Data search
Results for MligTC455_28207
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28207 | 237 | 4.93 | Mlig455_021871 | Neo: - Age: - |
Mlig455_021871 {REF} {Length: 5277} {Smed: dd_Smed_v6_3783_0_4, dd_Smed_v6_3783_0_4, [Score=266, Expect=5e-74]} {RNA1509_10937} {RNA1310_1042.1} {RNA815_1808} |
Cumulative graph for MligTC455_28207
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.423 | 2.975 | 0.85893 | 1.00000 | |
| RegionR2 | 0.409 | 2.975 | 0.55485 | 0.91902 | |
| RegionR3 | -0.049 | 2.975 | 0.93516 | 1.00000 | |
| RegionR4 | 0.634 | 2.975 | 0.36339 | 0.68671 | |
| RegionR5 | -0.006 | 2.975 | 0.99870 | 1.00000 | |
| RegionR6 | 0.324 | 2.975 | 0.55454 | 1.00000 | |
| RegionR7 | 0.41 | 2.975 | 0.56693 | 1.00000 | |
| RegionR8 | -1.298 | 2.975 | 0.24550 | 0.86278 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.559 | 2.975 | 0.48646 | 1.00000 | |
| RegenerationR2 | 0.161 | 2.975 | 0.68916 | 0.95226 | |
| RegenerationR3 | -0.039 | 2.975 | 0.93430 | 1.00000 | |
| RegenerationR4 | -0.653 | 2.975 | 0.27334 | 0.71935 | |
| RegenerationR5 | -0.029 | 2.975 | 0.94773 | 1.00000 | |
| RegenerationR6 | -0.407 | 2.975 | 0.45232 | 0.77233 | |
| RegenerationBL | -0.362 | 2.975 | 0.69168 | 1.00000 | |
| RegenerationTP | -0.685 | 2.975 | 0.47763 | 0.88608 |
Genes with expression patterns similar to MligTC455_28207
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28207 | 237 | 4.93 | Mlig455_021871 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_021871 {REF} {Length: 5277} {Smed: dd_Smed_v6_3783_0_4, dd_Smed_v6_3783_0_4, [Score=266, Expect=5e-74]} {RNA1509_10937} {RNA1310_1042.1} {RNA815_1808} | |
| 2. | MligTC455_28208 | 284 | 5.92 | Mlig455_021874 | Neo: - Age: - |
4.858 | 0.993 | 0.979 | 0.989 | 0.995 | - | 0.902 | Mlig455_021874 {REF} {Length: 7459} {Smed: dd_Smed_v6_3783_0_1, dd_Smed_v6_3783_0_1, [RH, Score=428, Expect=5e-123]} {RNA1509_10937} {RNA1310_1042.1} {RNA815_1808} | |
| 3. | MligTC455_06968 | 170 | 3.55 | Mlig455_017040 | Neo: - Age: - Region-enriched R2: 2.918/0.04464 |
GPR179 | 1.888 | - | - | 0.981 | 0.907 | - | - | Mlig455_017040 {REF} {Length: 1289} {Human: ENSG00000276469, GPR179, G protein-coupled receptor 179, [Score=43.5, Expect=1e-05]; ENSG00000277399, GPR179, G protein-coupled receptor 179, [Score=43.5, Expect=1e-05]} {Mouse: ENSMUSG00000070337, Gpr179, G protein-coupled receptor 179, [Score=43.5, Expect=9e-06]} {Dmel: FBgn0051660, smog, [Score=80.5, Expect=6e-19]} {Celegans: WBGene00009558, F39B2.8, [Score=57.4, Expect=5e-11]} {Smed: dd_Smed_v6_8408_0_1, dd_Smed_v6_8408_0_1, [Score=70.9, Expect=7e-16]} {RNA1509_29274} {RNA1310_5195} {RNA815_2660} |
| 4. | MligTC455_34125 | 556 | 11.58 | Mlig455_049354 | Neo: - Age: - |
MPDZ | 1.814 | - | - | - | 0.841 | 0.973 | - | Mlig455_049354 {REF} {Length: 8195} {Pfam: PDZ domain [PF00595.26, score=481.5]; PDZ domain [PF17820.3, score=245.9]; PDZ domain [PF13180.8, score=160.6]; Family of unknown function (DUF6288) [PF19805.1, score=27.8]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [RH, Score=312, Expect=6e-85]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [RH, Score=308, Expect=8e-84]} {Dmel: FBgn0067864, Patj, [Score=244, Expect=1e-66]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=210, Expect=6e-54]} {Smed: dd_Smed_v6_5376_0_2, dd_Smed_v6_5376_0_2, [RH, Score=379, Expect=7e-106]} {RNA1509_52171} {RNA1310_2164} {RNA815_9270} |
| 5. | MligTC455_27908 | 252 | 5.24 | Mlig455_005661, Mlig455_022242 | Neo: - Age: logFC(26M/2M)=0.351 |
MAPK3 | 1.802 | - | - | - | 0.971 | 0.831 | - | Mlig455_005661 {REF} {Length: 585} {TRANSSPLICED} {RNA1310_116326} Mlig455_022242 {REF} {Length: 3697} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=86.4]} {Human: ENSG00000102882, MAPK3, mitogen-activated protein kinase 3, [Score=313, Expect=5e-108]; ENSG00000100030, MAPK1, mitogen-activated protein kinase 1, [Score=299, Expect=2e-101]} {Mouse: ENSMUSG00000063065, Mapk3, mitogen-activated protein kinase 3, [Score=314, Expect=4e-107]; ENSMUSG00000063358, Mapk1, mitogen-activated protein kinase 1, [Score=299, Expect=2e-101]} {Dmel: FBgn0003256, rl, rolled, [Score=285, Expect=1e-97]} {Celegans: WBGene00003401, mpk-1, Mitogen-activated protein kinase mpk-1, [Score=302, Expect=6e-103]} {Smed: dd_Smed_v6_9632_0_1, dd_Smed_v6_9632_0_1, [Score=309, Expect=7e-106]} {RNA1509_15152} {RNA1310_12000} {RNA815_16813} |
| 6. | MligTC455_18020 | 367 | 7.65 | Mlig455_069164 | Neo: - Age: - |
TMEM68 | 0.982 | - | - | - | - | 0.982 | - | Mlig455_069164 {REF} {Length: 1616} {TRANSSPLICED} {Human: ENSG00000167904, TMEM68, transmembrane protein 68, [Score=122, Expect=3e-32]} {Mouse: ENSMUSG00000028232, Tmem68, transmembrane protein 68, [Score=116, Expect=2e-30]} {Dmel: FBgn0085377, CG34348, [Score=124, Expect=2e-33]} {Celegans: WBGene00021394, Y38C1AA.1, [Score=105, Expect=3e-26]} {Smed: dd_Smed_v6_13739_0_1, dd_Smed_v6_13739_0_1, [Score=98.2, Expect=4e-25]} {RNA1509_15918} {RNA1310_13548} {RNA815_46805} |
| 7. | MligTC455_02027 | 203 | 4.23 | Mlig455_066314 | Neo: - Age: - |
0.966 | - | - | - | 0.966 | - | - | Mlig455_066314 {REF} {Length: 3851} {Smed: dd_Smed_v6_18815_0_1, dd_Smed_v6_18815_0_1, [RH, Score=76.6, Expect=2e-17]} {RNA1509_42694} {RNA1310_23631} {RNA815_7941.1} | |
| 8. | MligTC455_18570 | 1029 | 21.43 | Mlig455_053836, Mlig455_068506 | Neo: - Age: - |
TDG | 0.96 | - | - | - | - | 0.960 | - | Mlig455_053836 {REF} {Length: 3374} {TRANSSPLICED} {Pfam: Uracil DNA glycosylase superfamily [PF03167.21, score=61.7]} {Human: ENSG00000139372, TDG, thymine DNA glycosylase, [Score=200, Expect=6e-57]} {Mouse: ENSMUSG00000034674, Tdg, thymine DNA glycosylase, [Score=205, Expect=7e-59]} {Dmel: FBgn0026869, Thd1, [Score=249, Expect=3e-70]} {Smed: dd_Smed_v6_4053_0_1, dd_Smed_v6_4053_0_1, [RH, Score=342, Expect=2e-109]} {RNA1509_17434, RNA1509_31261} {RNA1310_4364, RNA1509_17434, RNA1509_31261} {RNA1509_17434, RNA1509_31261, RNA815_5870.1} Mlig455_068506 {REF} {Length: 3371} {TRANSSPLICED} {Pfam: Uracil DNA glycosylase superfamily [PF03167.21, score=61.6]} {Human: ENSG00000139372, TDG, thymine DNA glycosylase, [Score=200, Expect=4e-57]} {Mouse: ENSMUSG00000034674, Tdg, thymine DNA glycosylase, [Score=205, Expect=6e-59]} {Dmel: FBgn0026869, Thd1, [Score=250, Expect=3e-70]} {Smed: dd_Smed_v6_4053_0_1, dd_Smed_v6_4053_0_1, [RH, Score=343, Expect=1e-109]} {RNA1509_17434, RNA1509_44433} {RNA1310_4364, RNA1509_44433} {RNA1509_44433, RNA815_5870.1} |
| 9. | MligTC455_19002 | 593 | 12.36 | Mlig455_042636 | Neo: - Age: - |
RAB4A | 0.96 | - | - | - | 0.960 | - | - | Mlig455_042636 {REF} {Length: 3442} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=192.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=107.5]; ADP-ribosylation factor family [PF00025.23, score=46.0]; 50S ribosome-binding GTPase [PF01926.25, score=22.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=19.0]} {Human: ENSG00000168118, RAB4A, RAB4A, member RAS oncogene family, [RH, Score=315, Expect=1e-109]; ENSG00000167578, RAB4B, RAB4B, member RAS oncogene family, [RH, Score=310, Expect=8e-108]; ENSG00000171570, RAB4B-EGLN2, RAB4B-EGLN2 readthrough (NMD candidate), [RH, Score=310, Expect=8e-108]} {Mouse: ENSMUSG00000019478, Rab4a, RAB4A, member RAS oncogene family, [RH, Score=314, Expect=1e-109]; ENSMUSG00000053291, Rab4b, RAB4B, member RAS oncogene family, [RH, Score=310, Expect=5e-108]} {Dmel: FBgn0016701, Rab4, [RH, Score=308, Expect=1e-107]} {Celegans: WBGene00004276, rab-14, RAB family, [Score=247, Expect=1e-83]} {Smed: dd_Smed_v6_8106_0_1, dd_Smed_v6_8106_0_1, [RH, Score=257, Expect=2e-87]} {RNA1509_11473} {RNA1310_40054, RNA1509_11473} {RNA1509_11473, RNA815_18978} |
| 10. | MligTC455_45856 | 1272 | 26.49 | Mlig455_059174 | Neo: - Age: logFC(26M/2M)=-0.206 Region-enriched R2: 1.425/0.00231 |
SEMA5A | 0.959 | - | - | - | - | 0.959 | - | Mlig455_059174 {REF} {Length: 5250} {Pfam: Sema domain [PF01403.21, score=180.0]; Thrombospondin type 1 domain [PF00090.21, score=87.3]; Spondin-like TSP1 domain [PF19028.2, score=64.1]} {Human: ENSG00000112902, SEMA5A, semaphorin 5A, [RH, Score=346, Expect=1e-99]; ENSG00000082684, SEMA5B, semaphorin 5B, [RH, Score=342, Expect=1e-97]} {Mouse: ENSMUSG00000052133, Sema5b, sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B, [RH, Score=349, Expect=6e-101]} {Dmel: FBgn0284221, Sema5c, Semaphorin 5c, [RH, Score=315, Expect=4e-89]} {Celegans: WBGene00000082, adt-1, ADAMTS family; ADT-1, [Score=119, Expect=1e-26]} {Smed: dd_Smed_v6_1161_0_1, dd_Smed_v6_1161_0_1, [Score=159, Expect=5e-39]} {RNA1509_3299} {RNA1310_897, RNA1509_3299} {RNA1509_3299, RNA815_4837} |
| 11. | MligTC455_51424 | 3418 | 71.21 | Mlig455_021978 | Neo: - Age: - Regeneration-downregulated R2: -1.182 Regeneration-depleted R2: -1.182 |
CALM2 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_021978 {REF} {Length: 2208} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=141.5]; EF-hand domain pair [PF13499.8, score=125.9]; EF-hand domain pair [PF13833.8, score=108.2]; EF-hand domain [PF13405.8, score=98.7]; EF hand [PF13202.8, score=95.3]; EF-hand domain [PF14658.8, score=61.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=40.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.1]; EF-hand domain [PF08976.13, score=28.8]; Uncharacterised protein family (UPF0154) [PF03672.15, score=23.7]; Ca2+ insensitive EF hand [PF08726.12, score=21.4]; Dockerin type I domain [PF00404.20, score=21.1]; Caleosin related protein [PF05042.15, score=18.8]; Repeat of unknown function (DUF1103) [PF06513.13, score=18.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [RH, Score=295, Expect=2e-103]; ENSG00000198668, CALM1, calmodulin 1, [RH, Score=293, Expect=2e-103]; ENSG00000160014, CALM3, calmodulin 3, [RH, Score=291, Expect=2e-102]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [RH, Score=291, Expect=1e-102]; ENSMUSG00000036438, Calm2, calmodulin 2, [RH, Score=291, Expect=1e-102]; ENSMUSG00000001175, Calm1, calmodulin 1, [RH, Score=291, Expect=1e-102]} {Dmel: FBgn0000253, Cam, Calmodulin, [RH, Score=294, Expect=4e-104]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [RH, Score=295, Expect=1e-104]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [RH, Score=295, Expect=8e-105]} {RNA1509_10228, RNA1509_14586, RNA1509_22968} {RNA1310_22130, RNA1509_10228, RNA1509_14586, RNA1509_22968} {RNA1509_10228, RNA1509_14586, RNA1509_22968, RNA815_4214.1} |
| 12. | MligTC455_22568 | 756 | 15.74 | Mlig455_006710 | Neo: - Age: Up-Down-Down |
TRPM3 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_006710 {REF} {Length: 6137} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=107.2]; Ankyrin repeats (3 copies) [PF12796.9, score=92.9]; Ankyrin repeat [PF00023.32, score=63.3]; Ankyrin repeats (many copies) [PF13857.8, score=59.6]; Ankyrin repeat [PF13606.8, score=58.2]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=111, Expect=7e-24]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=111, Expect=5e-24]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=105, Expect=3e-22]} {Celegans: WBGene00001796, gtl-2, Gon-Two Like (TRP subfamily), [Score=64.3, Expect=6e-10]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=120, Expect=3e-27]} {RNA1509_12598} {RNA1310_943.1} {RNA815_2516.1} |
| 13. | MligTC455_18019 | 373 | 7.77 | Mlig455_045245 | Neo: - Age: - |
TMEM68 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_045245 {REF} {Length: 1902} {TRANSSPLICED} {Pfam: Acyltransferase [PF01553.23, score=39.9]; Diacylglycerol acyltransferase [PF03982.15, score=30.4]} {Human: ENSG00000167904, TMEM68, transmembrane protein 68, [RH, Score=247, Expect=2e-79]} {Mouse: ENSMUSG00000028232, Tmem68, transmembrane protein 68, [RH, Score=238, Expect=3e-76]} {Dmel: FBgn0085377, CG34348, [RH, Score=226, Expect=1e-71]} {Celegans: WBGene00021394, Y38C1AA.1, [RH, Score=222, Expect=2e-69]} {Smed: dd_Smed_v6_13739_0_1, dd_Smed_v6_13739_0_1, [RH, Score=146, Expect=6e-43]} {RNA1509_15918} {RNA1310_13548, RNA1509_15918} {RNA1509_15918, RNA815_36240} |
| 14. | MligTC455_34888 | 610 | 12.71 | Mlig455_059747 | Neo: - Age: Up-Down-Up |
PROM1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_059747 {REF} {Length: 5570} {TRANSSPLICED} {Pfam: Prominin [PF05478.13, score=235.9]; Predicted membrane protein (DUF2207) [PF09972.11, score=18.4]} {Human: ENSG00000007062, PROM1, prominin 1, [Score=103, Expect=8e-22]} {Mouse: ENSMUSG00000029086, Prom1, prominin 1, [RH, Score=144, Expect=9e-35]} {Smed: dd_Smed_v6_1386_0_1, dd_Smed_v6_1386_0_1, [RH, Score=158, Expect=5e-40]} {RNA1509_24546} {RNA1310_3366.1, RNA1509_24546} {RNA1509_24546, RNA815_11986.1} |
| 15. | MligTC455_36516 | 495 | 10.32 | Mlig455_032048 | Neo: - Age: - Regeneration-downregulated BL: -4.315 Regeneration-depleted BL: -4.315 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_032048 {REF} {Length: 2397} {TRANSSPLICED} {Smed: dd_Smed_v6_8694_0_1, dd_Smed_v6_8694_0_1, [RH, Score=74.7, Expect=7e-17]} {RNA1509_19681, RNA1509_42038} {RNA1310_1563, RNA1509_19681, RNA1509_42038} {RNA1509_19681, RNA1509_42038, RNA815_36419} | |
| 16. | MligTC455_44769 | 453 | 9.44 | Mlig455_038030 | Neo: - Age: Down-Up-Up |
0.951 | - | - | - | 0.951 | - | - | Mlig455_038030 {REF} {Length: 1156} {RNA1509_60104} {RNA1310_22354.2, RNA1509_60104} {RNA1509_60104, RNA815_11741.1} | |
| 17. | MligTC455_26817 | 353 | 7.36 | Mlig455_062943 | Neo: - Age: logFC(26M/2M)=-0.515 |
TTLL10 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_062943 {REF} {Length: 3909} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.8]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=69.7, Expect=2e-12]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=58.2, Expect=8e-09]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=87.4, Expect=9e-19]} {RNA1509_23478} {RNA1310_12709.1} {RNA815_2937} |
| 18. | MligTC455_44160 | 159 | 3.32 | Mlig455_054300 | Neo: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_054300 {REF} {Length: 1875} {Pfam: RAM signalling pathway protein [PF10428.11, score=19.5]} {RNA1509_25869, RNA1509_28395, RNA1509_50016} {RNA1310_9357.1, RNA1509_25869, RNA1509_50016} {RNA1509_25869, RNA1509_50016, RNA815_10341} |
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