Data search
Results for MligTC455_50475
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50475 | 165 | 3.43 | Mlig455_022326 | Neo: - Age: - Regeneration-downregulated R4: -4.258 Regeneration-depleted R4: -4.258 |
RNF25 | Mlig455_022326 {REF} {Length: 2107} {TRANSSPLICED} {Pfam: RWD domain [PF05773.24, score=56.4]; RING-like zinc finger [PF17123.7, score=33.6]; Ring finger domain [PF13639.8, score=29.6]; RING-type zinc-finger [PF13445.8, score=25.5]; zinc-RING finger domain [PF14634.8, score=21.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=20.6]} {Human: ENSG00000163481, RNF25, ring finger protein 25, [RH, Score=119, Expect=7e-29]} {Mouse: ENSMUSG00000026171, Rnf25, ring finger protein 25, [RH, Score=125, Expect=3e-31]} {Dmel: FBgn0033884, CG13344, [RH, Score=91.3, Expect=9e-20]} {Celegans: WBGene00021812, Y53G8AR.5, [RH, Score=54.7, Expect=5e-08]} {RNA1509_6393} {RNA1310_12987} {RNA815_3992.1} |
Cumulative graph for MligTC455_50475
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.136 | 2.483 | 0.42929 | 1.00000 | |
| RegionR2 | 1.327 | 2.483 | 0.12924 | 0.44617 | |
| RegionR3 | 0.409 | 2.483 | 0.52035 | 1.00000 | |
| RegionR4 | -0.859 | 2.483 | 0.25485 | 0.55569 | |
| RegionR5 | -1.088 | 2.483 | 0.05980 | 0.21292 | |
| RegionR6 | 0.028 | 2.483 | 0.98031 | 1.00000 | |
| RegionR7 | 0.795 | 2.483 | 0.30223 | 0.93695 | |
| RegionR8 | 0.524 | 2.483 | 0.59134 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.06 | 2.483 | 0.51526 | 1.00000 | |
| RegenerationR2 | -2.606 | 2.483 | 0.00714 | 0.13419 | |
| RegenerationR3 | -1.221 | 2.483 | 0.14989 | 0.57877 | |
| RegenerationR4 | -4.258 | 2.483 | 0.00001 | 0.00160 | Specific for R4: -4.258 |
| RegenerationR5 | -1.611 | 2.483 | 0.04986 | 0.36017 | |
| RegenerationR6 | -2.586 | 2.483 | 0.01485 | 0.15001 | |
| RegenerationBL | -5.612 | 2.483 | 0.01298 | 0.11737 | |
| RegenerationTP | -5.27 | 2.483 | 0.01399 | 0.20239 |
Genes with expression patterns similar to MligTC455_50475
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50475 | 165 | 3.43 | Mlig455_022326 | Neo: - Age: - Regeneration-downregulated R4: -4.258 Regeneration-depleted R4: -4.258 |
RNF25 | 5 | 1.000 | 1.000 | 1.000 | - | 1.000 | 1.000 | Mlig455_022326 {REF} {Length: 2107} {TRANSSPLICED} {Pfam: RWD domain [PF05773.24, score=56.4]; RING-like zinc finger [PF17123.7, score=33.6]; Ring finger domain [PF13639.8, score=29.6]; RING-type zinc-finger [PF13445.8, score=25.5]; zinc-RING finger domain [PF14634.8, score=21.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=20.6]} {Human: ENSG00000163481, RNF25, ring finger protein 25, [RH, Score=119, Expect=7e-29]} {Mouse: ENSMUSG00000026171, Rnf25, ring finger protein 25, [RH, Score=125, Expect=3e-31]} {Dmel: FBgn0033884, CG13344, [RH, Score=91.3, Expect=9e-20]} {Celegans: WBGene00021812, Y53G8AR.5, [RH, Score=54.7, Expect=5e-08]} {RNA1509_6393} {RNA1310_12987} {RNA815_3992.1} |
| 2. | MligTC455_26941 | 8 | 0.16 | Mlig455_040102 | Neo: - Age: Down-Up-Down |
0.984 | - | - | - | - | 0.984 | - | Mlig455_040102 {REF} {Length: 3150} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=120.5]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=72.4, Expect=3e-13]} {RNA1509_27849} {RNA1310_5710.1} {RNA815_6291.1} | |
| 3. | MligTC455_16228 | 46 | 0.96 | Mlig455_002978 | Neo: Irradiation Age: Down-Up-Down |
0.968 | - | - | - | - | - | 0.968 | Mlig455_002978 {REF} {Length: 1440} {NoTransDecoderORF} {RNA1509_22773} {RNA1310_2370} {RNA815_11138} | |
| 4. | MligTC455_25445 | 12 | 0.24 | Mlig455_021534 | Neo: - Age: Up-Down-Up |
CACNA1D | 0.964 | - | - | - | - | 0.964 | - | Mlig455_021534 {REF} {Length: 4880} {Pfam: Ion transport protein [PF00520.33, score=359.2]; Voltage gated calcium channel IQ domain [PF08763.13, score=102.5]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=91.9]} {Human: ENSG00000157388, CACNA1D, calcium voltage-gated channel subunit alpha1 D, [Score=971, Expect=0.0]; ENSG00000081248, CACNA1S, calcium voltage-gated channel subunit alpha1 S, [Score=957, Expect=0.0]; ENSG00000151067, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=944, Expect=0.0]; ENSG00000285479, CACNA1C, calcium voltage-gated channel subunit alpha1 C, [Score=944, Expect=0.0]} {Mouse: ENSMUSG00000015968, Cacna1d, calcium channel, voltage-dependent, L type, alpha 1D subunit, [Score=971, Expect=0.0]; ENSMUSG00000051331, Cacna1c, calcium channel, voltage-dependent, L type, alpha 1C subunit, [Score=959, Expect=0.0]; ENSMUSG00000026407, Cacna1s, calcium channel, voltage-dependent, L type, alpha 1S subunit, [Score=958, Expect=0.0]} {Dmel: FBgn0001991, Ca-alpha1D, Ca[2+]-channel protein alpha[[1]] subunit D, [Score=989, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=1053, Expect=0.0]} {Smed: dd_Smed_v6_8899_0_17, dd_Smed_v6_8899_0_17, [Score=1104, Expect=0.0]} {RNA1509_48072} {RNA1310_376.1} {RNA815_1126.1} |
| 5. | MligTC455_14857 | 21 | 0.43 | Mlig455_014926 | Neo: - Age: - |
0.963 | - | - | - | - | - | 0.963 | Mlig455_014926 {REF} {Length: 368} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_57743.2} {RNA815_45547} |
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