TomoSeq data search

Data search

Results for MligTC455_54027

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_54027	1166	24.29	Mlig455_044233, Mlig455_044252	Neo: - Age: -	ZNF619	Mlig455_044233 {REF} {Length: 6297} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=38.1]; C2H2-type zinc finger [PF13894.8, score=37.8]; Zinc-finger double domain [PF13465.8, score=31.4]; C2H2-type zinc finger [PF13912.8, score=26.4]} {Human: ENSG00000177873, ZNF619, zinc finger protein 619, [Score=65.5, Expect=2e-10]; ENSG00000196705, ZNF431, zinc finger protein 431, [Score=63.5, Expect=6e-10]; ENSG00000256294, ZNF225, zinc finger protein 225, [Score=63.2, Expect=1e-09]; ENSG00000267680, ZNF224, zinc finger protein 224, [Score=62.8, Expect=1e-09]; ENSG00000186026, ZNF284, zinc finger protein 284, [Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000047036, Zfp445, zinc finger protein 445, [Score=68.9, Expect=1e-11]; ENSMUSG00000021510, Zfp729a, zinc finger protein 729a, [Score=67.0, Expect=6e-11]} {Dmel: FBgn0032295, CG12299, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_17476_0_1, dd_Smed_v6_17476_0_1, [RH, Score=94.0, Expect=9e-20]} {RNA1509_4586} {RNA1310_3695, RNA1509_4586} {RNA1509_4586, RNA815_3623} Mlig455_044252 {REF} {Length: 6293} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=38.1]; C2H2-type zinc finger [PF13894.8, score=37.8]; Zinc-finger double domain [PF13465.8, score=31.4]; C2H2-type zinc finger [PF13912.8, score=26.4]} {Human: ENSG00000177873, ZNF619, zinc finger protein 619, [Score=65.5, Expect=2e-10]; ENSG00000196705, ZNF431, zinc finger protein 431, [Score=63.9, Expect=6e-10]; ENSG00000256294, ZNF225, zinc finger protein 225, [Score=63.2, Expect=1e-09]; ENSG00000186026, ZNF284, zinc finger protein 284, [Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000047036, Zfp445, zinc finger protein 445, [Score=68.9, Expect=1e-11]; ENSMUSG00000021510, Zfp729a, zinc finger protein 729a, [Score=67.0, Expect=5e-11]} {Dmel: FBgn0032295, CG12299, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_17476_0_1, dd_Smed_v6_17476_0_1, [RH, Score=92.4, Expect=2e-19]} {RNA1509_4586} {RNA1310_3695} {RNA815_3623}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_54027

1166

24.29

Mlig455_044233, Mlig455_044252

Neo: -

Age: -

ZNF619

Mlig455_044233 {REF} {Length: 6297} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=38.1]; C2H2-type zinc finger [PF13894.8, score=37.8]; Zinc-finger double domain [PF13465.8, score=31.4]; C2H2-type zinc finger [PF13912.8, score=26.4]} {Human: ENSG00000177873, ZNF619, zinc finger protein 619, [Score=65.5, Expect=2e-10]; ENSG00000196705, ZNF431, zinc finger protein 431, [Score=63.5, Expect=6e-10]; ENSG00000256294, ZNF225, zinc finger protein 225, [Score=63.2, Expect=1e-09]; ENSG00000267680, ZNF224, zinc finger protein 224, [Score=62.8, Expect=1e-09]; ENSG00000186026, ZNF284, zinc finger protein 284, [Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000047036, Zfp445, zinc finger protein 445, [Score=68.9, Expect=1e-11]; ENSMUSG00000021510, Zfp729a, zinc finger protein 729a, [Score=67.0, Expect=6e-11]} {Dmel: FBgn0032295, CG12299, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_17476_0_1, dd_Smed_v6_17476_0_1, [RH, Score=94.0, Expect=9e-20]} {RNA1509_4586} {RNA1310_3695, RNA1509_4586} {RNA1509_4586, RNA815_3623}

Mlig455_044252 {REF} {Length: 6293} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=38.1]; C2H2-type zinc finger [PF13894.8, score=37.8]; Zinc-finger double domain [PF13465.8, score=31.4]; C2H2-type zinc finger [PF13912.8, score=26.4]} {Human: ENSG00000177873, ZNF619, zinc finger protein 619, [Score=65.5, Expect=2e-10]; ENSG00000196705, ZNF431, zinc finger protein 431, [Score=63.9, Expect=6e-10]; ENSG00000256294, ZNF225, zinc finger protein 225, [Score=63.2, Expect=1e-09]; ENSG00000186026, ZNF284, zinc finger protein 284, [Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000047036, Zfp445, zinc finger protein 445, [Score=68.9, Expect=1e-11]; ENSMUSG00000021510, Zfp729a, zinc finger protein 729a, [Score=67.0, Expect=5e-11]} {Dmel: FBgn0032295, CG12299, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_17476_0_1, dd_Smed_v6_17476_0_1, [RH, Score=92.4, Expect=2e-19]} {RNA1509_4586} {RNA1310_3695} {RNA815_3623}

Cumulative graph for MligTC455_54027

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.045	4.877	0.96733	1.00000
RegionR2	-0.522	4.877	0.28189	0.66836
RegionR3	-0.378	4.877	0.35667	0.89178
RegionR4	1.02	4.877	0.04706	0.18509
RegionR5	0.385	4.877	0.30998	0.64847
RegionR6	-0.301	4.877	0.46238	1.00000
RegionR7	0.607	4.877	0.16969	0.75849
RegionR8	-0.766	4.877	0.22350	0.83133

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.869	4.877	0.58377	1.00000
RegenerationR2	-0.346	4.877	0.43747	0.83871
RegenerationR3	-0.575	4.877	0.22964	0.66434
RegenerationR4	-0.667	4.877	0.18509	0.62629
RegenerationR5	-0.357	4.877	0.42666	0.81563
RegenerationR6	0.448	4.877	0.34847	0.69357
RegenerationBL	-0.426	4.877	0.42512	0.79330
RegenerationTP	-0.442	4.877	0.42901	0.85198

Genes with expression patterns similar to MligTC455_54027

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_54027	1166	24.29	Mlig455_044233, Mlig455_044252	Neo: - Age: -	ZNF619	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_044233 {REF} {Length: 6297} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=38.1]; C2H2-type zinc finger [PF13894.8, score=37.8]; Zinc-finger double domain [PF13465.8, score=31.4]; C2H2-type zinc finger [PF13912.8, score=26.4]} {Human: ENSG00000177873, ZNF619, zinc finger protein 619, [Score=65.5, Expect=2e-10]; ENSG00000196705, ZNF431, zinc finger protein 431, [Score=63.5, Expect=6e-10]; ENSG00000256294, ZNF225, zinc finger protein 225, [Score=63.2, Expect=1e-09]; ENSG00000267680, ZNF224, zinc finger protein 224, [Score=62.8, Expect=1e-09]; ENSG00000186026, ZNF284, zinc finger protein 284, [Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000047036, Zfp445, zinc finger protein 445, [Score=68.9, Expect=1e-11]; ENSMUSG00000021510, Zfp729a, zinc finger protein 729a, [Score=67.0, Expect=6e-11]} {Dmel: FBgn0032295, CG12299, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_17476_0_1, dd_Smed_v6_17476_0_1, [RH, Score=94.0, Expect=9e-20]} {RNA1509_4586} {RNA1310_3695, RNA1509_4586} {RNA1509_4586, RNA815_3623} Mlig455_044252 {REF} {Length: 6293} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=38.1]; C2H2-type zinc finger [PF13894.8, score=37.8]; Zinc-finger double domain [PF13465.8, score=31.4]; C2H2-type zinc finger [PF13912.8, score=26.4]} {Human: ENSG00000177873, ZNF619, zinc finger protein 619, [Score=65.5, Expect=2e-10]; ENSG00000196705, ZNF431, zinc finger protein 431, [Score=63.9, Expect=6e-10]; ENSG00000256294, ZNF225, zinc finger protein 225, [Score=63.2, Expect=1e-09]; ENSG00000186026, ZNF284, zinc finger protein 284, [Score=62.8, Expect=1e-09]} {Mouse: ENSMUSG00000047036, Zfp445, zinc finger protein 445, [Score=68.9, Expect=1e-11]; ENSMUSG00000021510, Zfp729a, zinc finger protein 729a, [Score=67.0, Expect=5e-11]} {Dmel: FBgn0032295, CG12299, [Score=64.3, Expect=2e-10]} {Smed: dd_Smed_v6_17476_0_1, dd_Smed_v6_17476_0_1, [RH, Score=92.4, Expect=2e-19]} {RNA1509_4586} {RNA1310_3695} {RNA815_3623}
2.	MligTC455_50401	469	9.78	Mlig455_015579	Neo: - Age: logFC(26M/2M)=0.546 Region-enriched R5: 1.771/0.02463	SLC36A1	0.971	-	-	-	0.971	-	-	Mlig455_015579 {REF} {Length: 4299} {TRANSSPLICED} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=224.6]; Pex2 / Pex12 amino terminal region [PF04757.16, score=65.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.8]; Ring finger domain [PF13639.8, score=27.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.7]} {Human: ENSG00000123643, SLC36A1, solute carrier family 36 member 1, [RH, Score=269, Expect=1e-80]; ENSG00000180773, SLC36A4, solute carrier family 36 member 4, [RH, Score=267, Expect=2e-79]; ENSG00000186335, SLC36A2, solute carrier family 36 member 2, [RH, Score=257, Expect=4e-76]} {Mouse: ENSMUSG00000043885, Slc36a4, solute carrier family 36 (proton/amino acid symporter), member 4, [RH, Score=267, Expect=1e-79]; ENSMUSG00000020264, Slc36a2, solute carrier family 36 (proton/amino acid symporter), member 2, [RH, Score=256, Expect=8e-76]} {Dmel: FBgn0032036, CG13384, [RH, Score=287, Expect=2e-87]} {Celegans: WBGene00012804, Y43F4B.7, [Score=203, Expect=4e-57]} {Smed: dd_Smed_v6_2596_0_1, dd_Smed_v6_2596_0_1, [RH, Score=174, Expect=5e-49]} {RNA1509_7502} {RNA1310_14780.1} {RNA815_6885}
3.	MligTC455_46732	1475	30.74	Mlig455_016558	Neo: - Age: -	ARFGAP1	0.96	-	-	-	-	-	0.960	Mlig455_016558 {REF} {Length: 3115} {TRANSSPLICED} {Human: ENSG00000101199, ARFGAP1, ADP ribosylation factor GTPase activating protein 1, [Score=149, Expect=4e-40]} {Mouse: ENSMUSG00000027575, Arfgap1, ADP-ribosylation factor GTPase activating protein 1, [Score=145, Expect=7e-39]} {Dmel: FBgn0020655, ArfGAP1, ADP-ribosylation factor GTPase activating protein 1, [Score=192, Expect=5e-56]} {Celegans: WBGene00010500, K02B12.7, [Score=124, Expect=3e-31]} {RNA1509_3768} {RNA1310_4307.1} {RNA815_7335}
4.	MligTC455_27258	442	9.2	Mlig455_056156	Neo: - Age: -	TBCCD1	0.958	-	-	-	-	-	0.958	Mlig455_056156 {REF} {Length: 4380} {TRANSSPLICED} {Pfam: Tubulin binding cofactor C [PF07986.14, score=81.3]} {Human: ENSG00000113838, TBCCD1, TBCC domain containing 1, [RH, Score=241, Expect=4e-71]} {Mouse: ENSMUSG00000004462, Tbccd1, TBCC domain containing 1, [RH, Score=242, Expect=1e-71]} {Smed: dd_Smed_v6_12514_0_1, dd_Smed_v6_12514_0_1, [RH, Score=322, Expect=8e-102]} {RNA1509_44730} {RNA1310_4807.1, RNA1509_44730} {RNA1509_44730, RNA815_3591}