TomoSeq data search

Data search

Results for MligTC455_50401

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50401

469

9.78

Mlig455_015579

Neo: -

Age: logFC(26M/2M)=0.546

Region-enriched R5: 1.771/0.02463

SLC36A1

Mlig455_015579 {REF} {Length: 4299} {TRANSSPLICED} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=224.6]; Pex2 / Pex12 amino terminal region [PF04757.16, score=65.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.8]; Ring finger domain [PF13639.8, score=27.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.7]} {Human: ENSG00000123643, SLC36A1, solute carrier family 36 member 1, [RH, Score=269, Expect=1e-80]; ENSG00000180773, SLC36A4, solute carrier family 36 member 4, [RH, Score=267, Expect=2e-79]; ENSG00000186335, SLC36A2, solute carrier family 36 member 2, [RH, Score=257, Expect=4e-76]} {Mouse: ENSMUSG00000043885, Slc36a4, solute carrier family 36 (proton/amino acid symporter), member 4, [RH, Score=267, Expect=1e-79]; ENSMUSG00000020264, Slc36a2, solute carrier family 36 (proton/amino acid symporter), member 2, [RH, Score=256, Expect=8e-76]} {Dmel: FBgn0032036, CG13384, [RH, Score=287, Expect=2e-87]} {Celegans: WBGene00012804, Y43F4B.7, [Score=203, Expect=4e-57]} {Smed: dd_Smed_v6_2596_0_1, dd_Smed_v6_2596_0_1, [RH, Score=174, Expect=5e-49]} {RNA1509_7502} {RNA1310_14780.1} {RNA815_6885}

Cumulative graph for MligTC455_50401

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.911	3.734	0.13959	0.74716
RegionR2	1.088	3.734	0.19375	0.55087
RegionR3	0.317	3.734	0.69939	1.00000
RegionR4	1.778	3.734	0.01695	0.09058
RegionR5	1.771	3.734	0.00317	0.02463
RegionR6	0.875	3.734	0.29603	0.88776
RegionR7	0.366	3.734	0.69603	1.00000
RegionR8	-0.284	3.734	0.92749	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.819	3.734	0.99991	1.00000
RegenerationR2	-0.167	3.734	0.66058	0.94182
RegenerationR3	0.692	3.734	0.14560	0.57291
RegenerationR4	-0.015	3.734	0.97199	1.00000
RegenerationR5	0.183	3.734	0.64391	0.92938
RegenerationR6	0.328	3.734	0.49020	0.79914
RegenerationBL	1.006	3.734	0.09863	0.36893
RegenerationTP	1.556	3.734	0.02793	0.28183

Genes with expression patterns similar to MligTC455_50401

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50401	469	9.78	Mlig455_015579	Neo: - Age: logFC(26M/2M)=0.546 Region-enriched R5: 1.771/0.02463	SLC36A1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015579 {REF} {Length: 4299} {TRANSSPLICED} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=224.6]; Pex2 / Pex12 amino terminal region [PF04757.16, score=65.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.8]; Ring finger domain [PF13639.8, score=27.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.7]} {Human: ENSG00000123643, SLC36A1, solute carrier family 36 member 1, [RH, Score=269, Expect=1e-80]; ENSG00000180773, SLC36A4, solute carrier family 36 member 4, [RH, Score=267, Expect=2e-79]; ENSG00000186335, SLC36A2, solute carrier family 36 member 2, [RH, Score=257, Expect=4e-76]} {Mouse: ENSMUSG00000043885, Slc36a4, solute carrier family 36 (proton/amino acid symporter), member 4, [RH, Score=267, Expect=1e-79]; ENSMUSG00000020264, Slc36a2, solute carrier family 36 (proton/amino acid symporter), member 2, [RH, Score=256, Expect=8e-76]} {Dmel: FBgn0032036, CG13384, [RH, Score=287, Expect=2e-87]} {Celegans: WBGene00012804, Y43F4B.7, [Score=203, Expect=4e-57]} {Smed: dd_Smed_v6_2596_0_1, dd_Smed_v6_2596_0_1, [RH, Score=174, Expect=5e-49]} {RNA1509_7502} {RNA1310_14780.1} {RNA815_6885}
2.	MligTC455_54027	1166	24.29	Mlig455_044233, Mlig455_044252	Neo: - Age: -	ZNF619	0.971	-	-	-	0.971	-	-	Mlig455_044233 {REF} {Length: 6297} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=38.1]; C2H2-type zinc finger [PF13894.8, score=37.8]; Zinc-finger double domain [PF13465.8, score=31.4]; C2H2-type zinc finger [PF13912.8, score=26.4]} {Human: ENSG00000177873, ZNF619, zinc finger protein 619, [Score=65.5, Expect=2e-10]; ENSG00000196705, ZNF431, zinc finger protein 431, [Score=63.5, Expect=6e-10]; ENSG00000256294, ZNF225, zinc finger protein 225, [Score=63.2, Expect=1e-09]; ENSG00000267680, ZNF224, zinc finger protein 224, [Score=62.8, Expect=1e-09]; ENSG00000186026, ZNF284, zinc finger protein 284, [Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000047036, Zfp445, zinc finger protein 445, [Score=68.9, Expect=1e-11]; ENSMUSG00000021510, Zfp729a, zinc finger protein 729a, [Score=67.0, Expect=6e-11]} {Dmel: FBgn0032295, CG12299, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_17476_0_1, dd_Smed_v6_17476_0_1, [RH, Score=94.0, Expect=9e-20]} {RNA1509_4586} {RNA1310_3695, RNA1509_4586} {RNA1509_4586, RNA815_3623} Mlig455_044252 {REF} {Length: 6293} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=38.1]; C2H2-type zinc finger [PF13894.8, score=37.8]; Zinc-finger double domain [PF13465.8, score=31.4]; C2H2-type zinc finger [PF13912.8, score=26.4]} {Human: ENSG00000177873, ZNF619, zinc finger protein 619, [Score=65.5, Expect=2e-10]; ENSG00000196705, ZNF431, zinc finger protein 431, [Score=63.9, Expect=6e-10]; ENSG00000256294, ZNF225, zinc finger protein 225, [Score=63.2, Expect=1e-09]; ENSG00000186026, ZNF284, zinc finger protein 284, [Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000047036, Zfp445, zinc finger protein 445, [Score=68.9, Expect=1e-11]; ENSMUSG00000021510, Zfp729a, zinc finger protein 729a, [Score=67.0, Expect=5e-11]} {Dmel: FBgn0032295, CG12299, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_17476_0_1, dd_Smed_v6_17476_0_1, [RH, Score=92.4, Expect=2e-19]} {RNA1509_4586} {RNA1310_3695} {RNA815_3623}
3.	MligTC455_19672	631	13.14	Mlig455_043272	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_043272 {REF} {Length: 2079} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF00651.33, score=66.1]} {Mouse: ENSMUSG00000035941, Ibtk, inhibitor of Bruton agammaglobulinemia tyrosine kinase, [Score=50.1, Expect=4e-06]} {Dmel: FBgn0030961, CG7058, [Score=59.7, Expect=3e-09]} {Celegans: WBGene00018137, bath-41, BTB and MATH domain-containing protein 41, [Score=48.1, Expect=8e-06]} {Smed: dd_Smed_v6_7778_0_1, dd_Smed_v6_7778_0_1, [Score=73.9, Expect=4e-14]} {RNA1509_8768} {RNA1310_15058, RNA1509_8768} {RNA1509_8768, RNA815_8239}
4.	MligTC455_29174	725	15.11	Mlig455_039689	Neo: - Age: Up-Down-Down	TSPAN15	0.952	-	-	0.952	-	-	-	Mlig455_039689 {REF} {Length: 6002} {Pfam: Tetraspanin family [PF00335.22, score=97.2]} {Human: ENSG00000099282, TSPAN15, tetraspanin 15, [Score=52.8, Expect=2e-07]} {Mouse: ENSMUSG00000025351, Cd63, CD63 antigen, [Score=61.2, Expect=9e-11]} {Dmel: FBgn0029507, Tsp42Ed, Tetraspanin 42Ed, [Score=64.3, Expect=5e-12]} {Celegans: WBGene00006643, tsp-17, TetraSPanin family, [Score=54.3, Expect=1e-08]} {Smed: dd_Smed_v6_2693_0_1, dd_Smed_v6_2693_0_1, [Score=74.7, Expect=6e-16]} {RNA1509_37574, RNA1509_52095} {RNA1310_17930.1, RNA1509_37574, RNA1509_52095} {RNA1509_37574, RNA1509_52095, RNA815_6889}
5.	MligTC455_24194	11878	247.46	Mlig455_012113	Neo: Int S/G2/M Age: Down-Down-Up, logFC(26M/2M)=0.220	RPL8	0.95	-	-	-	-	0.950	-	Mlig455_012113 {REF} {Length: 944} {TRANSSPLICED} {Pfam: Ribosomal Proteins L2, C-terminal domain [PF03947.20, score=154.7]; Ribosomal Proteins L2, RNA binding domain [PF00181.25, score=60.1]} {Human: ENSG00000161016, RPL8, ribosomal protein L8, [RH, Score=414, Expect=7e-148]} {Mouse: ENSMUSG00000003970, Rpl8, ribosomal protein L8, [RH, Score=414, Expect=5e-148]} {Dmel: FBgn0261602, RpL8, Ribosomal protein L8, [RH, Score=410, Expect=1e-146]} {Celegans: WBGene00004413, rpl-2, 60S ribosomal protein L8, [RH, Score=395, Expect=1e-140]} {Smed: dd_Smed_v6_108_0_1, dd_Smed_v6_108_0_1, [RH, Score=399, Expect=2e-142]} {RNA1509_11382, RNA1509_1903, RNA1509_5112, RNA1509_7259} {RNA1310_38364.1, RNA1509_11382, RNA1509_1903, RNA1509_5112, RNA1509_7259} {RNA1509_11382, RNA1509_1903, RNA1509_5112, RNA1509_7259, RNA815_9295.2}

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