Data search
Results for MligTC455_35766
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_35766 | 2077 | 43.28 | Mlig455_036201 | Neo: - Age: logFC(26M/2M)=0.606 Regeneration-enriched R6: 1.830 |
HNRNPL | Mlig455_036201 {REF} {Length: 3072} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=117.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.5]; Occluded RNA-recognition motif [PF16842.7, score=33.5]; RRM-like domain [PF11835.10, score=32.1]} {Human: ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=223, Expect=2e-64]; ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=223, Expect=2e-64]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=224, Expect=8e-65]} {Dmel: FBgn0003435, sm, smooth, [Score=224, Expect=3e-66]} {Celegans: WBGene00016624, C44B7.2, [Score=192, Expect=2e-53]} {Smed: dd_Smed_v6_7465_0_1, dd_Smed_v6_7465_0_1, [Score=233, Expect=5e-68]} {RNA1509_2750} {RNA1310_3778.1, RNA1509_2750} {RNA1509_2750, RNA815_9958} |
Cumulative graph for MligTC455_35766
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.663 | 5.617 | 0.07847 | 0.61319 | |
| RegionR2 | 0.684 | 5.617 | 0.09767 | 0.38391 | |
| RegionR3 | -0.229 | 5.617 | 0.50419 | 0.99595 | |
| RegionR4 | 0.027 | 5.617 | 0.94355 | 1.00000 | |
| RegionR5 | 0.232 | 5.617 | 0.44567 | 0.80702 | |
| RegionR6 | 0.28 | 5.617 | 0.40909 | 0.97854 | |
| RegionR7 | 0.553 | 5.617 | 0.14591 | 0.71026 | |
| RegionR8 | 0.116 | 5.617 | 0.81440 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.776 | 5.617 | 0.01319 | 0.49049 | |
| RegenerationR2 | 0.442 | 5.617 | 0.22304 | 0.67058 | |
| RegenerationR3 | 1.374 | 5.617 | 0.00082 | 0.04407 | |
| RegenerationR4 | 1.208 | 5.617 | 0.00263 | 0.06653 | |
| RegenerationR5 | 1.696 | 5.617 | 0.00001 | 0.00210 | |
| RegenerationR6 | 1.83 | 5.617 | 0.00000 | 0.00054 | |
| RegenerationBL | 1.399 | 5.617 | 0.00020 | 0.00728 | |
| RegenerationTP | 0.763 | 5.617 | 0.08253 | 0.45569 |
Genes with expression patterns similar to MligTC455_35766
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_35766 | 2077 | 43.28 | Mlig455_036201 | Neo: - Age: logFC(26M/2M)=0.606 Regeneration-enriched R6: 1.830 |
HNRNPL | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_036201 {REF} {Length: 3072} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=117.9]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=84.5]; Occluded RNA-recognition motif [PF16842.7, score=33.5]; RRM-like domain [PF11835.10, score=32.1]} {Human: ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=223, Expect=2e-64]; ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=223, Expect=2e-64]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=224, Expect=8e-65]} {Dmel: FBgn0003435, sm, smooth, [Score=224, Expect=3e-66]} {Celegans: WBGene00016624, C44B7.2, [Score=192, Expect=2e-53]} {Smed: dd_Smed_v6_7465_0_1, dd_Smed_v6_7465_0_1, [Score=233, Expect=5e-68]} {RNA1509_2750} {RNA1310_3778.1, RNA1509_2750} {RNA1509_2750, RNA815_9958} |
| 2. | MligTC455_35765 | 2122 | 44.2 | Mlig455_005545 | Neo: - Age: - Regeneration-enriched R6: 1.822 |
HNRNPL | 5.892 | 0.999 | 0.998 | 0.927 | 0.999 | 0.973 | 0.996 | Mlig455_005545 {REF} {Length: 3613} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=118.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=85.2]; Occluded RNA-recognition motif [PF16842.7, score=34.2]; RRM-like domain [PF11835.10, score=32.1]} {Human: ENSG00000282947, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=225, Expect=4e-65]; ENSG00000104824, HNRNPL, heterogeneous nuclear ribonucleoprotein L, [Score=225, Expect=4e-65]} {Mouse: ENSMUSG00000015165, Hnrnpl, heterogeneous nuclear ribonucleoprotein L, [Score=225, Expect=2e-65]} {Dmel: FBgn0003435, sm, smooth, [Score=225, Expect=2e-66]} {Celegans: WBGene00016624, C44B7.2, [Score=189, Expect=2e-52]} {Smed: dd_Smed_v6_7465_0_1, dd_Smed_v6_7465_0_1, [Score=234, Expect=2e-68]} {RNA1509_24811, RNA1509_8468} {RNA1310_3778.1, RNA1509_24811, RNA1509_8468} {RNA1509_24811, RNA1509_8468, RNA815_9958} |
| 3. | MligTC455_29056 | 214 | 4.46 | Mlig455_005934 | Neo: Int S/G2/M Age: Up-Up-Down |
1.681 | - | - | - | 0.951 | 0.730 | - | Mlig455_005934 {REF} {Length: 3571} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=54.7, Expect=7e-07]} {RNA1509_15781} {RNA1310_3922, RNA1509_15781} {RNA1509_15781, RNA815_5825} | |
| 4. | MligTC455_39981 | 457 | 9.52 | Mlig455_028079 | Neo: Int S/G2/M Age: - |
MRPL17 | 1.668 | - | - | - | 0.958 | 0.710 | - | Mlig455_028079 {REF} {Length: 1342} {TRANSSPLICED} {Pfam: Ribosomal protein L17 [PF01196.21, score=29.7]} {Human: ENSG00000158042, MRPL17, mitochondrial ribosomal protein L17, [RH, Score=57.4, Expect=3e-10]} {Mouse: ENSMUSG00000030879, Mrpl17, mitochondrial ribosomal protein L17, [RH, Score=57.8, Expect=2e-10]} {Dmel: FBgn0035122, mRpL17, mitochondrial ribosomal protein L17, [RH, Score=67.0, Expect=4e-14]} {Smed: dd_Smed_v6_3289_0_1, dd_Smed_v6_3289_0_1, [RH, Score=105, Expect=1e-28]} {RNA1509_21955, RNA1509_25190} {RNA1310_25456, RNA1509_21955, RNA1509_25190} {RNA1509_21955, RNA1509_25190, RNA815_9956} |
| 5. | MligTC455_20452 | 725 | 15.1 | Mlig455_068384, Mlig455_068393 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.348 Region-specific R5: 3.269 Region-enriched R5: 2.907/0.00000 |
0.966 | - | - | - | 0.966 | - | - | Mlig455_068384 {REF} {Length: 3173} {RNA1509_25509} {RNA1310_31646} {RNA815_14776.1} Mlig455_068393 {REF} {Length: 1739} {TRANSSPLICED} {RNA1509_25509, RNA1509_60017} {RNA1310_31646, RNA1509_25509, RNA1509_60017} {RNA1509_25509, RNA1509_60017, RNA815_14776.1} |
|
| 6. | MligTC455_04563 | 750 | 15.62 | Mlig455_038799 | Neo: - Age: - |
0.965 | - | - | - | 0.965 | - | - | Mlig455_038799 {REF} {Length: 2039} {RNA1509_24595, RNA1509_54341} {RNA1310_59579, RNA1509_24595} {RNA1509_24595, RNA815_27833.1} | |
| 7. | MligTC455_32043 | 523 | 10.9 | Mlig455_022284, Mlig455_048236 | Neo: - Age: - Region-enriched R5: 1.756/0.01668 |
BUD23 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_022284 {REF} {Length: 1653} {Pfam: Methyltransferase involved in Williams-Beuren syndrome [PF12589.10, score=43.0]} {Human: ENSG00000071462, BUD23, BUD23, rRNA methyltransferase and ribosome maturation factor, [Score=146, Expect=5e-43]} {Mouse: ENSMUSG00000005378, Bud23, BUD23, rRNA methyltransferase and ribosome maturation factor, [Score=145, Expect=6e-43]} {Dmel: FBgn0037543, CG10903, [Score=154, Expect=3e-46]} {Celegans: WBGene00016166, C27F2.4, [Score=134, Expect=8e-39]} {Smed: dd_Smed_v6_5605_0_2, dd_Smed_v6_5605_0_2, [Score=155, Expect=6e-47]} {RNA1509_15072} {RNA1310_58165} {RNA815_16056} Mlig455_048236 {REF} {Length: 1884} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF08241.14, score=48.7]; Methyltransferase domain [PF13649.8, score=46.2]; Methyltransferase involved in Williams-Beuren syndrome [PF12589.10, score=42.2]; Methyltransferase domain [PF13847.8, score=28.2]; Methyltransferase domain [PF08242.14, score=25.7]; Methyltransferase domain [PF13489.8, score=23.9]; Ribosomal protein L11 methyltransferase (PrmA) [PF06325.15, score=20.6]} {Human: ENSG00000071462, BUD23, BUD23, rRNA methyltransferase and ribosome maturation factor, [RH, Score=251, Expect=8e-83]} {Mouse: ENSMUSG00000005378, Bud23, BUD23, rRNA methyltransferase and ribosome maturation factor, [RH, Score=251, Expect=3e-83]} {Dmel: FBgn0037543, CG10903, [RH, Score=270, Expect=8e-91]} {Celegans: WBGene00016166, C27F2.4, [RH, Score=238, Expect=2e-78]} {Smed: dd_Smed_v6_5605_0_2, dd_Smed_v6_5605_0_2, [RH, Score=264, Expect=1e-88]} {RNA1509_15072, RNA1509_47515} {RNA1310_36189, RNA1509_47515} {RNA1509_47515, RNA815_16056} |
| 8. | MligTC455_50459 | 483 | 10.05 | Mlig455_023585, Mlig455_067004 | Neo: Neoblast, stringent Age: - Region-enriched R4: 2.547/0.00928 |
0.96 | - | - | - | 0.960 | - | - | Mlig455_023585 {REF} {Length: 2596} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=38.4]} {RNA1509_32778} {RNA1310_38674} {RNA815_25642} Mlig455_067004 {REF} {Length: 2455} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=38.4]} {RNA1509_32778} {RNA1310_38674, RNA1509_32778} {RNA1509_32778, RNA815_25642} |
|
| 9. | MligTC455_43778 | 880 | 18.33 | Mlig455_041613 | Neo: - Age: - Region-enriched R4: 1.061/0.03397 |
WDR45 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_041613 {REF} {Length: 2756} {Pfam: WD domain, G-beta repeat [PF00400.34, score=34.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.0]} {Human: ENSG00000196998, WDR45, WD repeat domain 45, [RH, Score=214, Expect=8e-66]} {Mouse: ENSMUSG00000039382, Wdr45, WD repeat domain 45, [Score=216, Expect=5e-67]} {Dmel: FBgn0037648, CG11975, [Score=163, Expect=8e-47]} {Celegans: WBGene00012641, epg-6, Ectopic P Granules, [Score=92.8, Expect=1e-20]} {Smed: dd_Smed_v6_4178_0_1, dd_Smed_v6_4178_0_1, [Score=144, Expect=2e-39]} {RNA1509_10583, RNA1509_29232} {RNA1310_6509.1, RNA1509_10583, RNA1509_29232} {RNA1509_10583, RNA1509_29232, RNA815_2908} |
| 10. | MligTC455_43779 | 878 | 18.3 | Mlig455_041635 | Neo: - Age: Up-Down-Up Region-enriched R4: 1.074/0.03063 |
WDR45 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_041635 {REF} {Length: 2705} {Pfam: WD domain, G-beta repeat [PF00400.34, score=34.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.0]} {Human: ENSG00000196998, WDR45, WD repeat domain 45, [RH, Score=216, Expect=1e-66]} {Mouse: ENSMUSG00000039382, Wdr45, WD repeat domain 45, [Score=219, Expect=7e-68]} {Dmel: FBgn0037648, CG11975, [Score=162, Expect=1e-46]} {Celegans: WBGene00012641, epg-6, Ectopic P Granules, [Score=92.8, Expect=1e-20]} {Smed: dd_Smed_v6_4178_0_1, dd_Smed_v6_4178_0_1, [Score=144, Expect=2e-39]} {RNA1509_10583} {RNA1310_6509.1} {RNA815_2908} |
| 11. | MligTC455_28897 | 308 | 6.42 | Mlig455_030032 | Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.123 Region-enriched R3: 2.756/0.00353 |
URGCP | 0.952 | - | - | - | 0.952 | - | - | Mlig455_030032 {REF} {Length: 7627} {TRANSSPLICED} {Pfam: Root hair defective 3 GTP-binding protein (RHD3) [PF05879.14, score=27.6]; Dynamin family [PF00350.25, score=22.0]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]; Guanylate-binding protein, N-terminal domain [PF02263.21, score=19.7]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [Score=116, Expect=1e-25]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [Score=515, Expect=5e-151]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [Score=513, Expect=2e-150]} {RNA1509_16396} {RNA1310_766.1} {RNA815_2094.1} |
| 12. | MligTC455_04564 | 742 | 15.45 | Mlig455_038816 | Neo: - Age: Down-Up-Down |
GET4 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_038816 {REF} {Length: 3703} {TRANSSPLICED} {Pfam: Golgi to ER traffic protein 4 [PF04190.15, score=170.8]} {Human: ENSG00000239857, GET4, golgi to ER traffic protein 4, [RH, Score=201, Expect=5e-62]} {Mouse: ENSMUSG00000025858, Get4, golgi to ER traffic protein 4, [RH, Score=186, Expect=2e-56]} {Dmel: FBgn0086605, CG9853, [RH, Score=145, Expect=6e-41]} {Smed: dd_Smed_v6_7734_0_1, dd_Smed_v6_7734_0_1, [RH, Score=169, Expect=4e-50]} {RNA1509_32148, RNA1509_54341} {RNA1310_28338.1, RNA1509_54341} {RNA1509_54341, RNA815_12431} |
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