Data search


search
Exact
Search

Results for MligTC455_51795

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51795 223 4.65 Mlig455_025595, Mlig455_052898

Neo: -

Age: Down-Down-Up

Mlig455_025595 {REF} {Length: 924} {TRANSSPLICED} {RNA1509_31318} {RNA1310_75729} {RNA815_39211}

Mlig455_052898 {REF} {Length: 984} {TRANSSPLICED} {RNA1509_31318} {RNA1310_75729} {RNA815_39211}

Cumulative graph for MligTC455_51795

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.26 2.813 0.87020 1.00000
RegionR2 0.771 2.813 0.33573 0.72758
RegionR3 0.438 2.813 0.46538 0.97326
RegionR4 -0.429 2.813 0.58408 0.89989
RegionR5 -0.472 2.813 0.38211 0.73674
RegionR6 -0.681 2.813 0.30372 0.89484
RegionR7 -1.027 2.813 0.32980 0.96493
RegionR8 1.141 2.813 0.22299 0.83071

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.091 2.813 0.36612 1.00000
RegenerationR2 -0.477 2.813 0.49575 0.86962
RegenerationR3 -0.271 2.813 0.72936 0.95749
RegenerationR4 0.106 2.813 0.89095 1.00000
RegenerationR5 -0.677 2.813 0.34987 0.76455
RegenerationR6 0.991 2.813 0.20711 0.54999
RegenerationBL -0.032 2.813 0.96823 1.00000
RegenerationTP 1.943 2.813 0.03021 0.29187


Genes with expression patterns similar to MligTC455_51795

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51795 223 4.65 Mlig455_025595, Mlig455_052898

Neo: -

Age: Down-Down-Up

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_025595 {REF} {Length: 924} {TRANSSPLICED} {RNA1509_31318} {RNA1310_75729} {RNA815_39211}

Mlig455_052898 {REF} {Length: 984} {TRANSSPLICED} {RNA1509_31318} {RNA1310_75729} {RNA815_39211}
2. MligTC455_16635 52 1.07 Mlig455_045243, Mlig455_069161

Neo: -

Age: -

1.781 - - 0.951 0.830 - -

Mlig455_045243 {REF} {Length: 679} {NoTransDecoderORF} {RNA1310_83936} {RNA815_48141}

Mlig455_069161 {REF} {Length: 1383} {NoTransDecoderORF} {RNA1509_25000} {RNA1310_83936} {RNA815_48141}
3. MligTC455_32515 262 5.45 Mlig455_052102

Neo: -

Age: Up-Down-Down

RNFT2 1.769 - - - 0.817 0.952 - Mlig455_052102 {REF} {Length: 2229} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=26.8]; RING-H2 zinc finger domain [PF12678.9, score=26.2]; Ring finger domain [PF13639.8, score=25.7]; zinc-RING finger domain [PF14634.8, score=24.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.2]; RING-type zinc-finger [PF13445.8, score=19.0]} {Human: ENSG00000135119, RNFT2, ring finger protein, transmembrane 2, [Score=81.6, Expect=1e-16]} {Mouse: ENSMUSG00000032850, Rnft2, ring finger protein, transmembrane 2, [Score=80.9, Expect=2e-16]} {Celegans: WBGene00022502, ZC13.1, [Score=50.1, Expect=1e-06]} {RNA1509_39112, RNA1509_52203, RNA1509_53909} {RNA1310_18608, RNA1509_39112, RNA1509_52203, RNA1509_53909} {RNA1509_39112, RNA1509_52203, RNA1509_53909, RNA815_11999}
4. MligTC455_53734 59 1.23 Mlig455_055711

Neo: -

Age: -

1.751 - - 0.959 - - 0.792 Mlig455_055711 {REF} {Length: 2272} {RNA1509_48475} {RNA1310_18466} {RNA815_22605}
5. MligTC455_16060 22 0.47 Mlig455_044243

Neo: -

Age: Down-Up-Down

CFAP157 0.976 - - 0.976 - - - Mlig455_044243 {REF} {Length: 2694} {TRANSSPLICED} {Pfam: Siphovirus Gp157 [PF05565.13, score=20.7]; Protein of unknown function, DUF573 [PF04504.16, score=20.6]} {Human: ENSG00000160401, CFAP157, cilia and flagella associated protein 157, [Score=106, Expect=5e-24]} {Mouse: ENSMUSG00000038987, Cfap157, cilia and flagella associated protein 157, [Score=110, Expect=3e-25]} {Dmel: FBgn0036962, CG17122, [Score=67.8, Expect=1e-11]} {Smed: dd_Smed_v6_11523_0_1, dd_Smed_v6_11523_0_1, [Score=60.8, Expect=1e-09]} {RNA1509_42697} {RNA1310_10711, RNA1509_42697} {RNA1509_42697, RNA815_24261}
6. MligTC455_12543 28 0.59 Mlig455_022741

Neo: -

Age: -

0.975 - - 0.975 - - - Mlig455_022741 {REF} {Length: 665} {NoTransDecoderORF}
7. MligTC455_37945 128 2.66 Mlig455_050331

Neo: -

Age: Down-Up-Down

0.961 - - 0.961 - - - Mlig455_050331 {REF} {Length: 4704} {TRANSSPLICED} {RNA1509_35022, RNA1509_59283} {RNA1310_6390.1, RNA1509_35022, RNA1509_59283} {RNA1509_35022, RNA1509_59283, RNA815_7453}
8. MligTC455_12982 36 0.75 Mlig455_006422

Neo: -

Age: -

0.96 - - 0.960 - - - Mlig455_006422 {REF} {Length: 2640} {RNA1509_54360} {RNA1310_27673} {RNA815_16736}
9. MligTC455_17519 249 5.19 Mlig455_060142

Neo: -

Age: logFC(26M/2M)=-0.833

ARIH2 0.958 - - - 0.958 - - Mlig455_060142 {REF} {Length: 6659} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=49.5]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=35.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.0]; RING-type zinc-finger [PF13445.8, score=20.9]; Ring finger domain [PF13639.8, score=20.0]; zinc-RING finger domain [PF14634.8, score=19.1]} {Human: ENSG00000177479, ARIH2, ariadne RBR E3 ubiquitin protein ligase 2, [Score=96.7, Expect=4e-20]; ENSG00000116514, RNF19B, ring finger protein 19B, [Score=93.2, Expect=1e-18]} {Mouse: ENSMUSG00000064145, Arih2, ariadne RBR E3 ubiquitin protein ligase 2, [Score=95.1, Expect=7e-20]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=106, Expect=1e-23]} {Celegans: WBGene00020462, T12E12.1, Potential E3 ubiquitin-protein ligase ariadne-2, [Score=84.3, Expect=1e-16]} {Smed: dd_Smed_v6_4224_0_1, dd_Smed_v6_4224_0_1, [Score=90.5, Expect=1e-18]} {RNA1509_50608} {RNA1310_864.1} {RNA815_215}
10. MligTC455_07324 33 0.69 Mlig455_027151

Neo: -

Age: Up-Down-Down

0.956 - - 0.956 - - - Mlig455_027151 {REF} {Length: 4978} {RNA1509_58516} {RNA1310_40818} {RNA815_42071}
11. MligTC455_32568 159 3.3 Mlig455_004414, Mlig455_037235, Mlig455_037247

Neo: -

Age: Up-Down-Up

IRAK4, TESK2 0.955 - - 0.955 - - -

Mlig455_004414 {REF} {Length: 5411} {Pfam: Protein kinase domain [PF00069.27, score=130.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=108.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.6]} {Human: ENSG00000198001, IRAK4, interleukin 1 receptor associated kinase 4, [Score=76.3, Expect=8e-14]} {Mouse: ENSMUSG00000059883, Irak4, interleukin-1 receptor-associated kinase 4, [Score=80.9, Expect=2e-15]} {Dmel: FBgn0010441, pll, pelle, [Score=77.0, Expect=2e-14]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=60.5, Expect=3e-09]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=68.2, Expect=3e-12]} {RNA1509_59099} {RNA1310_25517} {RNA815_8731.1}

Mlig455_037235 {REF} {Length: 3581} {Pfam: Protein kinase domain [PF00069.27, score=93.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=83.4]; ABC1 atypical kinase-like domain [PF03109.18, score=23.9]} {Human: ENSG00000070759, TESK2, testis associated actin remodelling kinase 2, [Score=56.2, Expect=1e-07]; ENSG00000285379, RIPK3, receptor interacting serine/threonine kinase 3, [Score=53.5, Expect=1e-06]; ENSG00000129465, RIPK3, receptor interacting serine/threonine kinase 3, [Score=53.5, Expect=1e-06]} {Mouse: ENSMUSG00000059883, Irak4, interleukin-1 receptor-associated kinase 4, [Score=80.1, Expect=2e-15]} {Dmel: FBgn0024227, aurB, aurora B, [Score=52.4, Expect=7e-07]} {Celegans: WBGene00017381, svh-4, Discoidin domain-containing receptor tyrosine kinase B, [Score=55.1, Expect=1e-07]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=67.0, Expect=6e-12]} {RNA1509_59099} {RNA1310_32401} {RNA815_8731.3}

Mlig455_037247 {REF} {Length: 3340} {Pfam: Protein kinase domain [PF00069.27, score=130.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=108.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.6]} {Human: ENSG00000198001, IRAK4, interleukin 1 receptor associated kinase 4, [Score=76.3, Expect=8e-14]} {Mouse: ENSMUSG00000059883, Irak4, interleukin-1 receptor-associated kinase 4, [Score=80.9, Expect=2e-15]} {Dmel: FBgn0010441, pll, pelle, [Score=77.0, Expect=2e-14]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=60.5, Expect=3e-09]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [Score=68.2, Expect=3e-12]} {RNA1509_59099} {RNA1310_25517} {RNA815_24983}
12. MligTC455_11557 202 4.2 Mlig455_002032, Mlig455_002122

Neo: -

Age: Down-Up-Up

Region-enriched R2: 4.361/0.00656

LIMS2 0.954 - - - - 0.954 -

Mlig455_002032 {REF} {Length: 1855} {RNA1509_54456} {RNA1310_17112} {RNA815_6319.1}

Mlig455_002122 {REF} {Length: 3000} {Pfam: LIM domain [PF00412.24, score=36.8]} {Human: ENSG00000072163, LIMS2, LIM zinc finger domain containing 2, [Score=111, Expect=5e-26]; ENSG00000169756, LIMS1, LIM zinc finger domain containing 1, [Score=107, Expect=1e-24]} {Mouse: ENSMUSG00000019920, Lims1, LIM and senescent cell antigen-like domains 1, [Score=107, Expect=1e-24]; ENSMUSG00000024395, Lims2, LIM and senescent cell antigen like domains 2, [Score=103, Expect=2e-23]} {Dmel: FBgn0020249, stck, steamer duck, [Score=131, Expect=3e-33]} {Celegans: WBGene00006826, unc-97, LIM domain-containing protein unc-97, [Score=129, Expect=1e-32]} {Smed: dd_Smed_v6_2476_0_1, dd_Smed_v6_2476_0_1, [Score=139, Expect=6e-36]} {RNA1509_57197} {RNA1310_17112} {RNA815_6319.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA