Data search
Results for MligTC455_50459
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50459 | 483 | 10.05 | Mlig455_023585, Mlig455_067004 | Neo: Neoblast, stringent Age: - Region-enriched R4: 2.547/0.00928 |
Mlig455_023585 {REF} {Length: 2596} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=38.4]} {RNA1509_32778} {RNA1310_38674} {RNA815_25642} Mlig455_067004 {REF} {Length: 2455} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=38.4]} {RNA1509_32778} {RNA1310_38674, RNA1509_32778} {RNA1509_32778, RNA815_25642} |
Cumulative graph for MligTC455_50459
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.483 | 3.769 | 0.20643 | 0.84582 | |
| RegionR2 | -0.697 | 3.769 | 0.97227 | 1.00000 | |
| RegionR3 | 0.908 | 3.769 | 0.27383 | 0.81798 | |
| RegionR4 | 2.547 | 3.769 | 0.00086 | 0.00928 | |
| RegionR5 | 2.077 | 3.769 | 0.00040 | 0.00499 | |
| RegionR6 | 0.649 | 3.769 | 0.47112 | 1.00000 | |
| RegionR7 | -0.541 | 3.769 | 0.95971 | 1.00000 | |
| RegionR8 | 0.541 | 3.769 | 0.60877 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.12 | 3.769 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.636 | 3.769 | 0.22842 | 0.67620 | |
| RegenerationR3 | 0.306 | 3.769 | 0.58344 | 0.90019 | |
| RegenerationR4 | -0.2 | 3.769 | 0.71743 | 0.96035 | |
| RegenerationR5 | 0.845 | 3.769 | 0.07560 | 0.43009 | |
| RegenerationR6 | 1.393 | 3.769 | 0.01020 | 0.12476 | |
| RegenerationBL | 1.048 | 3.769 | 0.11700 | 0.40504 | |
| RegenerationTP | 0.193 | 3.769 | 0.80746 | 1.00000 |
Genes with expression patterns similar to MligTC455_50459
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50459 | 483 | 10.05 | Mlig455_023585, Mlig455_067004 | Neo: Neoblast, stringent Age: - Region-enriched R4: 2.547/0.00928 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_023585 {REF} {Length: 2596} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=38.4]} {RNA1509_32778} {RNA1310_38674} {RNA815_25642} Mlig455_067004 {REF} {Length: 2455} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=38.4]} {RNA1509_32778} {RNA1310_38674, RNA1509_32778} {RNA1509_32778, RNA815_25642} |
|
| 2. | MligTC455_13659 | 277 | 5.77 | Mlig455_060046, Mlig455_063498 | Neo: Irradiation Age: Up-Up-Up, logFC(26M/2M)=0.925 Region-enriched R5: 4.130/0.00000 |
3.262 | - | 0.708 | 0.779 | 0.951 | 0.824 | - | Mlig455_060046 {REF} {Length: 4212} {RNA1509_57337} {RNA1310_9265, RNA1509_57337} {RNA1509_57337, RNA815_13115} Mlig455_063498 {REF} {Length: 1365} {NoTransDecoderORF} {RNA1509_57337} {RNA1310_54209} {RNA815_29261} |
|
| 3. | MligTC455_29056 | 214 | 4.46 | Mlig455_005934 | Neo: Int S/G2/M Age: Up-Up-Down |
2.525 | - | - | - | 0.950 | 0.717 | 0.858 | Mlig455_005934 {REF} {Length: 3571} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=54.7, Expect=7e-07]} {RNA1509_15781} {RNA1310_3922, RNA1509_15781} {RNA1509_15781, RNA815_5825} | |
| 4. | MligTC455_48565 | 369 | 7.69 | Mlig455_050968 | Neo: - Age: - Region-specific R5: 2.171 Region-enriched R5: 1.645/0.00001 |
1.789 | - | - | - | 0.959 | - | 0.830 | Mlig455_050968 {REF} {Length: 472} {NoTransDecoderORF} {RNA1509_25992} {RNA1310_89415.2, RNA1509_25992} {RNA1509_25992, RNA815_55479} | |
| 5. | MligTC455_43441 | 981 | 20.44 | Mlig455_030636, Mlig455_031007 | Neo: Int S/G2/M Age: - |
1.766 | - | - | 0.816 | - | 0.950 | - | Mlig455_030636 {REF} {Length: 1690} {TRANSSPLICED} {RNA1509_19913, RNA1509_42652, RNA1509_43735} {RNA1310_18465, RNA1509_19913, RNA1509_42652, RNA1509_43735} {RNA1509_19913, RNA1509_42652, RNA1509_43735, RNA815_7582} Mlig455_031007 {REF} {Length: 1871} {TRANSSPLICED} {RNA1509_42652} {RNA1310_18465} {RNA815_7582} |
|
| 6. | MligTC455_44969 | 509 | 10.6 | Mlig455_031392 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 1.230/0.00400 |
ANKRA2 | 1.71 | - | - | - | 0.957 | - | 0.753 | Mlig455_031392 {REF} {Length: 1777} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=71.0]; Ankyrin repeat [PF00023.32, score=58.0]; Ankyrin repeat [PF13606.8, score=54.8]; Ankyrin repeats (many copies) [PF13637.8, score=53.6]; Ankyrin repeats (many copies) [PF13857.8, score=52.6]} {Human: ENSG00000164331, ANKRA2, ankyrin repeat family A member 2, [RH, Score=136, Expect=2e-37]} {Mouse: ENSMUSG00000021661, Ankra2, ankyrin repeat, family A (RFXANK-like), 2, [RH, Score=135, Expect=3e-37]} {Dmel: FBgn0032171, CG5846, [RH, Score=115, Expect=1e-30]} {Celegans: WBGene00006490, kdin-1, KiDINs220 (Vertebrate scaffold protein) homolog, [Score=66.2, Expect=5e-12]} {Smed: dd_Smed_v6_14192_0_1, dd_Smed_v6_14192_0_1, [RH, Score=201, Expect=2e-64]} {RNA1509_16976, RNA1509_32143, RNA1509_38659} {RNA1310_4131.2, RNA1509_16976, RNA1509_32143, RNA1509_38659} {RNA1509_16976, RNA1509_32143, RNA1509_38659, RNA815_7800} |
| 7. | MligTC455_35845 | 530 | 11.05 | Mlig455_063785 | Neo: - Age: - Region-enriched R5: 1.375/0.00006 |
1.7 | - | - | - | 0.748 | - | 0.952 | Mlig455_063785 {REF} {Length: 4759} {TRANSSPLICED} {RNA1509_4401, RNA1509_46808, RNA1509_51880} {RNA1310_6922, RNA1509_46808, RNA1509_51880} {RNA1509_46808, RNA1509_51880, RNA815_12752} | |
| 8. | MligTC455_50646 | 258 | 5.37 | Mlig455_069118 | Neo: - Age: - |
SCYL1 | 0.969 | - | - | - | 0.969 | - | - | Mlig455_069118 {REF} {Length: 3667} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=41.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.1]; HEAT repeats [PF13646.8, score=32.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=27.4]; Protein kinase domain [PF00069.27, score=25.0]} {Human: ENSG00000142186, SCYL1, SCY1 like pseudokinase 1, [RH, Score=446, Expect=1e-144]} {Mouse: ENSMUSG00000024941, Scyl1, SCY1-like 1 (S. cerevisiae), [RH, Score=445, Expect=3e-144]} {Dmel: FBgn0260990, yata, [RH, Score=518, Expect=6e-172]} {Celegans: WBGene00012337, W07G4.3, [RH, Score=409, Expect=9e-131]} {Smed: dd_Smed_v6_3470_0_1, dd_Smed_v6_3470_0_1, [RH, Score=461, Expect=2e-152]} {RNA1509_23084} {RNA1310_4140} {RNA815_4060} |
| 9. | MligTC455_19733 | 1211 | 25.23 | Mlig455_011529, Mlig455_011605, Mlig455_050015 | Neo: - Age: - |
SRP14 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_011529 {REF} {Length: 2498} {Pfam: Signal recognition particle 14kD protein [PF02290.17, score=80.9]} {Human: ENSG00000140319, SRP14, signal recognition particle 14, [RH, Score=99.4, Expect=4e-27]} {Mouse: ENSMUSG00000009549, Srp14, signal recognition particle 14, [RH, Score=92.0, Expect=7e-25]} {Dmel: FBgn0038808, Srp14, Signal recognition particle protein 14, [RH, Score=60.8, Expect=9e-13]} {Celegans: WBGene00017799, F25G6.8, Signal recognition particle 14 kDa protein, [RH, Score=65.5, Expect=1e-14]} {Smed: dd_Smed_v6_3653_0_1, dd_Smed_v6_3653_0_1, [RH, Score=112, Expect=4e-33]} {RNA1509_12830} {RNA1310_47278.1} {RNA815_25613} Mlig455_011605 {REF} {Length: 2466} {Pfam: Signal recognition particle 14kD protein [PF02290.17, score=80.9]} {Human: ENSG00000140319, SRP14, signal recognition particle 14, [RH, Score=99.4, Expect=4e-27]} {Mouse: ENSMUSG00000009549, Srp14, signal recognition particle 14, [RH, Score=92.0, Expect=7e-25]} {Dmel: FBgn0038808, Srp14, Signal recognition particle protein 14, [RH, Score=60.8, Expect=9e-13]} {Celegans: WBGene00017799, F25G6.8, Signal recognition particle 14 kDa protein, [RH, Score=65.5, Expect=1e-14]} {Smed: dd_Smed_v6_3653_0_1, dd_Smed_v6_3653_0_1, [RH, Score=112, Expect=4e-33]} {RNA1509_12830, RNA1509_35783, RNA1509_37152, RNA1509_44435} {RNA1310_47278.1, RNA1509_12830, RNA1509_35783, RNA1509_37152, RNA1509_44435} {RNA1509_12830, RNA1509_35783, RNA1509_37152, RNA1509_44435, RNA815_25613} Mlig455_050015 {REF} {Length: 2672} {TRANSSPLICED} {Pfam: Signal recognition particle 14kD protein [PF02290.17, score=80.9]} {Human: ENSG00000140319, SRP14, signal recognition particle 14, [RH, Score=99.4, Expect=4e-27]} {Mouse: ENSMUSG00000009549, Srp14, signal recognition particle 14, [RH, Score=92.0, Expect=7e-25]} {Dmel: FBgn0038808, Srp14, Signal recognition particle protein 14, [RH, Score=60.8, Expect=9e-13]} {Celegans: WBGene00017799, F25G6.8, Signal recognition particle 14 kDa protein, [RH, Score=65.5, Expect=1e-14]} {Smed: dd_Smed_v6_3653_0_1, dd_Smed_v6_3653_0_1, [RH, Score=112, Expect=4e-33]} {RNA1509_12830} {RNA1310_51627} {RNA815_25613} |
| 10. | MligTC455_35766 | 2077 | 43.28 | Mlig455_036201 | Neo: - Age: logFC(26M/2M)=0.606 Regeneration-enriched R6: 1.830 |
HNRNPL | 0.96 | - | - | - | 0.960 | - | - | Mlig455_036201 {REF} {Length: 3072} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=117.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.5]; Occluded RNA-recognition motif [PF16842.7, score=33.5]; RRM-like domain [PF11835.10, score=32.1]} {Human: ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=223, Expect=2e-64]; ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=223, Expect=2e-64]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=224, Expect=8e-65]} {Dmel: FBgn0003435, sm, smooth, [Score=224, Expect=3e-66]} {Celegans: WBGene00016624, C44B7.2, [Score=192, Expect=2e-53]} {Smed: dd_Smed_v6_7465_0_1, dd_Smed_v6_7465_0_1, [Score=233, Expect=5e-68]} {RNA1509_2750} {RNA1310_3778.1, RNA1509_2750} {RNA1509_2750, RNA815_9958} |
| 11. | MligTC455_17533 | 156 | 3.25 | Mlig455_018291 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_018291 {REF} {Length: 1866} {TRANSSPLICED} {RNA1509_48476} {RNA1310_24654.1} {RNA815_19410} | |
| 12. | MligTC455_35765 | 2122 | 44.2 | Mlig455_005545 | Neo: - Age: - Regeneration-enriched R6: 1.822 |
HNRNPL | 0.958 | - | - | - | 0.958 | - | - | Mlig455_005545 {REF} {Length: 3613} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=118.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=85.2]; Occluded RNA-recognition motif [PF16842.7, score=34.2]; RRM-like domain [PF11835.10, score=32.1]} {Human: ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=225, Expect=4e-65]; ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=225, Expect=4e-65]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=225, Expect=2e-65]} {Dmel: FBgn0003435, sm, smooth, [Score=225, Expect=2e-66]} {Celegans: WBGene00016624, C44B7.2, [Score=189, Expect=2e-52]} {Smed: dd_Smed_v6_7465_0_1, dd_Smed_v6_7465_0_1, [Score=234, Expect=2e-68]} {RNA1509_24811, RNA1509_8468} {RNA1310_3778.1, RNA1509_24811, RNA1509_8468} {RNA1509_24811, RNA1509_8468, RNA815_9958} |
| 13. | MligTC455_52270 | 496 | 10.34 | Mlig455_042014 | Neo: - Age: - |
LONP1 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_042014 {REF} {Length: 4054} {TRANSSPLICED} {Pfam: Lon protease (S16) C-terminal proteolytic domain [PF05362.15, score=219.0]; ATP-dependent protease La (LON) substrate-binding domain [PF02190.18, score=96.2]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=85.0]; Subunit ChlI of Mg-chelatase [PF13541.8, score=40.2]; AAA domain (dynein-related subfamily) [PF07728.16, score=36.3]; AAA domain (Cdc48 subfamily) [PF07724.16, score=32.4]; AAA ATPase domain [PF13191.8, score=28.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=26.3]; AAA domain [PF13401.8, score=23.5]; PrkA AAA domain [PF08298.13, score=22.9]; AAA domain [PF13173.8, score=20.9]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=19.2]} {Human: ENSG00000196365, LONP1, lon peptidase 1, mitochondrial, [RH, Score=1087, Expect=0.0]} {Mouse: ENSMUSG00000041168, Lonp1, lon peptidase 1, mitochondrial, [RH, Score=1100, Expect=0.0]} {Dmel: FBgn0036892, Lon, Lon protease, [RH, Score=1037, Expect=0.0]} {Celegans: WBGene00016391, lonp-1, Lon protease homolog, mitochondrial, [RH, Score=890, Expect=0.0]} {Smed: dd_Smed_v6_3971_0_1, dd_Smed_v6_3971_0_1, [RH, Score=1079, Expect=0.0]} {RNA1509_14560, RNA1509_51563} {RNA1310_4395, RNA1509_51563} {RNA1509_51563, RNA815_653} |
| 14. | MligTC455_39981 | 457 | 9.52 | Mlig455_028079 | Neo: Int S/G2/M Age: - |
MRPL17 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_028079 {REF} {Length: 1342} {TRANSSPLICED} {Pfam: Ribosomal protein L17 [PF01196.21, score=29.7]} {Human: ENSG00000158042, MRPL17, mitochondrial ribosomal protein L17, [RH, Score=57.4, Expect=3e-10]} {Mouse: ENSMUSG00000030879, Mrpl17, mitochondrial ribosomal protein L17, [RH, Score=57.8, Expect=2e-10]} {Dmel: FBgn0035122, mRpL17, mitochondrial ribosomal protein L17, [RH, Score=67.0, Expect=4e-14]} {Smed: dd_Smed_v6_3289_0_1, dd_Smed_v6_3289_0_1, [RH, Score=105, Expect=1e-28]} {RNA1509_21955, RNA1509_25190} {RNA1310_25456, RNA1509_21955, RNA1509_25190} {RNA1509_21955, RNA1509_25190, RNA815_9956} |
| 15. | MligTC455_24531 | 531 | 11.06 | Mlig455_043484 | Neo: Irradiation Age: - |
DNAJB14 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_043484 {REF} {Length: 2791} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=83.3]} {Human: ENSG00000164031, DNAJB14, DnaJ heat shock protein family (Hsp40) member B14, [Score=83.6, Expect=4e-18]; ENSG00000170464, DNAJC18, DnaJ heat shock protein family (Hsp40) member C18, [Score=82.8, Expect=7e-18]} {Mouse: ENSMUSG00000074212, Dnajb14, DnaJ heat shock protein family (Hsp40) member B14, [Score=84.3, Expect=3e-20]; ENSMUSG00000020109, Dnajb12, DnaJ heat shock protein family (Hsp40) member B12, [Score=82.4, Expect=9e-18]} {Dmel: FBgn0034091, mrj, [Score=77.8, Expect=2e-16]} {Celegans: WBGene00001019, dnj-1, DnaJ homolog subfamily B member 1, [Score=71.6, Expect=3e-14]} {Smed: dd_Smed_v6_11169_0_1, dd_Smed_v6_11169_0_1, [Score=72.8, Expect=2e-15]} {RNA1509_21677, RNA1509_33477, RNA1509_49809, RNA1509_53673, RNA1509_57405} {RNA1310_28140, RNA1509_21677, RNA1509_33477, RNA1509_49809, RNA1509_53673, RNA1509_57405} {RNA1509_21677, RNA1509_33477, RNA1509_49809, RNA1509_53673, RNA1509_57405, RNA815_16763} |
| 16. | MligTC455_18665 | 532 | 11.09 | Mlig455_003600 | Neo: - Age: - Region-enriched R5: 1.894/0.00192 |
PPP2R1B | 0.951 | - | - | - | 0.951 | - | - | Mlig455_003600 {REF} {Length: 4431} {TRANSSPLICED} {Pfam: HEAT repeats [PF13646.8, score=98.4]; HEAT repeat [PF02985.24, score=92.6]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.4]; HEAT-like repeat [PF13513.8, score=36.4]; Adaptin N terminal region [PF01602.22, score=35.4]; Vacuolar 14 Fab1-binding region [PF12755.9, score=32.6]; V-ATPase subunit H [PF03224.16, score=20.6]} {Human: ENSG00000137713, PPP2R1B, protein phosphatase 2 scaffold subunit Abeta, [Score=194, Expect=1e-53]; ENSG00000105568, PPP2R1A, protein phosphatase 2 scaffold subunit Aalpha, [Score=194, Expect=9e-54]} {Mouse: ENSMUSG00000032058, Ppp2r1b, protein phosphatase 2, regulatory subunit A, beta, [Score=195, Expect=3e-54]; ENSMUSG00000007564, Ppp2r1a, protein phosphatase 2, regulatory subunit A, alpha, [Score=194, Expect=8e-54]} {Dmel: FBgn0260439, Pp2A-29B, Protein phosphatase 2A at 29B, [Score=142, Expect=6e-36]} {Celegans: WBGene00003901, paa-1, Probable serine/threonine-protein phosphatase PP2A regulatory subunit, [Score=172, Expect=3e-46]} {Smed: dd_Smed_v6_3840_0_1, dd_Smed_v6_3840_0_1, [RH, Score=361, Expect=5e-117]} {RNA1509_6573} {RNA1310_2047.1} {RNA815_3133} |
| 17. | MligTC455_28897 | 308 | 6.42 | Mlig455_030032 | Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.123 Region-enriched R3: 2.756/0.00353 |
URGCP | 0.951 | - | - | - | 0.951 | - | - | Mlig455_030032 {REF} {Length: 7627} {TRANSSPLICED} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=27.6]; Dynamin family [PF00350.25, score=22.0]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=19.7]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=116, Expect=1e-25]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=515, Expect=5e-151]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=513, Expect=2e-150]} {RNA1509_16396} {RNA1310_766.1} {RNA815_2094.1} |
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