TomoSeq data search

Data search

Results for MligTC455_51585

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_51585

883

18.39

Mlig455_039366

Neo: -

Age: -

Mlig455_039366 {REF} {Length: 816} {NoTransDecoderORF} {RNA1509_26995, RNA1509_32506} {RNA1310_12597, RNA1509_26995} {RNA1509_26995, RNA815_24849}

Cumulative graph for MligTC455_51585

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.333	4.399	0.06979	0.59267
RegionR2	-0.442	4.399	0.26957	0.65331
RegionR3	-0.59	4.399	0.08569	0.51748
RegionR4	0.38	4.399	0.33831	0.65781
RegionR5	0.189	4.399	0.53892	0.90215
RegionR6	0.219	4.399	0.50158	1.00000
RegionR7	-0.235	4.399	0.57256	1.00000
RegionR8	-0.853	4.399	0.11631	0.62937

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.906	4.399	0.08782	0.79439
RegenerationR2	-0.019	4.399	0.95843	1.00000
RegenerationR3	-0.353	4.399	0.39424	0.79877
RegenerationR4	-0.826	4.399	0.04697	0.34986
RegenerationR5	-0.514	4.399	0.17800	0.60676
RegenerationR6	-1	4.399	0.01820	0.16667
RegenerationBL	-1.992	4.399	0.00165	0.03190
RegenerationTP	-0.4	4.399	0.45018	0.86739

Genes with expression patterns similar to MligTC455_51585

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_51585	883	18.39	Mlig455_039366	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039366 {REF} {Length: 816} {NoTransDecoderORF} {RNA1509_26995, RNA1509_32506} {RNA1310_12597, RNA1509_26995} {RNA1509_26995, RNA815_24849}
2.	MligTC455_04187	261	5.45	Mlig455_041536	Neo: - Age: -	SLIT2	0.978	-	-	-	0.978	-	-	Mlig455_041536 {REF} {Length: 3233} {Pfam: EGF-like domain [PF00008.29, score=134.3]; Human growth factor-like EGF [PF12661.9, score=87.7]; Laminin G domain [PF00054.25, score=62.9]; Laminin G domain [PF02210.26, score=59.4]; Leucine rich repeat [PF13855.8, score=46.5]; EGF-like domain [PF07974.15, score=37.6]; EGF domain [PF12947.9, score=29.8]; Calcium-binding EGF domain [PF07645.17, score=25.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.3]} {Human: ENSG00000145147, SLIT2, slit guidance ligand 2, [Score=399, Expect=2e-122]} {Mouse: ENSMUSG00000031558, Slit2, slit guidance ligand 2, [Score=388, Expect=1e-118]; ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=373, Expect=4e-113]} {Dmel: FBgn0264089, sli, slit, [Score=480, Expect=8e-153]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=413, Expect=2e-128]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=482, Expect=2e-153]} {RNA1509_4387} {RNA1310_1314.1} {RNA815_367}
3.	MligTC455_38015	2996	62.41	Mlig455_003768, Mlig455_003780	Neo: - Age: Down-Down-Up	CFAP53	0.967	-	-	-	0.967	-	-	Mlig455_003768 {REF} {Length: 3258} {Pfam: Trichohyalin-plectin-homology domain [PF13868.8, score=77.0]} {Human: ENSG00000172361, CFAP53, cilia and flagella associated protein 53, [RH, Score=172, Expect=4e-47]} {Mouse: ENSMUSG00000035394, Cfap53, cilia and flagella associated protein 53, [RH, Score=164, Expect=2e-44]} {Smed: dd_Smed_v6_3219_0_1, dd_Smed_v6_3219_0_1, [RH, Score=302, Expect=7e-97]} {RNA1509_1100, RNA1509_19749, RNA1509_56592} {RNA1310_13648, RNA1509_19749, RNA1509_56592} {RNA1509_19749, RNA1509_56592, RNA815_5728} Mlig455_003780 {REF} {Length: 2775} {Pfam: Trichohyalin-plectin-homology domain [PF13868.8, score=76.3]} {Human: ENSG00000172361, CFAP53, cilia and flagella associated protein 53, [RH, Score=171, Expect=1e-46]} {Mouse: ENSMUSG00000035394, Cfap53, cilia and flagella associated protein 53, [RH, Score=166, Expect=1e-44]} {Smed: dd_Smed_v6_3219_0_1, dd_Smed_v6_3219_0_1, [RH, Score=302, Expect=9e-97]} {RNA1509_1100, RNA1509_14187} {RNA1310_13648, RNA1509_14187} {RNA1509_14187, RNA815_5728}
4.	MligTC455_18478	1684	35.08	Mlig455_032130	Neo: - Age: logFC(26M/2M)=-0.293 Region-enriched R3: 1.022/0.01472		0.966	-	-	-	0.966	-	-	Mlig455_032130 {REF} {Length: 4061} {TRANSSPLICED} {Pfam: Acyltransferase family [PF01757.24, score=88.4]; Nose resistant-to-fluoxetine protein, N-terminal domain [PF20146.1, score=67.8]} {Mouse: ENSMUSG00000046610, Oacyl, O-acyltransferase like, [RH, Score=178, Expect=1e-46]} {Dmel: FBgn0052645, CG32645, [RH, Score=279, Expect=2e-81]} {Celegans: WBGene00003813, nrf-6, Nose resistant to fluoxetine protein 6, [RH, Score=261, Expect=2e-75]} {RNA1509_12559, RNA1509_21198, RNA1509_5690} {RNA1310_4250.1, RNA1509_12559, RNA1509_21198, RNA1509_5690} {RNA1509_12559, RNA1509_21198, RNA1509_5690, RNA815_5869}
5.	MligTC455_28338	193	4.02	Mlig455_044812	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.746	ITCH	0.956	-	-	-	-	-	0.956	Mlig455_044812 {REF} {Length: 4500} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=296.3]; WW domain [PF00397.28, score=92.0]; C2 domain [PF00168.32, score=40.0]} {Human: ENSG00000078747, ITCH, itchy E3 ubiquitin protein ligase, [Score=590, Expect=0.0]; ENSG00000198373, WWP2, WW domain containing E3 ubiquitin protein ligase 2, [Score=584, Expect=0.0]; ENSG00000123124, WWP1, WW domain containing E3 ubiquitin protein ligase 1, [Score=580, Expect=0.0]} {Mouse: ENSMUSG00000027598, Itch, itchy, E3 ubiquitin protein ligase, [Score=589, Expect=0.0]; ENSMUSG00000031930, Wwp2, WW domain containing E3 ubiquitin protein ligase 2, [Score=585, Expect=0.0]; ENSMUSG00000041058, Wwp1, WW domain containing E3 ubiquitin protein ligase 1, [Score=579, Expect=0.0]} {Dmel: FBgn0003557, Su(dx), Suppressor of deltex, [Score=551, Expect=0.0]} {Celegans: WBGene00007009, wwp-1, E3 ubiquitin-protein ligase, [Score=576, Expect=0.0]} {Smed: dd_Smed_v6_7779_0_1, dd_Smed_v6_7779_0_1, [Score=572, Expect=0.0]} {RNA1509_12682} {RNA1310_9181} {RNA815_13641}

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