Data search
Results for MligTC455_51424
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_51424 | 3418 | 71.21 | Mlig455_021978 | Neo: - Age: - Regeneration-downregulated R2: -1.182 Regeneration-depleted R2: -1.182 |
CALM2 | Mlig455_021978 {REF} {Length: 2208} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=141.5]; EF-hand domain pair [PF13499.8, score=125.9]; EF-hand domain pair [PF13833.8, score=108.2]; EF-hand domain [PF13405.8, score=98.7]; EF hand [PF13202.8, score=95.3]; EF-hand domain [PF14658.8, score=61.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=40.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.1]; EF-hand domain [PF08976.13, score=28.8]; Uncharacterised protein family (UPF0154) [PF03672.15, score=23.7]; Ca2+ insensitive EF hand [PF08726.12, score=21.4]; Dockerin type I domain [PF00404.20, score=21.1]; Caleosin related protein [PF05042.15, score=18.8]; Repeat of unknown function (DUF1103) [PF06513.13, score=18.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [RH, Score=295, Expect=2e-103]; ENSG00000198668, CALM1, calmodulin 1, [RH, Score=293, Expect=2e-103]; ENSG00000160014, CALM3, calmodulin 3, [RH, Score=291, Expect=2e-102]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [RH, Score=291, Expect=1e-102]; ENSMUSG00000036438, Calm2, calmodulin 2, [RH, Score=291, Expect=1e-102]; ENSMUSG00000001175, Calm1, calmodulin 1, [RH, Score=291, Expect=1e-102]} {Dmel: FBgn0000253, Cam, Calmodulin, [RH, Score=294, Expect=4e-104]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [RH, Score=295, Expect=1e-104]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [RH, Score=295, Expect=8e-105]} {RNA1509_10228, RNA1509_14586, RNA1509_22968} {RNA1310_22130, RNA1509_10228, RNA1509_14586, RNA1509_22968} {RNA1509_10228, RNA1509_14586, RNA1509_22968, RNA815_4214.1} |
Cumulative graph for MligTC455_51424
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.717 | 6.208 | 0.17198 | 0.79728 | |
| RegionR2 | 0.456 | 6.208 | 0.10720 | 0.40379 | |
| RegionR3 | -0.478 | 6.208 | 0.05978 | 0.43033 | |
| RegionR4 | 0.018 | 6.208 | 0.95074 | 1.00000 | |
| RegionR5 | 0.189 | 6.208 | 0.42594 | 0.78580 | |
| RegionR6 | 0.175 | 6.208 | 0.48111 | 1.00000 | |
| RegionR7 | -0.114 | 6.208 | 0.68562 | 1.00000 | |
| RegionR8 | 0.47 | 6.208 | 0.12653 | 0.65404 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.014 | 6.208 | 0.20249 | 0.94291 | |
| RegenerationR2 | -1.182 | 6.208 | 0.00007 | 0.00943 | Specific for R2: -1.182 |
| RegenerationR3 | -0.558 | 6.208 | 0.07889 | 0.46299 | |
| RegenerationR4 | -0.807 | 6.208 | 0.01253 | 0.17226 | |
| RegenerationR5 | -1 | 6.208 | 0.00104 | 0.05364 | |
| RegenerationR6 | -0.795 | 6.208 | 0.01101 | 0.12970 | |
| RegenerationBL | -0.669 | 6.208 | 0.02866 | 0.18816 | |
| RegenerationTP | -1.114 | 6.208 | 0.00085 | 0.04401 |
Genes with expression patterns similar to MligTC455_51424
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_51424 | 3418 | 71.21 | Mlig455_021978 | Neo: - Age: - Regeneration-downregulated R2: -1.182 Regeneration-depleted R2: -1.182 |
CALM2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_021978 {REF} {Length: 2208} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=141.5]; EF-hand domain pair [PF13499.8, score=125.9]; EF-hand domain pair [PF13833.8, score=108.2]; EF-hand domain [PF13405.8, score=98.7]; EF hand [PF13202.8, score=95.3]; EF-hand domain [PF14658.8, score=61.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=40.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.1]; EF-hand domain [PF08976.13, score=28.8]; Uncharacterised protein family (UPF0154) [PF03672.15, score=23.7]; Ca2+ insensitive EF hand [PF08726.12, score=21.4]; Dockerin type I domain [PF00404.20, score=21.1]; Caleosin related protein [PF05042.15, score=18.8]; Repeat of unknown function (DUF1103) [PF06513.13, score=18.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [RH, Score=295, Expect=2e-103]; ENSG00000198668, CALM1, calmodulin 1, [RH, Score=293, Expect=2e-103]; ENSG00000160014, CALM3, calmodulin 3, [RH, Score=291, Expect=2e-102]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [RH, Score=291, Expect=1e-102]; ENSMUSG00000036438, Calm2, calmodulin 2, [RH, Score=291, Expect=1e-102]; ENSMUSG00000001175, Calm1, calmodulin 1, [RH, Score=291, Expect=1e-102]} {Dmel: FBgn0000253, Cam, Calmodulin, [RH, Score=294, Expect=4e-104]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [RH, Score=295, Expect=1e-104]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [RH, Score=295, Expect=8e-105]} {RNA1509_10228, RNA1509_14586, RNA1509_22968} {RNA1310_22130, RNA1509_10228, RNA1509_14586, RNA1509_22968} {RNA1509_10228, RNA1509_14586, RNA1509_22968, RNA815_4214.1} |
| 2. | MligTC455_51423 | 3614 | 75.28 | Mlig455_021901 | Neo: - Age: - Regeneration-downregulated R2: -1.093 Regeneration-depleted R2: -1.093 |
CALM2 | 5.923 | 0.997 | 0.999 | 0.997 | 0.991 | 0.981 | 0.958 | Mlig455_021901 {REF} {Length: 2189} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=141.5]; EF-hand domain pair [PF13499.8, score=125.9]; EF-hand domain pair [PF13833.8, score=108.2]; EF-hand domain [PF13405.8, score=98.7]; EF hand [PF13202.8, score=95.3]; EF-hand domain [PF14658.8, score=61.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=40.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.1]; EF-hand domain [PF08976.13, score=28.8]; Uncharacterised protein family (UPF0154) [PF03672.15, score=23.7]; Ca2+ insensitive EF hand [PF08726.12, score=21.4]; Dockerin type I domain [PF00404.20, score=21.1]; Caleosin related protein [PF05042.15, score=18.8]; Repeat of unknown function (DUF1103) [PF06513.13, score=18.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [RH, Score=295, Expect=2e-103]; ENSG00000198668, CALM1, calmodulin 1, [RH, Score=293, Expect=2e-103]; ENSG00000160014, CALM3, calmodulin 3, [RH, Score=291, Expect=2e-102]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [RH, Score=291, Expect=1e-102]; ENSMUSG00000036438, Calm2, calmodulin 2, [RH, Score=291, Expect=1e-102]; ENSMUSG00000001175, Calm1, calmodulin 1, [RH, Score=291, Expect=1e-102]} {Dmel: FBgn0000253, Cam, Calmodulin, [RH, Score=294, Expect=4e-104]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [RH, Score=295, Expect=1e-104]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [RH, Score=295, Expect=8e-105]} {RNA1509_10228} {RNA1310_22130} {RNA815_4214.1} |
| 3. | MligTC455_39791 | 985 | 20.51 | Mlig455_053858, Mlig455_053873 | Neo: - |
0.977 | - | - | - | - | 0.977 | - | Mlig455_053858 {REF} {Length: 1795} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=21.3]} {RNA1509_14701} {RNA1310_21415, RNA1509_14701} {RNA1509_14701, RNA815_13655.1} Mlig455_053873 {REF} {Length: 1679} {RNA1509_14701} {RNA1310_21415} {RNA815_13655.1} |
|
| 4. | MligTC455_17267 | 266 | 5.55 | Mlig455_017106 | Neo: - Age: logFC(26M/2M)=-0.337 |
OTOP2 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_017106 {REF} {Length: 3746} {Pfam: Otopetrin [PF03189.15, score=249.6]} {Human: ENSG00000183034, OTOP2, otopetrin 2, [Score=58.9, Expect=2e-08]} {Mouse: ENSMUSG00000050201, Otop2, otopetrin 2, [Score=68.2, Expect=2e-11]} {Dmel: FBgn0259150, CG42265, [Score=181, Expect=4e-47]} {Celegans: WBGene00017449, otpl-3, OToPetrin-Like, [Score=114, Expect=2e-26]} {Smed: dd_Smed_v6_13612_0_2, dd_Smed_v6_13612_0_2, [RH, Score=297, Expect=2e-91]} {RNA1509_17427} {RNA1310_8650, RNA1509_17427} {RNA1509_17427, RNA815_9942} |
| 5. | MligTC455_42821 | 155 | 3.22 | Mlig455_040440 | Neo: - Age: - |
LARGE1 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_040440 {REF} {Length: 5152} {TRANSSPLICED} {Pfam: Glycosyl-transferase for dystroglycan [PF13896.8, score=181.1]; Glycosyl transferase family 8 [PF01501.22, score=52.6]} {Human: ENSG00000133424, LARGE1, LARGE xylosyl- and glucuronyltransferase 1, [RH, Score=649, Expect=0.0]; ENSG00000165905, LARGE2, LARGE xylosyl- and glucuronyltransferase 2, [RH, Score=620, Expect=0.0]} {Mouse: ENSMUSG00000004383, Large1, LARGE xylosyl- and glucuronyltransferase 1, [RH, Score=646, Expect=0.0]; ENSMUSG00000040434, Large2, LARGE xylosyl- and glucuronyltransferase 2, [RH, Score=622, Expect=0.0]} {Dmel: FBgn0032457, CG15483, [RH, Score=67.8, Expect=1e-11]} {Celegans: WBGene00010716, lge-1, Glycosyltransferase-like protein LARGE, [RH, Score=304, Expect=1e-93]} {Smed: dd_Smed_v6_15269_0_1, dd_Smed_v6_15269_0_1, [RH, Score=484, Expect=6e-165]} {RNA1509_51185} {RNA1310_11436, RNA1509_51185} {RNA1509_51185, RNA815_10031} |
| 6. | MligTC455_28207 | 237 | 4.93 | Mlig455_021871 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_021871 {REF} {Length: 5277} {Smed: dd_Smed_v6_3783_0_4, dd_Smed_v6_3783_0_4, [Score=266, Expect=5e-74]} {RNA1509_10937} {RNA1310_1042.1} {RNA815_1808} | |
| 7. | MligTC455_45856 | 1272 | 26.49 | Mlig455_059174 | Neo: - Age: logFC(26M/2M)=-0.206 Region-enriched R2: 1.425/0.00231 |
SEMA5A | 0.956 | - | - | - | - | 0.956 | - | Mlig455_059174 {REF} {Length: 5250} {Pfam: Sema domain [PF01403.21, score=180.0]; Thrombospondin type 1 domain [PF00090.21, score=87.3]; Spondin-like TSP1 domain [PF19028.2, score=64.1]} {Human: ENSG00000112902, SEMA5A, semaphorin 5A, [RH, Score=346, Expect=1e-99]; ENSG00000082684, SEMA5B, semaphorin 5B, [RH, Score=342, Expect=1e-97]} {Mouse: ENSMUSG00000052133, Sema5b, sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B, [RH, Score=349, Expect=6e-101]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [RH, Score=315, Expect=4e-89]} {Celegans: WBGene00000082, adt-1, ADAMTS family; ADT-1, [Score=119, Expect=1e-26]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=159, Expect=5e-39]} {RNA1509_3299} {RNA1310_897, RNA1509_3299} {RNA1509_3299, RNA815_4837} |
| 8. | MligTC455_39612 | 861 | 17.93 | Mlig455_019206 | Neo: - Age: logFC(26M/2M)=-0.343 |
DLEC1 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_019206 {REF} {Length: 7152} {TRANSSPLICED} {Pfam: Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=68.8]; Flagellar-associated PapD-like [PF14874.8, score=25.0]} {Human: ENSG00000008226, DLEC1, DLEC1, cilia and flagella associated protein, [RH, Score=721, Expect=0.0]} {Mouse: ENSMUSG00000038060, Dlec1, deleted in lung and esophageal cancer 1, [RH, Score=725, Expect=0.0]} {Smed: dd_Smed_v6_10833_0_1, dd_Smed_v6_10833_0_1, [RH, Score=813, Expect=0.0]} {RNA1509_3454} {RNA1310_859.1, RNA1509_3454} {RNA1509_3454, RNA815_262} |
| 9. | MligTC455_44160 | 159 | 3.32 | Mlig455_054300 | Neo: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_054300 {REF} {Length: 1875} {Pfam: RAM signalling pathway protein [PF10428.11, score=19.5]} {RNA1509_25869, RNA1509_28395, RNA1509_50016} {RNA1310_9357.1, RNA1509_25869, RNA1509_50016} {RNA1509_25869, RNA1509_50016, RNA815_10341} | |
| 10. | MligTC455_18020 | 367 | 7.65 | Mlig455_069164 | Neo: - Age: - |
TMEM68 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_069164 {REF} {Length: 1616} {TRANSSPLICED} {Human: ENSG00000167904, TMEM68, transmembrane protein 68, [Score=122, Expect=3e-32]} {Mouse: ENSMUSG00000028232, Tmem68, transmembrane protein 68, [Score=116, Expect=2e-30]} {Dmel: FBgn0085377, CG34348, [Score=124, Expect=2e-33]} {Celegans: WBGene00021394, Y38C1AA.1, [Score=105, Expect=3e-26]} {Smed: dd_Smed_v6_13739_0_1, dd_Smed_v6_13739_0_1, [Score=98.2, Expect=4e-25]} {RNA1509_15918} {RNA1310_13548} {RNA815_46805} |
| 11. | MligTC455_17794 | 499 | 10.39 | Mlig455_058789 | Neo: - Age: Up-Down-Down |
0.95 | - | - | - | - | 0.950 | - | Mlig455_058789 {REF} {Length: 4801} {TRANSSPLICED} {Pfam: Double-stranded RNA binding motif [PF00035.28, score=25.2]} {RNA1509_18959} {RNA1310_1048.1} {RNA815_15809} | |
| 12. | MligTC455_26414 | 375 | 7.8 | Mlig455_001503 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_001503 {REF} {Length: 3655} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5580) [PF17743.3, score=85.6]} {Smed: dd_Smed_v6_9326_0_1, dd_Smed_v6_9326_0_1, [Score=167, Expect=1e-44]} {RNA1509_4141} {RNA1310_6622.2} {RNA815_8857} | |
| 13. | MligTC455_41932 | 115 | 2.39 | Mlig455_023267 | Neo: - Age: logFC(26M/2M)=-0.287 |
KIAA0825 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_023267 {REF} {Length: 4674} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4495) [PF14906.8, score=166.0]} {Human: ENSG00000185261, KIAA0825, KIAA0825, [RH, Score=127, Expect=9e-29]} {Mouse: ENSMUSG00000071252, 2210408I21Rik, RIKEN cDNA 2210408I21 gene, [RH, Score=122, Expect=2e-27]} {Dmel: FBgn0036859, CG14085, [Score=85.5, Expect=2e-16]} {Smed: dd_Smed_v6_9819_0_1, dd_Smed_v6_9819_0_1, [RH, Score=201, Expect=5e-52]} {RNA1509_22399} {RNA1310_1594.2} {RNA815_11157} |
Berezikov Lab - 2020-2021 © ERIBA