinic 2, [Score=154, Expect=1e-40]; ENSG00000168539, CHRM1, cholinergic receptor muscarinic 1, [Score=154, Expect=1e-40]} {Mouse: ENSMUSG00000040495, Chrm4, cholinergic receptor, muscarinic 4, [Score=162, Expect=2e-43]; ENSMUSG00000046159, Chrm3, cholinergic receptor, muscarinic 3, cardiac, [Score=157, Expect=6e-41]; ENSMUSG00000045613, Chrm2, cholinergic receptor, muscarinic 2, cardiac, [Score=156, Expect=2e-41]; ENSMUSG00000074939, Chrm5, cholinergic receptor, muscarinic 5, [Score=154, Expect=4e-40]; ENSMUSG00000032773, Chrm1, cholinergic receptor, muscarinic 1, CNS, [Score=154, Expect=8e-41]} {Dmel: FBgn0037546, mAChR-B, muscarinic Acetylcholine Receptor, B-type, [RH, Score=244, Expect=4e-70]} {Celegans: WBGene00001518, gar-2, Probable muscarinic acetylcholine receptor gar-2, [RH, Score=196, Expect=2e-54]} {Smed: dd_Smed_v6_13962_0_1, dd_Smed_v6_13962_0_1, [Score=321, Expect=4e-101]} {RNA1310_12338} {RNA815_52171}
2.	MligTC455_11166	137	2.85	Mlig455_001472	Neo: - Age: Up-Up-Down		1.832	-	-	-	0.966	0.866	-	Mlig455_001472 {REF} {Length: 3543} {Pfam: Beta-lactamase [PF00144.26, score=76.3]} {RNA1509_17855} {RNA1310_14062, RNA1509_17855} {RNA1509_17855, RNA815_7859}
3.	MligTC455_04548	10	0.21	Mlig455_047007	Neo: - Age: -	TYMP	1.683	-	-	-	0.954	0.729	-	Mlig455_047007 {REF} {Length: 1462} {TRANSSPLICED} {Pfam: Glycosyl transferase family, a/b domain [PF00591.23, score=114.4]; Glycosyl transferase family, helical bundle domain [PF02885.19, score=55.5]; Pyrimidine nucleoside phosphorylase C-terminal domain [PF07831.15, score=27.3]} {Human: ENSG00000025708, TYMP, thymidine phosphorylase, [RH, Score=324, Expect=7e-106]} {Mouse: ENSMUSG00000022615, Tymp, thymidine phosphorylase, [RH, Score=320, Expect=1e-104]} {Smed: dd_Smed_v6_869_0_1, dd_Smed_v6_869_0_1, [RH, Score=323, Expect=2e-106]} {RNA1509_12879} {RNA1310_15453} {RNA815_1859}
4.	MligTC455_01492	21	0.43	Mlig455_051717	Neo: - Age: -		1.667	-	-	-	0.955	0.712	-	Mlig455_051717 {REF} {Length: 712} {NoTransDecoderORF}
5.	MligTC455_54461	21	0.43	Mlig455_026728	Neo: - Age: -		1.667	-	-	-	0.955	0.712	-	Mlig455_026728 {REF} {Length: 717} {NoTransDecoderORF}
6.	MligTC455_14539	5	0.11	Mlig455_041840	Neo: - Age: -		0.997	-	-	-	-	0.997	-	Mlig455_041840 {REF} {Length: 577} {NoTransDecoderORF}
7.	MligTC455_22974	13	0.27	Mlig455_042585	Neo: - Age: -		0.997	-	-	-	-	0.997	-	Mlig455_042585 {REF} {Length: 736} {NoTransDecoderORF} {RNA1310_129121}
8.	MligTC455_10288	17	0.35	Mlig455_019678	Neo: - Age: -		0.996	-	-	-	0.996	-	-	Mlig455_019678 {REF} {Length: 1244} {NoTransDecoderORF} {RNA1509_44393} {RNA1310_97891}
9.	MligTC455_14402	11	0.22	Mlig455_011148	Neo: - Age: -		0.993	-	-	-	-	0.993	-	Mlig455_011148 {REF} {Length: 418} {NoTransDecoderORF} {RNA1509_36286} {RNA1310_44724} {RNA815_44450}
10.	MligTC455_28057	20	0.41	Mlig455_039805	Neo: - Age: -	PLS3	0.987	-	-	-	-	0.987	-	Mlig455_039805 {REF} {Length: 2968} {Pfam: Calponin homology (CH) domain [PF00307.33, score=221.2]; CAMSAP CH domain [PF11971.10, score=31.6]} {Human: ENSG00000102024, PLS3, plastin 3, [Score=421, Expect=1e-138]; ENSG00000136167, LCP1, lymphocyte cytosolic protein 1, [Score=414, Expect=3e-136]; ENSG00000120756, PLS1, plastin 1, [Score=410, Expect=1e-134]} {Mouse: ENSMUSG00000021998, Lcp1, lymphocyte cytosolic protein 1, [Score=429, Expect=5e-142]; ENSMUSG00000049493, Pls1, plastin 1 (I-isoform), [Score=427, Expect=1e-141]; ENSMUSG00000016382, Pls3, plastin 3 (T-isoform), [Score=416, Expect=3e-137]} {Dmel: FBgn0024238, Fim, Fimbrin, [Score=459, Expect=5e-154]} {Celegans: WBGene00022425, plst-1, PLaSTin (Actin bundling protein) homolog, [Score=281, Expect=9e-89]} {Smed: dd_Smed_v6_749_0_1, dd_Smed_v6_749_0_1, [Score=531, Expect=0.0]} {RNA1310_72796} {RNA815_49322}
11.	MligTC455_50339	6	0.13	Mlig455_042694	Neo: - Age: -		0.981	-	-	-	-	0.981	-	Mlig455_042694 {REF} {Length: 427} {NoTransDecoderORF} {RNA1509_18266} {RNA1310_68164} {RNA815_60885}
12.	MligTC455_42393	11	0.23	Mlig455_037119	Neo: - Age: -		0.968	-	-	-	0.968	-	-	Mlig455_037119 {REF} {Length: 2722} {NoTransDecoderORF} {RNA1509_55284} {RNA1310_61594, RNA1509_55284} {RNA1509_55284, RNA815_11130}
13.	MligTC455_13416	16	0.33	Mlig455_046199	Neo: - Age: -		0.966	-	-	-	0.966	-	-	Mlig455_046199 {REF} {Length: 168} {NoTransDecoderORF}
14.	MligTC455_51090	20	0.42	Mlig455_019411	Neo: - Age: -	TTN	0.966	-	-	-	-	0.966	-	Mlig455_019411 {REF} {Length: 2557} {Pfam: Immunoglobulin domain [PF13927.8, score=55.3]; Immunoglobulin I-set domain [PF07679.18, score=54.2]; Immunoglobulin domain [PF00047.27, score=42.6]; Immunoglobulin domain [PF13895.8, score=41.5]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=23.2]} {Human: ENSG00000155657, TTN, titin, [Score=57.4, Expect=7e-08]; ENSG00000163531, NFASC, neurofascin, [Score=56.6, Expect=6e-08]; ENSG00000174498, IGDCC3, immunoglobulin superfamily DCC subclass member 3, [Score=55.1, Expect=2e-07]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=56.6, Expect=8e-08]; ENSMUSG00000026442, Nfasc, neurofascin, [Score=56.2, Expect=8e-08]; ENSMUSG00000061751, Kalrn, kalirin, RhoGEF kinase, [Score=55.5, Expect=1e-07]; ENSMUSG00000032394, Igdcc3, immunoglobulin superfamily, DCC subclass, member 3, [Score=53.9, Expect=3e-07]} {Dmel: FBgn0264975, Nrg, Neuroglian, [Score=57.8, Expect=2e-08]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=50.4, Expect=3e-06]} {Smed: dd_Smed_v6_15129_0_2, dd_Smed_v6_15129_0_2, [RH, Score=97.4, Expect=8e-22]} {RNA1509_60115} {RNA1310_47926.1} {RNA815_39809}
15.	MligTC455_53582	22	0.46	Mlig455_067135	Neo: - Age: -	ZAN	0.964	-	-	-	0.964	-	-	Mlig455_067135 {REF} {Length: 2659} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=68.2, Expect=4e-11]} {Mouse: ENSMUSG00000079173, Zan, zonadhesin, [Score=53.1, Expect=1e-06]} {RNA1310_113822} {RNA815_58009}
16.	MligTC455_39035	8	0.17	Mlig455_025604	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_025604 {REF} {Length: 1988} {NoTransDecoderORF} {RNA1509_51255} {RNA1310_60503} {RNA815_39433}
17.	MligTC455_27665	22	0.47	Mlig455_007729, Mlig455_016843, Mlig455_016844, Mlig455_021085	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_007729 {REF} {Length: 1448} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=97.9]} {RNA1509_7562} {RNA1310_912.1} {RNA815_1193} Mlig455_016843 {REF} {Length: 4622} {TRANSSPLICED} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=92.9]; OTU-like cysteine protease [PF02338.21, score=24.8]; Peptidase C65 Otubain [PF10275.11, score=19.8]} {RNA1509_7562} {RNA1310_912.1} {RNA815_1193} Mlig455_016844 {REF} {Length: 3082} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=94.1]; OTU-like cysteine protease [PF02338.21, score=24.7]; Peptidase C65 Otubain [PF10275.11, score=20.5]} {RNA1509_2607} {RNA1310_912.1} {RNA815_1193} Mlig455_021085 {REF} {Length: 6571} {TRANSSPLICED} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=92.9]; OTU-like cysteine protease [PF02338.21, score=24.9]; Peptidase C65 Otubain [PF10275.11, score=19.8]} {RNA1509_2607} {RNA1310_912.1} {RNA815_1193}
18.	MligTC455_07469	44	0.92	Mlig455_053361	Neo: - Age: Up-Up-Down	DLX1	0.958	-	-	-	0.958	-	-	Mlig455_053361 {REF} {Length: 1777} {Pfam: Homeodomain [PF00046.31, score=72.7]} {Human: ENSG00000144355, DLX1, distal-less homeobox 1, [RH, Score=142, Expect=3e-39]} {Mouse: ENSMUSG00000041911, Dlx1, distal-less homeobox 1, [RH, Score=142, Expect=2e-39]; ENSMUSG00000029754, Dlx6, distal-less homeobox 6, [RH, Score=137, Expect=3e-37]} {Dmel: FBgn0000157, Dll, Distal-less, [RH, Score=138, Expect=1e-37]} {Celegans: WBGene00000463, ceh-43, Homeobox protein ceh-43, [RH, Score=102, Expect=6e-25]} {Smed: dd_Smed_v6_19040_0_1, dd_Smed_v6_19040_0_1, [RH, Score=159, Expect=7e-44]} {RNA1509_39701} {RNA1310_24974} {RNA815_26393}
19.	MligTC455_29311	38	0.79	Mlig455_036659	Neo: - Age: - Region-enriched R4: 5.181/0.01948 Region-enriched R5: 4.507/0.01647		0.957	-	-	-	-	0.957	-	Mlig455_036659 {REF} {Length: 559} {TRANSSPLICED} {RNA1310_66594.1} {RNA815_40011}
20.	MligTC455_19933	97	2.02	Mlig455_001682, Mlig455_063300	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_001682 {REF} {Length: 2261} {RNA1310_31610.1} {RNA815_12378} Mlig455_063300 {REF} {Length: 2752} {RNA1310_31610.1} {RNA815_12378}
21.	MligTC455_25794	22	0.47	Mlig455_007596	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_007596 {REF} {Length: 1286} {Smed: dd_Smed_v6_91651_0_1, dd_Smed_v6_91651_0_1, [RH, Score=54.7, Expect=7e-10]} {RNA1509_46103} {RNA1310_6410.1} {RNA815_31889}
22.	MligTC455_23635	11	0.22	Mlig455_067931	Neo: Germline Age: -		0.95	-	-	-	-	0.950	-	Mlig455_067931 {REF} {Length: 2254} {RNA1509_46642} {RNA1310_7864} {RNA815_30316}
23.	MligTC455_37952	38	0.79	Mlig455_024539	Neo: - Age: -	GNB1L	0.95	-	-	-	-	0.950	-	Mlig455_024539 {REF} {Length: 2044} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=39.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=21.4]} {Human: ENSG00000185838, GNB1L, G protein subunit beta 1 like, [RH, Score=110, Expect=3e-27]} {Mouse: ENSMUSG00000000884, Gnb1l, guanine nucleotide binding protein (G protein), beta polypeptide 1-like, [RH, Score=115, Expect=2e-29]} {Dmel: FBgn0033653, CG13192, [RH, Score=74.7, Expect=6e-15]} {Smed: dd_Smed_v6_9087_0_1, dd_Smed_v6_9087_0_1, [RH, Score=68.2, Expect=6e-13]} {RNA1509_25342} {RNA1310_63202} {RNA815_29154}