Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_26047 | 280 | 5.83 | Mlig455_061668 | Neo: - Age: - |
Mlig455_061668 {REF} {Length: 1740} {NoTransDecoderORF} {RNA1509_47332} {RNA1310_41891, RNA1509_47332} {RNA1509_47332, RNA815_20265.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -6.72 | 3.039 | 0.06161 | 0.56735 | |
RegionR2 | 1.596 | 3.039 | 0.04027 | 0.23305 | |
RegionR3 | 0.451 | 3.039 | 0.61347 | 1.00000 | |
RegionR4 | 1.58 | 3.039 | 0.04092 | 0.16820 | |
RegionR5 | 1.568 | 3.039 | 0.01522 | 0.07916 | |
RegionR6 | 1.366 | 3.039 | 0.06616 | 0.48120 | |
RegionR7 | 1.645 | 3.039 | 0.04117 | 0.38865 | |
RegionR8 | -1.487 | 3.039 | 0.99626 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -0.261 | 3.039 | 0.99998 | 1.00000 | |
RegenerationR2 | -1.254 | 3.039 | 0.00182 | 0.06597 | |
RegenerationR3 | -0.067 | 3.039 | 0.89660 | 1.00000 | |
RegenerationR4 | -0.942 | 3.039 | 0.06074 | 0.39502 | |
RegenerationR5 | -0.795 | 3.039 | 0.06366 | 0.39917 | |
RegenerationR6 | -0.379 | 3.039 | 0.43972 | 0.76371 | |
RegenerationBL | -0.369 | 3.039 | 0.65719 | 0.99242 | |
RegenerationTP | 0.939 | 3.039 | 0.24669 | 0.69394 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_26047 | 280 | 5.83 | Mlig455_061668 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_061668 {REF} {Length: 1740} {NoTransDecoderORF} {RNA1509_47332} {RNA1310_41891, RNA1509_47332} {RNA1509_47332, RNA815_20265.1} | |
2. | MligTC455_36009 | 420 | 8.74 | Mlig455_055465 | Neo: - Age: - |
EPB41L3 | 1.727 | 0.962 | - | - | - | - | 0.765 | Mlig455_055465 {REF} {Length: 6945} {TRANSSPLICED} {Pfam: FERM C-terminal PH-like domain [PF09380.12, score=64.5]; FERM central domain [PF00373.20, score=30.9]} {Human: ENSG00000082397, EPB41L3, erythrocyte membrane protein band 4.1 like 3, [Score=182, Expect=8e-50]; ENSG00000088367, EPB41L1, erythrocyte membrane protein band 4.1 like 1, [Score=175, Expect=6e-48]} {Mouse: ENSMUSG00000024044, Epb41l3, erythrocyte membrane protein band 4.1 like 3, [Score=182, Expect=3e-50]; ENSMUSG00000027624, Epb41l1, erythrocyte membrane protein band 4.1 like 1, [Score=176, Expect=4e-48]; ENSMUSG00000019978, Epb41l2, erythrocyte membrane protein band 4.1 like 2, [Score=173, Expect=9e-47]} {Dmel: FBgn0010434, cora, coracle, [Score=171, Expect=1e-46]} {Celegans: WBGene00001490, frm-3, FERM domain (Protein4.1-ezrin-radixin-moesin) family, [Score=109, Expect=2e-25]} {Smed: dd_Smed_v6_1613_0_1, dd_Smed_v6_1613_0_1, [Score=157, Expect=2e-41]} {RNA1509_6972} {RNA1310_8636} {RNA815_8378} |
3. | MligTC455_50441 | 689 | 14.36 | Mlig455_027630 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.495 Regeneration-downregulated R2: -1.945 Regeneration-depleted R2: -1.945 |
HPCA | 1.663 | - | - | - | - | 0.950 | 0.713 | Mlig455_027630 {REF} {Length: 1890} {Pfam: EF-hand domain pair [PF13499.8, score=90.3]; EF hand [PF00036.34, score=84.1]; EF-hand domain [PF13405.8, score=70.3]; EF hand [PF13202.8, score=62.0]; EF-hand domain pair [PF13833.8, score=39.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=38.6]} {Human: ENSG00000121905, HPCA, hippocalcin, [Score=45.4, Expect=4e-06]} {Mouse: ENSMUSG00000028785, Hpca, hippocalcin, [Score=45.4, Expect=3e-06]; ENSMUSG00000071379, Hpcal1, hippocalcin-like 1, [Score=43.9, Expect=1e-05]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=64.3, Expect=1e-13]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=63.9, Expect=1e-13]} {Smed: dd_Smed_v6_5204_0_1, dd_Smed_v6_5204_0_1, [Score=107, Expect=8e-31]} {RNA1509_16089, RNA1509_22187, RNA1509_52154, RNA1509_53386} {RNA1310_32234, RNA1509_16089, RNA1509_22187, RNA1509_52154, RNA1509_53386} {RNA1509_16089, RNA1509_22187, RNA1509_52154, RNA1509_53386, RNA815_22377.1} |
4. | MligTC455_48921 | 282 | 5.87 | Mlig455_029707 | Neo: Int S/G2/M Age: - |
0.975 | - | - | - | - | 0.975 | - | Mlig455_029707 {REF} {Length: 292} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_50538.2} {RNA815_19005.1} | |
5. | MligTC455_50135 | 745 | 15.51 | Mlig455_009180, Mlig455_009608 | Neo: - Age: logFC(26M/2M)=-0.712 Region-enriched R4: 2.262/0.00372 Regeneration-downregulated BL: -3.226 Regeneration-depleted BL: -3.226 |
0.974 | - | - | - | - | 0.974 | - | Mlig455_009180 {REF} {Length: 2128} {RNA1310_31163} {RNA815_15301.1} Mlig455_009608 {REF} {Length: 7395} {RNA1509_11387} {RNA1310_25721} {RNA815_15301.1} |
|
6. | MligTC455_42296 | 21 | 0.44 | Mlig455_053339 | Neo: - Age: - |
PIP5K1A | 0.973 | - | - | - | - | 0.973 | - | Mlig455_053339 {REF} {Length: 2073} {TRANSSPLICED} {Pfam: Phosphatidylinositol-4-phosphate 5-Kinase [PF01504.20, score=268.3]} {Human: ENSG00000143398, PIP5K1A, phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, [RH, Score=417, Expect=9e-140]} {Mouse: ENSMUSG00000034902, Pip5k1c, phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma, [RH, Score=409, Expect=5e-136]} {Dmel: FBgn0016984, sktl, skittles, [Score=435, Expect=2e-144]} {Celegans: WBGene00004087, ppk-1, PIP Kinase, [Score=409, Expect=1e-136]} {Smed: dd_Smed_v6_7632_0_3, dd_Smed_v6_7632_0_3, [Score=414, Expect=8e-140]} {RNA1509_26123} {RNA1310_25286.1} {RNA815_4999.1} |
7. | MligTC455_47334 | 21 | 0.43 | Mlig455_025941 | Neo: - Age: - |
DSTYK | 0.971 | - | - | - | - | 0.971 | - | Mlig455_025941 {REF} {Length: 2677} {Pfam: Dynamin family [PF00350.25, score=63.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=59.5]; Protein kinase domain [PF00069.27, score=53.5]; 50S ribosome-binding GTPase [PF01926.25, score=26.8]} {Human: ENSG00000133059, DSTYK, dual serine/threonine and tyrosine protein kinase, [Score=99.8, Expect=8e-21]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=102, Expect=5e-22]} {Dmel: FBgn0000826, png, pan gu, [Score=58.5, Expect=7e-09]} {Celegans: WBGene00002193, kin-5, Tyrosine-protein kinase, [Score=59.7, Expect=6e-09]} {Smed: dd_Smed_v6_1371_0_1, dd_Smed_v6_1371_0_1, [Score=160, Expect=2e-40]} {RNA1509_27256} {RNA1310_2101.1} {RNA815_1104.2} |
8. | MligTC455_52981 | 216 | 4.5 | Mlig455_040266, Mlig455_040275 | Neo: - Age: - |
IPMK | 0.969 | - | - | - | - | 0.969 | - | Mlig455_040266 {REF} {Length: 2596} {Pfam: Inositol polyphosphate kinase [PF03770.18, score=138.2]} {Human: ENSG00000151151, IPMK, inositol polyphosphate multikinase, [RH, Score=127, Expect=3e-32]} {Mouse: ENSMUSG00000060733, Ipmk, inositol polyphosphate multikinase, [Score=120, Expect=7e-30]} {Dmel: FBgn0031267, Ipk2, [Score=105, Expect=4e-25]} {Celegans: WBGene00009262, F30A10.3, Kinase, [RH, Score=66.2, Expect=9e-12]} {Smed: dd_Smed_v6_3701_0_1, dd_Smed_v6_3701_0_1, [Score=129, Expect=2e-34]} {RNA1509_12297} {RNA1310_12275} {RNA815_4311} Mlig455_040275 {REF} {Length: 2517} {Pfam: Inositol polyphosphate kinase [PF03770.18, score=138.7]} {Human: ENSG00000151151, IPMK, inositol polyphosphate multikinase, [Score=119, Expect=1e-29]} {Mouse: ENSMUSG00000060733, Ipmk, inositol polyphosphate multikinase, [Score=119, Expect=3e-30]} {Dmel: FBgn0031267, Ipk2, [Score=99.8, Expect=1e-23]} {Celegans: WBGene00009262, F30A10.3, Kinase, [RH, Score=65.1, Expect=1e-11]} {Smed: dd_Smed_v6_3701_0_1, dd_Smed_v6_3701_0_1, [Score=117, Expect=1e-30]} {RNA1509_12297, RNA1509_57864} {RNA1310_13642, RNA1509_57864} {RNA1509_57864, RNA815_4311} |
9. | MligTC455_29449 | 88 | 1.84 | Mlig455_055134 | Neo: - Age: Up-Down-Down Region-enriched R4: 2.118/0.04706 |
0.968 | - | - | - | - | 0.968 | - | Mlig455_055134 {REF} {Length: 3438} {Smed: dd_Smed_v6_15433_0_1, dd_Smed_v6_15433_0_1, [Score=42.7, Expect=8e-06]} {RNA1509_50401} {RNA1310_13609} {RNA815_5685.1} | |
10. | MligTC455_00517 | 14 | 0.3 | Mlig455_030063 | Neo: - Age: - Regeneration-enriched R4: 7.437 |
0.965 | - | - | - | - | 0.965 | - | Mlig455_030063 {REF} {Length: 1513} {RNA1509_5594} {RNA1310_99804} {RNA815_59053.1} | |
11. | MligTC455_21036 | 7843 | 163.39 | Mlig455_057458 | Neo: Int S/G2/M Age: - |
0.962 | - | - | - | - | 0.962 | - | Mlig455_057458 {REF} {Length: 320} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_712} {RNA1310_95473} {RNA815_49240} | |
12. | MligTC455_36008 | 404 | 8.41 | Mlig455_055395 | Neo: - Age: logFC(26M/2M)=0.738 |
0.962 | 0.962 | - | - | - | - | - | Mlig455_055395 {REF} {Length: 2036} {RNA1509_14528} {RNA1310_31437} {RNA815_14226} | |
13. | MligTC455_07051 | 26 | 0.54 | Mlig455_024162, Mlig455_047642 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_024162 {REF} {Length: 2495} {Pfam: SET domain [PF00856.30, score=35.1]; C2H2-type zinc-finger domain [PF13909.8, score=22.1]} {RNA1310_131883} {RNA815_45891} Mlig455_047642 {REF} {Length: 799} {RNA1310_131883} |
|
14. | MligTC455_28247 | 129 | 2.69 | Mlig455_066444 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_066444 {REF} {Length: 1369} {NoTransDecoderORF} {RNA1509_28645} {RNA1310_1112.1} {RNA815_8074.2} | |
15. | MligTC455_17926 | 112 | 2.34 | Mlig455_032402 | Neo: - Age: - |
0.957 | 0.957 | - | - | - | - | - | Mlig455_032402 {REF} {Length: 1743} {RNA1509_37387} {RNA1310_26813.2} {RNA815_23526} | |
16. | MligTC455_30074 | 224 | 4.67 | Mlig455_010726 | Neo: Int S/G2/M Age: - |
MCM6 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_010726 {REF} {Length: 5430} {Pfam: MCM P-loop domain [PF00493.25, score=325.2]; MCM OB domain [PF17207.5, score=124.3]; MCM6 C-terminal winged-helix domain [PF18263.3, score=96.2]; MCM AAA-lid domain [PF17855.3, score=87.7]; MCM N-terminal domain [PF14551.8, score=60.7]; Magnesium chelatase, subunit ChlI [PF01078.23, score=31.9]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=25.0]; AAA domain (dynein-related subfamily) [PF07728.16, score=20.5]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.4]; Sigma-54 interaction domain [PF00158.28, score=18.9]} {Human: ENSG00000076003, MCM6, minichromosome maintenance complex component 6, [RH, Score=879, Expect=0.0]} {Mouse: ENSMUSG00000026355, Mcm6, minichromosome maintenance complex component 6, [RH, Score=868, Expect=0.0]} {Dmel: FBgn0025815, Mcm6, Minichromosome maintenance 6, [RH, Score=852, Expect=0.0]} {Celegans: WBGene00003158, mcm-6, DNA replication licensing factor mcm-6, [RH, Score=747, Expect=0.0]} {Smed: dd_Smed_v6_2682_0_1, dd_Smed_v6_2682_0_1, [RH, Score=769, Expect=0.0]} {RNA1509_4924} {RNA1310_1781.1} {RNA815_909} |
17. | MligTC455_26433 | 15 | 0.31 | Mlig455_013559 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_013559 {REF} {Length: 1067} {NoTransDecoderORF} {RNA1509_38155} {RNA1310_16376} {RNA815_12881} | |
18. | MligTC455_31216 | 103 | 2.15 | Mlig455_007970, Mlig455_033836 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_007970 {REF} {Length: 4393} {RNA1509_47848} {RNA1310_23510} {RNA815_21831} Mlig455_033836 {REF} {Length: 7022} {RNA1509_51255} {RNA1310_40336.1} {RNA815_39433} |
|
19. | MligTC455_53154 | 84 | 1.74 | Mlig455_043500 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_043500 {REF} {Length: 1914} {RNA1509_42280} {RNA1310_99128} {RNA815_61343} | |
20. | MligTC455_39181 | 265 | 5.52 | Mlig455_061266 | Neo: Int S/G2/M Age: - Region-specific R4: 3.386 |
NCAPH | 0.953 | - | - | - | - | 0.953 | - | Mlig455_061266 {REF} {Length: 4275} {Pfam: Condensin complex subunit 2 [PF05786.16, score=260.1]} {Human: ENSG00000121152, NCAPH, non-SMC condensin I complex subunit H, [Score=129, Expect=5e-30]} {Mouse: ENSMUSG00000034906, Ncaph, non-SMC condensin I complex, subunit H, [Score=129, Expect=2e-30]} {Dmel: FBgn0014127, barr, barren, [RH, Score=70.1, Expect=5e-12]} {Smed: dd_Smed_v6_8491_0_3, dd_Smed_v6_8491_0_3, [RH, Score=159, Expect=4e-40]} {RNA1509_7623} {RNA1310_2562.1} {RNA815_8919} |
21. | MligTC455_23080 | 199 | 4.15 | Mlig455_011733 | Neo: - Age: logFC(26M/2M)=-0.537 |
CUBN | 0.952 | 0.952 | - | - | - | - | - | Mlig455_011733 {REF} {Length: 1824} {Pfam: EGF-like domain [PF00008.29, score=38.3]; Human growth factor-like EGF [PF12661.9, score=21.2]} {Human: ENSG00000107611, CUBN, cubilin, [Score=60.8, Expect=3e-10]} {Mouse: ENSMUSG00000049252, Lrp1b, low density lipoprotein-related protein 1B (deleted in tumors), [Score=52.8, Expect=8e-08]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=51.6, Expect=2e-07]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=51.2, Expect=3e-07]} {Dmel: FBgn0259140, CG42255, [Score=46.2, Expect=1e-05]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=54.3, Expect=2e-08]} {RNA1509_38266} {RNA1310_19274} {RNA815_9585.2} |
22. | MligTC455_39182 | 567 | 11.81 | Mlig455_061295, Mlig455_062653 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 2.232/0.01716 |
NCAPH | 0.952 | - | - | - | - | 0.952 | - | Mlig455_061295 {REF} {Length: 3956} {Pfam: Condensin complex subunit 2 [PF05786.16, score=263.4]} {Human: ENSG00000121152, NCAPH, non-SMC condensin I complex subunit H, [Score=129, Expect=3e-30]} {Mouse: ENSMUSG00000034906, Ncaph, non-SMC condensin I complex, subunit H, [Score=132, Expect=2e-31]} {Dmel: FBgn0014127, barr, barren, [RH, Score=70.1, Expect=6e-12]} {Smed: dd_Smed_v6_8491_0_3, dd_Smed_v6_8491_0_3, [Score=158, Expect=6e-40]} {RNA1509_7623} {RNA1310_2562.1} {RNA815_8919} Mlig455_062653 {REF} {Length: 3594} {Pfam: Condensin complex subunit 2 [PF05786.16, score=262.5]} {Human: ENSG00000121152, NCAPH, non-SMC condensin I complex subunit H, [Score=129, Expect=5e-30]} {Mouse: ENSMUSG00000034906, Ncaph, non-SMC condensin I complex, subunit H, [Score=131, Expect=3e-31]} {Dmel: FBgn0014127, barr, barren, [RH, Score=70.1, Expect=6e-12]} {Smed: dd_Smed_v6_8491_0_3, dd_Smed_v6_8491_0_3, [RH, Score=160, Expect=1e-40]} {RNA1509_7623} {RNA1310_3381, RNA1509_7623} {RNA1509_7623, RNA815_8919} |
23. | MligTC455_17771 | 78 | 1.62 | Mlig455_001663 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_001663 {REF} {Length: 1828} {NoTransDecoderORF} {RNA1310_81916} | |
24. | MligTC455_18687 | 156 | 3.25 | Mlig455_061195 | Neo: - Age: Down-Down-Up Region-enriched R5: 2.659/0.04682 |
C9orf78 | 0.95 | 0.950 | - | - | - | - | - | Mlig455_061195 {REF} {Length: 1320} {TRANSSPLICED} {Pfam: Hepatocellular carcinoma-associated antigen 59 [PF07052.13, score=75.1]} {Human: ENSG00000136819, C9orf78, chromosome 9 open reading frame 78, [RH, Score=80.1, Expect=1e-16]} {Mouse: ENSMUSG00000026851, BC005624, cDNA sequence BC005624, [RH, Score=82.8, Expect=8e-18]} {Dmel: FBgn0035254, CG7974, [RH, Score=90.1, Expect=1e-20]} {Smed: dd_Smed_v6_8171_0_1, dd_Smed_v6_8171_0_1, [RH, Score=89.0, Expect=1e-20]} {RNA1509_42392} {RNA1310_25572} {RNA815_11025} |
25. | MligTC455_50425 | 1754 | 36.55 | Mlig455_021985, Mlig455_031763, Mlig455_051833, Mlig455_063612 | Neo: - Age: Down-Up-Down |
0.95 | - | - | - | - | 0.950 | - | Mlig455_021985 {REF} {Length: 394} {TRANSSPLICED} {RNA1509_59895} {RNA1310_900.2} {RNA815_1698.1} Mlig455_031763 {REF} {Length: 391} {TRANSSPLICED} {RNA1509_59895} {RNA1310_900.2} {RNA815_1698.1} Mlig455_051833 {REF} {Length: 498} {TRANSSPLICED} {RNA1509_43937} {RNA1310_900.2} {RNA815_1698.1} Mlig455_063612 {REF} {Length: 710} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43937} {RNA1310_145253} {RNA815_1698.1} |
|
26. | MligTC455_54124 | 453 | 9.43 | Mlig455_057229 | Neo: - Age: - Region-enriched R6: 2.179/0.02167 |
LAMA2 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_057229 {REF} {Length: 1958} {Pfam: Tropomyosin [PF00261.22, score=76.4]; Tropomyosin like [PF12718.9, score=27.4]; Crescentin protein [PF19220.2, score=20.8]} {Human: ENSG00000196569, LAMA2, laminin subunit alpha 2, [Score=48.9, Expect=5e-06]} {Celegans: WBGene00002978, lev-11, Tropomyosin isoforms a/b/d/f, [Score=50.8, Expect=2e-07]} {Smed: dd_Smed_v6_1790_0_1, dd_Smed_v6_1790_0_1, [Score=55.5, Expect=4e-09]} {RNA1509_20736} {RNA1310_27668, RNA1509_20736} {RNA1509_20736, RNA815_13494} |