Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_50823 | 13 | 0.28 | Mlig455_052398, Mlig455_052414 | Neo: - Age: - |
Mlig455_052398 {REF} {Length: 582} {NoTransDecoderORF} {RNA1509_43398} {RNA1310_11789.1} {RNA815_4854} Mlig455_052414 {REF} {Length: 288} {NoTransDecoderORF} {RNA1509_43398} {RNA1310_11789.1} {RNA815_4854} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -1.57 | 0.768 | 1.00000 | 1.00000 | |
RegionR2 | 0.625 | 0.768 | 1.00000 | 1.00000 | |
RegionR3 | -1.147 | 0.768 | 1.00000 | 1.00000 | |
RegionR4 | -2.557 | 0.768 | 1.00000 | 1.00000 | |
RegionR5 | 1.993 | 0.768 | 0.54955 | 0.91138 | |
RegionR6 | 2.51 | 0.768 | 0.36522 | 0.94657 | |
RegionR7 | -0.052 | 0.768 | 0.99990 | 1.00000 | |
RegionR8 | 0.198 | 0.768 | 0.99997 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 1.46 | 0.768 | 1.00000 | 1.00000 | |
RegenerationR2 | 2.714 | 0.768 | 0.38351 | 0.80377 | |
RegenerationR3 | 2.697 | 0.768 | 0.32746 | 0.75401 | |
RegenerationR4 | 1.088 | 0.768 | 1.00000 | 1.00000 | |
RegenerationR5 | 0.291 | 0.768 | 0.50113 | 0.85905 | |
RegenerationR6 | -2.217 | 0.768 | 0.76423 | 0.95841 | |
RegenerationBL | -0.675 | 0.768 | 1.00000 | 1.00000 | |
RegenerationTP | 4.139 | 0.768 | 0.28075 | 0.72851 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_50823 | 13 | 0.28 | Mlig455_052398, Mlig455_052414 | Neo: - Age: - |
4 | 1.000 | 1.000 | - | - | 1.000 | 1.000 | Mlig455_052398 {REF} {Length: 582} {NoTransDecoderORF} {RNA1509_43398} {RNA1310_11789.1} {RNA815_4854} Mlig455_052414 {REF} {Length: 288} {NoTransDecoderORF} {RNA1509_43398} {RNA1310_11789.1} {RNA815_4854} |
|
2. | MligTC455_44684 | 39 | 0.82 | Mlig455_037824, Mlig455_065518, Mlig455_067165 | Neo: - Age: - |
1.876 | 0.899 | - | - | - | - | 0.977 | Mlig455_037824 {REF} {Length: 207} {NoTransDecoderORF} {RNA1509_8829} {RNA1310_3455} {RNA815_21111} Mlig455_065518 {REF} {Length: 208} {NoTransDecoderORF} {RNA1509_8829} {RNA1310_3455} {RNA815_21111} Mlig455_067165 {REF} {Length: 207} {NoTransDecoderORF} {RNA1509_8829} {RNA1310_3455} {RNA815_21111} |
|
3. | MligTC455_52470 | 442 | 9.22 | Mlig455_021832 | Neo: Irradiation Age: - Region-enriched R8: 6.102/0.00000 Regeneration-downregulated BL: -8.156 Regeneration-depleted BL: -8.156 |
DRD3 | 0.988 | - | - | - | - | - | 0.988 | Mlig455_021832 {REF} {Length: 2644} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=153.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=40.5]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=30.9]} {Human: ENSG00000151577, DRD3, dopamine receptor D3, [Score=78.2, Expect=5e-15]; ENSG00000163394, CCKAR, cholecystokinin A receptor, [Score=74.7, Expect=8e-14]} {Mouse: ENSMUSG00000029193, Cckar, cholecystokinin A receptor, [Score=73.2, Expect=2e-13]; ENSMUSG00000031932, Gpr83, G protein-coupled receptor 83, [Score=72.4, Expect=3e-13]; ENSMUSG00000026432, Avpr1b, arginine vasopressin receptor 1B, [Score=72.4, Expect=3e-13]; ENSMUSG00000022705, Drd3, dopamine receptor D3, [Score=71.6, Expect=5e-13]; ENSMUSG00000020081, Tacr2, tachykinin receptor 2, [Score=71.6, Expect=4e-13]; ENSMUSG00000028172, Tacr3, tachykinin receptor 3, [Score=71.6, Expect=5e-13]} {Dmel: FBgn0038542, TyrR, Tyramine receptor, [Score=75.5, Expect=3e-14]} {Celegans: WBGene00022004, npr-22, NeuroPeptide Receptor family, [Score=81.6, Expect=1e-16]} {Smed: dd_Smed_v6_16752_0_1, dd_Smed_v6_16752_0_1, [Score=72.0, Expect=2e-13]} {RNA1509_15350} {RNA1310_8194, RNA1509_15350} {RNA1509_15350, RNA815_11760.1} |
4. | MligTC455_06293 | 103 | 2.15 | Mlig455_053860, Mlig455_053875, Mlig455_055343 | Neo: - Age: - |
0.981 | - | - | - | - | 0.981 | - | Mlig455_053860 {REF} {Length: 469} {RNA1310_95227} {RNA815_45163} Mlig455_053875 {REF} {Length: 533} {RNA1310_95227} {RNA815_45163} Mlig455_055343 {REF} {Length: 526} {RNA1310_95227} {RNA815_45163} |
|
5. | MligTC455_19567 | 76 | 1.59 | Mlig455_017855, Mlig455_047877 | Neo: - Age: - Region-enriched R2: 7.793/0.00005 |
0.976 | - | - | - | - | 0.976 | - | Mlig455_017855 {REF} {Length: 1874} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=26.0]} {Smed: dd_Smed_v6_7534_0_1, dd_Smed_v6_7534_0_1, [RH, Score=179, Expect=3e-51]} {RNA1509_52053} {RNA1310_13207} {RNA815_13534} Mlig455_047877 {REF} {Length: 1820} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=28.8]} {Smed: dd_Smed_v6_7534_0_1, dd_Smed_v6_7534_0_1, [RH, Score=179, Expect=2e-51]} {RNA1509_52053} {RNA1310_13207} {RNA815_13534} |
|
6. | MligTC455_09922 | 12 | 0.25 | Mlig455_033165 | Neo: - Age: - |
0.975 | 0.975 | - | - | - | - | - | Mlig455_033165 {REF} {Length: 616} {NoTransDecoderORF} {RNA1310_72784} {RNA815_39906} | |
7. | MligTC455_52469 | 900 | 18.74 | Mlig455_021754 | Neo: Irradiation Age: - Region-enriched R8: 7.394/0.00000 |
TACR3 | 0.971 | - | - | - | - | - | 0.971 | Mlig455_021754 {REF} {Length: 2340} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=73.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=20.7]} {Human: ENSG00000169836, TACR3, tachykinin receptor 3, [Score=65.1, Expect=8e-11]; ENSG00000075073, TACR2, tachykinin receptor 2, [Score=63.2, Expect=3e-10]} {Mouse: ENSMUSG00000028172, Tacr3, tachykinin receptor 3, [Score=64.3, Expect=9e-11]; ENSMUSG00000020081, Tacr2, tachykinin receptor 2, [Score=63.9, Expect=1e-10]} {Dmel: FBgn0085410, TrissinR, Trissin receptor, [Score=66.2, Expect=2e-11]} {Celegans: WBGene00022004, npr-22, NeuroPeptide Receptor family, [Score=70.1, Expect=8e-13]} {Smed: dd_Smed_v6_45004_0_1, dd_Smed_v6_45004_0_1, [Score=58.2, Expect=3e-09]} {RNA1509_15830} {RNA1310_8194} {RNA815_11760.1} |
8. | MligTC455_46115 | 57 | 1.18 | Mlig455_048801 | Neo: - Age: Up-Down-Down |
CRY1 | 0.969 | - | - | - | - | 0.969 | - | Mlig455_048801 {REF} {Length: 3004} {TRANSSPLICED} {Pfam: FAD binding domain of DNA photolyase [PF03441.16, score=194.5]; DNA photolyase [PF00875.20, score=139.4]} {Human: ENSG00000008405, CRY1, cryptochrome circadian regulator 1, [RH, Score=466, Expect=3e-157]; ENSG00000121671, CRY2, cryptochrome circadian regulator 2, [RH, Score=452, Expect=5e-152]} {Mouse: ENSMUSG00000020038, Cry1, cryptochrome 1 (photolyase-like), [RH, Score=465, Expect=6e-157]; ENSMUSG00000068742, Cry2, cryptochrome 2 (photolyase-like), [RH, Score=460, Expect=3e-155]} {Dmel: FBgn0016054, phr6-4, (6-4)-photolyase, [Score=361, Expect=1e-117]} {RNA1509_28219} {RNA1310_6554, RNA1509_28219} {RNA1509_28219, RNA815_8162} |
9. | MligTC455_24406 | 204 | 4.25 | Mlig455_043947 | Neo: - Age: - Region-specific R2: 3.852 Region-enriched R2: 3.953/0.00003 |
0.967 | - | - | - | - | 0.967 | - | Mlig455_043947 {REF} {Length: 1609} {RNA1509_54091} {RNA1310_68348.1, RNA1509_54091} {RNA1509_54091, RNA815_33570.1} | |
10. | MligTC455_08494 | 76 | 1.59 | Mlig455_025971 | Neo: Irradiation Age: - Region-enriched R7: 4.135/0.03582 |
0.966 | - | - | - | - | - | 0.966 | Mlig455_025971 {REF} {Length: 2488} {Pfam: LicD family [PF04991.15, score=49.9]} {Smed: dd_Smed_v6_5971_0_1, dd_Smed_v6_5971_0_1, [Score=105, Expect=2e-25]} {RNA1310_25034} {RNA815_33191} | |
11. | MligTC455_47034 | 20 | 0.42 | Mlig455_059638 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_059638 {REF} {Length: 932} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=54.2]} {RNA1509_20101} {RNA1310_14959.1} {RNA815_9852.1} | |
12. | MligTC455_08735 | 46 | 0.96 | Mlig455_028395 | Neo: - Age: - Regeneration-upregulated R2: 5.641 Regeneration-enriched R2: 5.641 |
0.963 | - | - | - | - | 0.963 | - | Mlig455_028395 {REF} {Length: 2509} {TRANSSPLICED} {NoTransDecoderORF} | |
13. | MligTC455_07377 | 12 | 0.25 | Mlig455_050202, Mlig455_066952 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_050202 {REF} {Length: 183} {NoTransDecoderORF} {RNA1310_52242} Mlig455_066952 {REF} {Length: 141} {NoTransDecoderORF} {RNA1310_52242} |
|
14. | MligTC455_10786 | 15 | 0.32 | Mlig455_018164 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_018164 {REF} {Length: 1819} {Pfam: F5/8 type C domain [PF00754.27, score=24.0]} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [RH, Score=57.8, Expect=5e-10]} {RNA1310_114361} | |
15. | MligTC455_37589 | 13 | 0.27 | Mlig455_017305, Mlig455_037210, Mlig455_055126 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_017305 {REF} {Length: 2980} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=126.4]; Endonuclease-reverse transcriptase [PF14529.8, score=76.8]} {RNA1509_32599} {RNA1310_1188} {RNA815_252.1} Mlig455_037210 {REF} {Length: 941} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=30.9]; Viral Unique Long protein 21a [PF17636.4, score=18.7]} {RNA1509_58025} {RNA1310_5710.1} {RNA815_14744.1} Mlig455_055126 {REF} {Length: 2945} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=131.6]} {RNA1509_32599} {RNA1310_1659} {RNA815_252.1} |
|
16. | MligTC455_03556 | 34 | 0.7 | Mlig455_037044 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_037044 {REF} {Length: 1030} {NoTransDecoderORF} {RNA1509_57090} {RNA1310_93213} {RNA815_9381.1} | |
17. | MligTC455_17448 | 5 | 0.11 | Mlig455_029739 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_029739 {REF} {Length: 758} {NoTransDecoderORF} {RNA1310_32263} | |
18. | MligTC455_15441 | 62 | 1.29 | Mlig455_037158 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_037158 {REF} {Length: 2997} {Pfam: RNA repair pathway DNA polymerase beta family [PF10127.11, score=20.8]} {RNA1509_39460} {RNA1310_16073.2} {RNA815_15926} | |
19. | MligTC455_54436 | 6 | 0.13 | Mlig455_025459 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_025459 {REF} {Length: 136} {NoTransDecoderORF} | |
20. | MligTC455_01284 | 7 | 0.14 | Mlig455_037143 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_037143 {REF} {Length: 370} {NoTransDecoderORF} | |
21. | MligTC455_13635 | 16 | 0.33 | Mlig455_014568 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_014568 {REF} {Length: 1825} | |
22. | MligTC455_53520 | 103 | 2.14 | Mlig455_010193 | Neo: - Age: - |
CHD5 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_010193 {REF} {Length: 5974} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=69.3]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=59.5]; PHD-like zinc-binding domain [PF13771.8, score=24.4]; PHD-finger [PF13831.8, score=22.7]} {Human: ENSG00000116254, CHD5, chromodomain helicase DNA binding protein 5, [Score=316, Expect=1e-92]; ENSG00000170004, CHD3, chromodomain helicase DNA binding protein 3, [Score=305, Expect=1e-88]; ENSG00000111642, CHD4, chromodomain helicase DNA binding protein 4, [Score=304, Expect=1e-88]; ENSG00000285238, AC006064.6, novel transcript, [Score=303, Expect=4e-88]} {Mouse: ENSMUSG00000005045, Chd5, chromodomain helicase DNA binding protein 5, [Score=320, Expect=4e-94]; ENSMUSG00000063870, Chd4, chromodomain helicase DNA binding protein 4, [Score=307, Expect=1e-89]} {Dmel: FBgn0262519, Mi-2, [Score=293, Expect=7e-85]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [Score=269, Expect=5e-77]} {Smed: dd_Smed_v6_2331_0_1, dd_Smed_v6_2331_0_1, [Score=457, Expect=6e-144]} {RNA1509_2055} {RNA1310_619} {RNA815_1273.1} |
23. | MligTC455_11840 | 7 | 0.14 | Mlig455_051818 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_051818 {REF} {Length: 2700} {NoTransDecoderORF} {RNA1310_103888} {RNA815_46921} | |
24. | MligTC455_14133 | 34 | 0.7 | Mlig455_049257 | Neo: Irradiation Age: - Region-enriched R6: 7.088/0.00083 |
GLS | 0.95 | - | 0.950 | - | - | - | - | Mlig455_049257 {REF} {Length: 2534} {Pfam: Glutaminase [PF04960.17, score=249.2]; Ankyrin repeats (3 copies) [PF12796.9, score=32.6]; Ankyrin repeats (many copies) [PF13637.8, score=31.0]; Ankyrin repeats (many copies) [PF13857.8, score=28.8]; EF-hand domain [PF17959.3, score=22.7]} {Human: ENSG00000115419, GLS, glutaminase, [Score=374, Expect=2e-120]; ENSG00000135423, GLS2, glutaminase 2, [Score=360, Expect=5e-116]} {Mouse: ENSMUSG00000026103, Gls, glutaminase, [Score=372, Expect=7e-120]; ENSMUSG00000044005, Gls2, glutaminase 2 (liver, mitochondrial), [Score=368, Expect=4e-119]} {Dmel: FBgn0261625, GLS, Glutaminase, [Score=379, Expect=8e-123]} {Celegans: WBGene00007480, glna-1, GLutamiNAse, [Score=383, Expect=6e-123]} {Smed: dd_Smed_v6_15097_0_1, dd_Smed_v6_15097_0_1, [Score=298, Expect=1e-94]} {RNA1509_45807} {RNA1310_38679, RNA1509_45807} |
25. | MligTC455_31395 | 29 | 0.6 | Mlig455_062240 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_062240 {REF} {Length: 3633} {RNA1509_13764, RNA1509_15598} {RNA1310_87.2, RNA1509_13764, RNA1509_15598} {RNA1509_13764, RNA1509_15598, RNA815_3880} |