M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_38015

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38015 2996 62.41 Mlig455_003768, Mlig455_003780

Neo: -

Age: Down-Down-Up

 CFAP53

Mlig455_003768 {REF} {Length: 3258} {Pfam: Trichohyalin-plectin-homology domain [PF13868.8, score=77.0]} {Human: ENSG00000172361, CFAP53, cilia and flagella associated protein 53, [RH, Score=172, Expect=4e-47]} {Mouse: ENSMUSG00000035394, Cfap53, cilia and flagella associated protein 53, [RH, Score=164, Expect=2e-44]} {Smed: dd_Smed_v6_3219_0_1, dd_Smed_v6_3219_0_1, [RH, Score=302, Expect=7e-97]} {RNA1509_1100, RNA1509_19749, RNA1509_56592} {RNA1310_13648, RNA1509_19749, RNA1509_56592} {RNA1509_19749, RNA1509_56592, RNA815_5728}

Mlig455_003780 {REF} {Length: 2775} {Pfam: Trichohyalin-plectin-homology domain [PF13868.8, score=76.3]} {Human: ENSG00000172361, CFAP53, cilia and flagella associated protein 53, [RH, Score=171, Expect=1e-46]} {Mouse: ENSMUSG00000035394, Cfap53, cilia and flagella associated protein 53, [RH, Score=166, Expect=1e-44]} {Smed: dd_Smed_v6_3219_0_1, dd_Smed_v6_3219_0_1, [RH, Score=302, Expect=9e-97]} {RNA1509_1100, RNA1509_14187} {RNA1310_13648, RNA1509_14187} {RNA1509_14187, RNA815_5728}

Cumulative graph for MligTC455_38015

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.056 6.113 0.92834 1.00000
RegionR2 0.83 6.113 0.03047 0.19761
RegionR3 0.973 6.113 0.00235 0.05596
RegionR4 -0.11 6.113 0.77420 1.00000
RegionR5 -0.387 6.113 0.23283 0.54046
RegionR6 -0.043 6.113 0.89587 1.00000
RegionR7 -1.464 6.113 0.00026 0.01205
RegionR8 0.257 6.113 0.50969 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.478 6.113 0.17600 0.91826
RegenerationR2 0.513 6.113 0.17988 0.62242
RegenerationR3 -0.314 6.113 0.43800 0.82584
RegenerationR4 0.256 6.113 0.54973 0.89271
RegenerationR5 0.147 6.113 0.71865 0.95891
RegenerationR6 -0.042 6.113 0.92263 1.00000
RegenerationBL -1.521 6.113 0.00342 0.05103
RegenerationTP 0.54 6.113 0.23188 0.67706


Genes with expression patterns similar to MligTC455_38015

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38015 2996 62.41 Mlig455_003768, Mlig455_003780

Neo: -

Age: Down-Down-Up

 CFAP53 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_003768 {REF} {Length: 3258} {Pfam: Trichohyalin-plectin-homology domain [PF13868.8, score=77.0]} {Human: ENSG00000172361, CFAP53, cilia and flagella associated protein 53, [RH, Score=172, Expect=4e-47]} {Mouse: ENSMUSG00000035394, Cfap53, cilia and flagella associated protein 53, [RH, Score=164, Expect=2e-44]} {Smed: dd_Smed_v6_3219_0_1, dd_Smed_v6_3219_0_1, [RH, Score=302, Expect=7e-97]} {RNA1509_1100, RNA1509_19749, RNA1509_56592} {RNA1310_13648, RNA1509_19749, RNA1509_56592} {RNA1509_19749, RNA1509_56592, RNA815_5728}

Mlig455_003780 {REF} {Length: 2775} {Pfam: Trichohyalin-plectin-homology domain [PF13868.8, score=76.3]} {Human: ENSG00000172361, CFAP53, cilia and flagella associated protein 53, [RH, Score=171, Expect=1e-46]} {Mouse: ENSMUSG00000035394, Cfap53, cilia and flagella associated protein 53, [RH, Score=166, Expect=1e-44]} {Smed: dd_Smed_v6_3219_0_1, dd_Smed_v6_3219_0_1, [RH, Score=302, Expect=9e-97]} {RNA1509_1100, RNA1509_14187} {RNA1310_13648, RNA1509_14187} {RNA1509_14187, RNA815_5728}
2. MligTC455_38918 3484 72.59 Mlig455_016984

Neo: -

Age: -

 SPAG17 2.488 - 0.727 - 0.807 - 0.954 Mlig455_016984 {REF} {Length: 7773} {Human: ENSG00000155761, SPAG17, sperm associated antigen 17, [Score=555, Expect=8e-162]} {Mouse: ENSMUSG00000027867, Spag17, sperm associated antigen 17, [Score=283, Expect=3e-76]} {Celegans: WBGene00015646, mlt-10, [RH, Score=177, Expect=1e-45]} {Smed: dd_Smed_v6_9301_0_1, dd_Smed_v6_9301_0_1, [Score=543, Expect=8e-159]} {RNA1509_1598} {RNA1310_263.1} {RNA815_1526.1}
3. MligTC455_26739 3280 68.34 Mlig455_067098

Neo: -

Age: Down-Down-Up

 1.802 - - - 0.957 - 0.845 Mlig455_067098 {REF} {Length: 1983} {Smed: dd_Smed_v6_72295_0_1, dd_Smed_v6_72295_0_1, [Score=46.6, Expect=1e-07]} {RNA1509_11235, RNA1509_2622} {RNA1310_26071.1, RNA1509_11235, RNA1509_2622} {RNA1509_11235, RNA1509_2622, RNA815_17554}
4. MligTC455_12669 49 1.03 Mlig455_020384

Neo: -

Age: -

 1.761 - - - - 0.952 0.809 Mlig455_020384 {REF} {Length: 240} {RNA1310_94238}
5. MligTC455_23565 3404 70.91 Mlig455_028825, Mlig455_028842

Neo: -

Age: logFC(26M/2M)=-0.382

 1.74 - - - - 0.787 0.953

Mlig455_028825 {REF} {Length: 4003} {TRANSSPLICED} {Smed: dd_Smed_v6_10823_0_2, dd_Smed_v6_10823_0_2, [Score=78.6, Expect=3e-15]} {RNA1509_2318} {RNA1310_2438.1} {RNA815_699}

Mlig455_028842 {REF} {Length: 3964} {TRANSSPLICED} {Pfam: Autophagy protein 16 (ATG16) [PF08614.13, score=19.8]} {Smed: dd_Smed_v6_10823_0_1, dd_Smed_v6_10823_0_1, [RH, Score=195, Expect=2e-50]} {RNA1509_2318} {RNA1310_2438.1, RNA1509_2318} {RNA1509_2318, RNA815_699}
6. MligTC455_18478 1684 35.08 Mlig455_032130

Neo: -

Age: logFC(26M/2M)=-0.293

Region-enriched R3: 1.022/0.01472

 1.69 - - - 0.979 0.711 - Mlig455_032130 {REF} {Length: 4061} {TRANSSPLICED} {Pfam: Acyltransferase family [PF01757.24, score=88.4]; Nose resistant-to-fluoxetine protein, N-terminal domain [PF20146.1, score=67.8]} {Mouse: ENSMUSG00000046610, Oacyl, O-acyltransferase like, [RH, Score=178, Expect=1e-46]} {Dmel: FBgn0052645, CG32645, [RH, Score=279, Expect=2e-81]} {Celegans: WBGene00003813, nrf-6, Nose resistant to fluoxetine protein 6, [RH, Score=261, Expect=2e-75]} {RNA1509_12559, RNA1509_21198, RNA1509_5690} {RNA1310_4250.1, RNA1509_12559, RNA1509_21198, RNA1509_5690} {RNA1509_12559, RNA1509_21198, RNA1509_5690, RNA815_5869}
7. MligTC455_48833 702 14.62 Mlig455_006923, Mlig455_017937

Neo: -

Age: -

Region-enriched R5: 1.677/0.02053

 RNF2 0.972 - - - - 0.972 -

Mlig455_006923 {REF} {Length: 2956} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=53.5]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Ring finger domain [PF13639.8, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.2]; RING-type zinc-finger [PF13445.8, score=22.4]; zinc-RING finger domain [PF14634.8, score=20.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=19.4]} {Human: ENSG00000121481, RNF2, ring finger protein 2, [RH, Score=252, Expect=1e-80]} {Mouse: ENSMUSG00000026484, Rnf2, ring finger protein 2, [RH, Score=252, Expect=9e-81]; ENSMUSG00000024325, Ring1, ring finger protein 1, [RH, Score=242, Expect=6e-76]} {Dmel: FBgn0003330, Sce, Sex combs extra, [RH, Score=226, Expect=9e-70]} {Celegans: WBGene00020496, spat-3, Suppressor of PAr-Two defect, [RH, Score=82.8, Expect=9e-17]} {Smed: dd_Smed_v6_8989_0_1, dd_Smed_v6_8989_0_1, [RH, Score=191, Expect=2e-56]} {RNA1509_26957} {RNA1310_17990, RNA1509_26957} {RNA1509_26957, RNA815_16348}

Mlig455_017937 {REF} {Length: 2921} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=53.5]; RAWUL domain RING finger- and WD40-associated ubiquitin-like [PF16207.7, score=40.8]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=35.9]; Ring finger domain [PF13639.8, score=32.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.2]; RING-type zinc-finger [PF13445.8, score=22.4]; zinc-RING finger domain [PF14634.8, score=20.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=20.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=19.4]} {Human: ENSG00000121481, RNF2, ring finger protein 2, [RH, Score=252, Expect=1e-80]} {Mouse: ENSMUSG00000026484, Rnf2, ring finger protein 2, [RH, Score=252, Expect=9e-81]; ENSMUSG00000024325, Ring1, ring finger protein 1, [RH, Score=242, Expect=6e-76]} {Dmel: FBgn0003330, Sce, Sex combs extra, [RH, Score=226, Expect=9e-70]} {Celegans: WBGene00020496, spat-3, Suppressor of PAr-Two defect, [RH, Score=82.8, Expect=9e-17]} {Smed: dd_Smed_v6_8989_0_1, dd_Smed_v6_8989_0_1, [RH, Score=191, Expect=2e-56]} {RNA1509_26957} {RNA1310_17990} {RNA815_16348}
8. MligTC455_51585 883 18.39 Mlig455_039366

Neo: -

Age: -

 0.967 - - - 0.967 - - Mlig455_039366 {REF} {Length: 816} {NoTransDecoderORF} {RNA1509_26995, RNA1509_32506} {RNA1310_12597, RNA1509_26995} {RNA1509_26995, RNA815_24849}
9. MligTC455_43365 157 3.27 Mlig455_019023

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.352

 TNN 0.961 - - - - 0.961 - Mlig455_019023 {REF} {Length: 2388} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=106.4]} {Human: ENSG00000120332, TNN, tenascin N, [Score=92.4, Expect=2e-20]; ENSG00000229353, TNXB, tenascin XB, [Score=91.3, Expect=7e-20]; ENSG00000166482, MFAP4, microfibril associated protein 4, [Score=91.3, Expect=5e-21]; ENSG00000236236, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000206258, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000233323, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000231608, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000168477, TNXB, tenascin XB, [Score=90.5, Expect=1e-19]; ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=88.6, Expect=1e-19]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=92.0, Expect=2e-20]; ENSMUSG00000033327, Tnxb, tenascin XB, [Score=91.3, Expect=4e-20]; ENSMUSG00000042436, Mfap4, microfibrillar-associated protein 4, [Score=88.6, Expect=2e-20]} {Dmel: FBgn0003326, sca, scabrous, [Score=85.5, Expect=2e-18]} {Celegans: WBGene00020516, T15B7.1, [Score=52.8, Expect=1e-07]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=43.5, Expect=1e-05]} {RNA1509_25852} {RNA1310_16471.3, RNA1509_25852} {RNA1509_25852, RNA815_7229.1}
10. MligTC455_07847 1096 22.84 Mlig455_012556, Mlig455_012557, Mlig455_012561

Neo: -

Age: Down-Up-Down

 FRK, LCK, YES1 0.959 - - - - 0.959 -

Mlig455_012556 {REF} {Length: 708} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=259.4]; Protein kinase domain [PF00069.27, score=135.8]; Haspin like kinase domain [PF12330.10, score=20.1]; Kinase-like [PF14531.8, score=18.9]} {Human: ENSG00000111816, FRK, fyn related Src family tyrosine kinase, [Score=229, Expect=3e-72]; ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=218, Expect=8e-68]; ENSG00000254087, LYN, LYN proto-oncogene, Src family tyrosine kinase, [Score=218, Expect=1e-67]} {Mouse: ENSMUSG00000019779, Frk, fyn-related kinase, [Score=223, Expect=9e-70]; ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [Score=218, Expect=2e-68]; ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=217, Expect=9e-68]; ENSMUSG00000014932, Yes1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=216, Expect=8e-67]; ENSMUSG00000027646, Src, Rous sarcoma oncogene, [Score=215, Expect=1e-66]; ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=214, Expect=1e-66]; ENSMUSG00000003283, Hck, hemopoietic cell kinase, [Score=213, Expect=3e-66]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=238, Expect=6e-76]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=237, Expect=7e-76]} {Smed: dd_Smed_v6_3363_0_2, dd_Smed_v6_3363_0_2, [Score=257, Expect=9e-84]} {RNA1509_39741} {RNA1310_36414} {RNA815_3276.1}

Mlig455_012557 {REF} {Length: 2434} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=283.3]; Protein kinase domain [PF00069.27, score=161.5]; SH3 domain [PF00018.30, score=49.1]; SH2 domain [PF00017.26, score=47.6]; Variant SH3 domain [PF07653.19, score=34.0]; Variant SH3 domain [PF14604.8, score=29.9]; ABC1 atypical kinase-like domain [PF03109.18, score=22.5]; Haspin like kinase domain [PF12330.10, score=19.3]} {Human: ENSG00000182866, LCK, LCK proto-oncogene, Src family tyrosine kinase, [Score=371, Expect=1e-122]; ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=366, Expect=1e-120]; ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=359, Expect=9e-118]; ENSG00000254087, LYN, LYN proto-oncogene, Src family tyrosine kinase, [Score=358, Expect=6e-118]; ENSG00000176105, YES1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=358, Expect=4e-117]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [Score=354, Expect=7e-116]} {Mouse: ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=374, Expect=9e-124]; ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [Score=362, Expect=2e-119]; ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=360, Expect=5e-118]; ENSMUSG00000003283, Hck, hemopoietic cell kinase, [Score=358, Expect=6e-118]; ENSMUSG00000014932, Yes1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=357, Expect=3e-117]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=376, Expect=1e-124]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=374, Expect=8e-125]} {Smed: dd_Smed_v6_3363_0_1, dd_Smed_v6_3363_0_1, [Score=456, Expect=8e-157]} {RNA1509_27796, RNA1509_39741, RNA1509_58341} {RNA1310_9777, RNA1509_39741, RNA1509_58341} {RNA1509_39741, RNA1509_58341, RNA815_3276.1}

Mlig455_012561 {REF} {Length: 2422} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=153.7]; Protein kinase domain [PF00069.27, score=86.2]; Haspin like kinase domain [PF12330.10, score=20.3]; Kinase-like [PF14531.8, score=19.7]} {Human: ENSG00000176105, YES1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=139, Expect=1e-39]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [Score=137, Expect=6e-39]; ENSG00000182866, LCK, LCK proto-oncogene, Src family tyrosine kinase, [Score=137, Expect=9e-39]; ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=136, Expect=1e-38]; ENSG00000000938, FGR, FGR proto-oncogene, Src family tyrosine kinase, [Score=136, Expect=1e-38]; ENSG00000254087, LYN, LYN proto-oncogene, Src family tyrosine kinase, [Score=134, Expect=6e-38]} {Mouse: ENSMUSG00000014932, Yes1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=139, Expect=1e-39]; ENSMUSG00000028874, Fgr, FGR proto-oncogene, Src family tyrosine kinase, [Score=139, Expect=1e-39]; ENSMUSG00000027646, Src, Rous sarcoma oncogene, [Score=137, Expect=5e-39]; ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=136, Expect=8e-39]; ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=136, Expect=9e-39]; ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [Score=134, Expect=4e-38]; ENSMUSG00000027579, Srms, src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites, [Score=134, Expect=6e-38]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=140, Expect=2e-39]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=135, Expect=3e-41]} {Smed: dd_Smed_v6_3147_0_1, dd_Smed_v6_3147_0_1, [Score=143, Expect=1e-41]} {RNA1509_27796} {RNA1310_9777} {RNA815_3276.1}
11. MligTC455_18523 377 7.85 Mlig455_041280

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.516

 ZNRF2 0.957 - - - - 0.957 - Mlig455_041280 {REF} {Length: 3365} {Pfam: Ring finger domain [PF13639.8, score=35.5]; RING-like zinc finger [PF17123.7, score=21.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.4]} {Human: ENSG00000180233, ZNRF2, zinc and ring finger 2, [RH, Score=149, Expect=8e-44]; ENSG00000186187, ZNRF1, zinc and ring finger 1, [RH, Score=143, Expect=1e-41]} {Mouse: ENSMUSG00000058446, Znrf2, zinc and ring finger 2, [RH, Score=151, Expect=4e-45]} {Dmel: FBgn0029911, CG14435, [RH, Score=154, Expect=2e-45]} {Celegans: WBGene00022115, Y71F9AL.10, [RH, Score=139, Expect=3e-41]} {Smed: dd_Smed_v6_2436_0_1, dd_Smed_v6_2436_0_1, [RH, Score=134, Expect=7e-39]} {RNA1509_22680} {RNA1310_29925} {RNA815_18349}
12. MligTC455_23866 384 8.01 Mlig455_002342

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.442

Region-enriched R5: 1.898/0.04942

 MARS2 0.956 - - - - 0.956 - Mlig455_002342 {REF} {Length: 2569} {TRANSSPLICED} {Pfam: tRNA synthetases class I (M) [PF09334.13, score=211.4]; tRNA synthetases class I (I, L, M and V) [PF00133.24, score=33.0]; Anticodon binding domain of methionyl tRNA ligase [PF19303.1, score=19.0]} {Human: ENSG00000247626, MARS2, methionyl-tRNA synthetase 2, mitochondrial, [Score=301, Expect=7e-95]} {Mouse: ENSMUSG00000046994, Mars2, methionine-tRNA synthetase 2 (mitochondrial), [Score=291, Expect=2e-91]} {Dmel: FBgn0027083, MetRS-m, Methionyl-tRNA synthetase, mitochondrial, [Score=310, Expect=6e-99]} {Celegans: WBGene00013678, Y105E8A.20, Methionyl-tRNA synthetase (Mitochondrial), [Score=291, Expect=3e-92]} {Smed: dd_Smed_v6_12525_0_2, dd_Smed_v6_12525_0_2, [Score=276, Expect=1e-86]} {RNA1509_34702} {RNA1310_17351} {RNA815_6878}
13. MligTC455_45546 2857 59.52 Mlig455_000034, Mlig455_023497, Mlig455_042422, Mlig455_050366, Mlig455_059624

Neo: -

Age: Down-Up-Down

 0.956 - - - - 0.956 -

Mlig455_000034 {REF} {Length: 356} {TRANSSPLICED} {RNA1509_43103} {RNA1310_27460} {RNA815_26067.1}

Mlig455_023497 {REF} {Length: 471} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43103} {RNA1310_45665} {RNA815_26067.1}

Mlig455_042422 {REF} {Length: 357} {TRANSSPLICED} {RNA1509_43103} {RNA1310_45665} {RNA815_26067.1}

Mlig455_050366 {REF} {Length: 357} {TRANSSPLICED} {RNA1509_43103} {RNA1310_45665} {RNA815_26067.1}

Mlig455_059624 {REF} {Length: 931} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_14354, RNA1509_35446, RNA1509_43103} {RNA1310_27460, RNA1509_14354, RNA1509_35446, RNA1509_43103} {RNA1509_14354, RNA1509_35446, RNA1509_43103, RNA815_26067.1}
14. MligTC455_39270 44 0.92 Mlig455_031895

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_031895 {REF} {Length: 1332} {Pfam: Adenovirus endoprotease [PF00770.20, score=20.9]} {RNA1509_37388} {RNA1310_436.1} {RNA815_24633}
15. MligTC455_03407 252 5.24 Mlig455_019139

Neo: -

Age: -

Region-enriched R2: 2.707/0.00555

 0.953 - - - - 0.953 - Mlig455_019139 {REF} {Length: 1926} {Pfam: Phospholipid-translocating P-type ATPase C-terminal [PF16212.7, score=20.7]} {Smed: dd_Smed_v6_10670_0_1, dd_Smed_v6_10670_0_1, [Score=48.1, Expect=2e-06]} {RNA1509_53106} {RNA1310_2065} {RNA815_1499}
16. MligTC455_29580 523 10.89 Mlig455_004620, Mlig455_004629, Mlig455_004656

Neo: -

Age: -

Region-enriched R8: 2.467/0.03081
Region-enriched R7: 2.313/0.00806

 AP1S2 0.953 - - - - 0.953 -

Mlig455_004620 {REF} {Length: 2855} {TRANSSPLICED} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=193.9]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=261, Expect=2e-90]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=252, Expect=5e-87]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=261, Expect=1e-90]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=252, Expect=3e-87]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [RH, Score=282, Expect=3e-99]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [RH, Score=278, Expect=9e-98]} {Smed: dd_Smed_v6_2365_0_1, dd_Smed_v6_2365_0_1, [RH, Score=274, Expect=5e-96]} {RNA1509_14918} {RNA1310_4459.1} {RNA815_4627}

Mlig455_004629 {REF} {Length: 2802} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=193.6]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=269, Expect=2e-93]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=263, Expect=3e-91]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=269, Expect=1e-93]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=263, Expect=2e-91]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [RH, Score=262, Expect=4e-91]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=256, Expect=1e-88]} {Smed: dd_Smed_v6_9393_0_2, dd_Smed_v6_9393_0_2, [RH, Score=262, Expect=3e-91]} {RNA1509_14918} {RNA1310_4459.1} {RNA815_3355.1}

Mlig455_004656 {REF} {Length: 1887} {TRANSSPLICED} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=193.6]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=270, Expect=7e-94]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=263, Expect=6e-91]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=270, Expect=5e-94]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=263, Expect=4e-91]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [RH, Score=262, Expect=3e-91]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=256, Expect=8e-89]} {Smed: dd_Smed_v6_9393_0_2, dd_Smed_v6_9393_0_2, [RH, Score=263, Expect=1e-91]} {RNA1509_14918} {RNA1310_7376.1} {RNA815_4627}
17. MligTC455_25753 134 2.8 Mlig455_040394

Neo: -

Age: Up-Down-Up

Region-enriched R4: 2.927/0.00231
Region-enriched R3: 2.740/0.00674

 0.952 - - - - 0.952 - Mlig455_040394 {REF} {Length: 5965} {RNA1509_5734} {RNA1310_64234} {RNA815_32443}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA