TomoSeq data search

Data search

Results for MligTC455_52522

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_52522

60

1.24

Mlig455_021733

Neo: -

Age: -

RAC1

Mlig455_021733 {REF} {Length: 1405} {Pfam: Ras family [PF00071.24, score=161.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=73.7]; ADP-ribosylation factor family [PF00025.23, score=24.0]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=217, Expect=5e-72]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=213, Expect=3e-70]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=208, Expect=2e-68]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=217, Expect=4e-72]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=213, Expect=2e-70]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=209, Expect=3e-69]} {Dmel: FBgn0010333, Rac1, [Score=212, Expect=2e-70]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=209, Expect=2e-69]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=207, Expect=7e-69]} {RNA1509_54289} {RNA1310_38039, RNA1509_54289} {RNA1509_54289, RNA815_55313}

Cumulative graph for MligTC455_52522

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.207	1.481	0.58050	1.00000
RegionR2	2.117	1.481	0.10839	0.40627
RegionR3	-0.499	1.481	0.96011	1.00000
RegionR4	-0.797	1.481	0.98144	1.00000
RegionR5	-0.883	1.481	0.98549	1.00000
RegionR6	1.128	1.481	0.29887	0.89035
RegionR7	1.339	1.481	0.35627	0.99295
RegionR8	0.803	1.481	0.62859	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.208	1.481	0.99990	1.00000
RegenerationR2	-0.994	1.481	0.26577	0.71195
RegenerationR3	0.888	1.481	0.41337	0.81084
RegenerationR4	1.074	1.481	0.35182	0.78171
RegenerationR5	2.069	1.481	0.01735	0.22964
RegenerationR6	1.026	1.481	0.24009	0.58797
RegenerationBL	-3.268	1.481	0.23116	0.58234
RegenerationTP	0.335	1.481	0.80220	1.00000

Genes with expression patterns similar to MligTC455_52522

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_52522	60	1.24	Mlig455_021733	Neo: - Age: -	RAC1	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_021733 {REF} {Length: 1405} {Pfam: Ras family [PF00071.24, score=161.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=73.7]; ADP-ribosylation factor family [PF00025.23, score=24.0]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=217, Expect=5e-72]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=213, Expect=3e-70]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=208, Expect=2e-68]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=217, Expect=4e-72]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=213, Expect=2e-70]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=209, Expect=3e-69]} {Dmel: FBgn0010333, Rac1, [Score=212, Expect=2e-70]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=209, Expect=2e-69]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=207, Expect=7e-69]} {RNA1509_54289} {RNA1310_38039, RNA1509_54289} {RNA1509_54289, RNA815_55313}
2.	MligTC455_07174	94	1.96	Mlig455_007312	Neo: - Age: Up-Down-Down		1.753	0.773	-	0.980	-	-	-	Mlig455_007312 {REF} {Length: 240} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_56237} {RNA1310_59534.2} {RNA815_29807}
3.	MligTC455_28700	84	1.76	Mlig455_062682	Neo: - Age: -	CHERP	0.992	-	-	-	0.992	-	-	Mlig455_062682 {REF} {Length: 3833} {TRANSSPLICED} {Pfam: CID domain [PF04818.15, score=81.7]} {Human: ENSG00000085872, CHERP, calcium homeostasis endoplasmic reticulum protein, [RH, Score=140, Expect=2e-33]} {Mouse: ENSMUSG00000052488, Cherp, calcium homeostasis endoplasmic reticulum protein, [RH, Score=140, Expect=1e-33]} {Dmel: FBgn0261872, scaf6, SR-related CTD associated factor 6, [RH, Score=162, Expect=1e-40]} {Celegans: WBGene00006442, tag-65, SR-related CTD associated factor 6, [Score=89.7, Expect=3e-18]} {Smed: dd_Smed_v6_4684_0_1, dd_Smed_v6_4684_0_1, [RH, Score=193, Expect=4e-51]} {RNA1509_37244} {RNA1310_7506} {RNA815_19825}
4.	MligTC455_13797	16	0.33	Mlig455_032687	Neo: - Age: - Region-enriched R4: 5.327/0.01197		0.99	-	-	-	0.990	-	-	Mlig455_032687 {REF} {Length: 629} {NoTransDecoderORF} {RNA1310_93307.2}
5.	MligTC455_20840	378	7.87	Mlig455_023078	Neo: - Age: Up-Down-Up	H6PD	0.978	-	-	0.978	-	-	-	Mlig455_023078 {REF} {Length: 2722} {TRANSSPLICED} {Pfam: Glucose-6-phosphate dehydrogenase, C-terminal domain [PF02781.18, score=99.1]; Glucose-6-phosphate dehydrogenase, NAD binding domain [PF00479.24, score=84.2]} {Human: ENSG00000049239, H6PD, hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase, [Score=167, Expect=3e-43]} {Mouse: ENSMUSG00000028980, H6pd, hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase), [Score=173, Expect=2e-45]} {Dmel: FBgn0004057, Zw, Zwischenferment, [Score=140, Expect=3e-35]} {Celegans: WBGene00007108, gspd-1, Glucose-6-phosphate 1-dehydrogenase, [Score=136, Expect=6e-34]} {Smed: dd_Smed_v6_2965_0_1, dd_Smed_v6_2965_0_1, [Score=130, Expect=3e-32]} {RNA1509_16416} {RNA1310_9105} {RNA815_2264.1}
6.	MligTC455_57726	39	0.82	Mlig455_030142	Neo: - Age: -		0.976	-	-	-	0.976	-	-	Mlig455_030142 {REF} {Length: 234} {NoTransDecoderORF} {RNA1310_117714}
7.	MligTC455_22115	21	0.43	Mlig455_011233	Neo: - Age: Up-Down-Down	ANOS1	0.974	-	-	-	0.974	-	-	Mlig455_011233 {REF} {Length: 5027} {Pfam: Fibronectin type III domain [PF00041.23, score=58.0]; WAP-type (Whey Acidic Protein) 'four-disulfide core' [PF00095.23, score=25.3]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=22.4]} {Human: ENSG00000011201, ANOS1, anosmin 1, [Score=151, Expect=2e-37]} {Celegans: WBGene00002181, kal-1, KALlmann syndrome homolog, [RH, Score=105, Expect=4e-23]} {Smed: dd_Smed_v6_6746_0_1, dd_Smed_v6_6746_0_1, [Score=241, Expect=3e-69]} {RNA1509_26684} {RNA1310_56953} {RNA815_42178}
8.	MligTC455_46723	138	2.87	Mlig455_066171	Neo: - Age: -	CHRNA6	0.974	-	-	0.974	-	-	-	Mlig455_066171 {REF} {Length: 1617} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=107.0]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=48.7]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=127, Expect=8e-32]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=123, Expect=2e-30]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=122, Expect=6e-30]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=131, Expect=2e-33]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=130, Expect=2e-33]} {Celegans: WBGene00006765, unc-29, Acetylcholine receptor subunit beta-type unc-29, [Score=92.0, Expect=4e-20]} {Smed: dd_Smed_v6_14630_0_1, dd_Smed_v6_14630_0_1, [Score=142, Expect=2e-37]} {RNA1509_55012} {RNA1310_6313.1} {RNA815_3014.1}
9.	MligTC455_46724	138	2.87	Mlig455_066190	Neo: - Age: -	CHRNA3	0.974	-	-	0.974	-	-	-	Mlig455_066190 {REF} {Length: 2364} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=274.6]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=248.6]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [RH, Score=432, Expect=2e-146]} {Mouse: ENSMUSG00000027950, Chrnb2, cholinergic receptor, nicotinic, beta polypeptide 2 (neuronal), [RH, Score=413, Expect=6e-139]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=531, Expect=0.0]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=465, Expect=1e-159]} {Smed: dd_Smed_v6_14630_0_1, dd_Smed_v6_14630_0_1, [RH, Score=516, Expect=1e-178]} {RNA1509_36802} {RNA1310_6313.1} {RNA815_3014.1}
10.	MligTC455_12546	26	0.55	Mlig455_021368	Neo: - Age: -		0.967	-	-	-	0.967	-	-	Mlig455_021368 {REF} {Length: 599} {NoTransDecoderORF} {RNA1310_64798.1}
11.	MligTC455_15580	8	0.18	Mlig455_016128	Neo: - Age: -		0.967	-	-	-	0.967	-	-	Mlig455_016128 {REF} {Length: 1492}
12.	MligTC455_19250	57	1.18	Mlig455_050978	Neo: - Age: -	RAC1	0.965	-	-	0.965	-	-	-	Mlig455_050978 {REF} {Length: 1505} {Pfam: Ras family [PF00071.24, score=152.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=64.4]; ADP-ribosylation factor family [PF00025.23, score=23.1]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=208, Expect=2e-68]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=203, Expect=2e-66]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=201, Expect=2e-65]; ENSG00000177105, RHOG, ras homolog family member G, [Score=199, Expect=7e-65]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=208, Expect=1e-68]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=203, Expect=1e-66]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=200, Expect=3e-65]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=199, Expect=5e-65]} {Dmel: FBgn0010333, Rac1, [Score=205, Expect=2e-67]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=211, Expect=6e-70]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=199, Expect=2e-65]} {RNA1310_32838}
13.	MligTC455_05596	38	0.79	Mlig455_028393	Neo: Int S/G2/M Age: -	INPP5F	0.964	-	-	-	-	0.964	-	Mlig455_028393 {REF} {Length: 6235} {TRANSSPLICED} {Pfam: SacI homology domain [PF02383.20, score=261.5]; Inositol phosphatase [PF12456.10, score=28.8]} {Human: ENSG00000198825, INPP5F, inositol polyphosphate-5-phosphatase F, [RH, Score=465, Expect=3e-145]} {Mouse: ENSMUSG00000042105, Inpp5f, inositol polyphosphate-5-phosphatase F, [RH, Score=461, Expect=6e-144]} {Dmel: FBgn0038890, CG7956, [RH, Score=446, Expect=7e-140]} {Celegans: WBGene00012353, W09C5.7, [RH, Score=300, Expect=7e-88]} {Smed: dd_Smed_v6_6584_0_2, dd_Smed_v6_6584_0_2, [RH, Score=511, Expect=5e-162]} {RNA1509_10453} {RNA1310_4056.1, RNA1509_10453} {RNA1509_10453, RNA815_2832}
14.	MligTC455_18502	173	3.6	Mlig455_021723	Neo: - Age: - Region-enriched R7: 2.784/0.00010		0.964	-	-	0.964	-	-	-	Mlig455_021723 {REF} {Length: 1402} {NoTransDecoderORF} {RNA1509_55649} {RNA1310_30889, RNA1509_55649} {RNA1509_55649, RNA815_11762}
15.	MligTC455_38185	1903	39.64	Mlig455_021321	Neo: - Age: logFC(26M/2M)=-0.353 Region-enriched R5: 5.802/0.00000 Regeneration-downregulated R2: -7.443 Regeneration-depleted R2: -7.443		0.962	-	-	-	-	0.962	-	Mlig455_021321 {REF} {Length: 801} {RNA1509_1093, RNA1509_12817, RNA1509_14343, RNA1509_21404, RNA1509_26001, RNA1509_2859, RNA1509_29365, RNA1509_33213, RNA1509_45497} {RNA1310_42010, RNA1509_1093, RNA1509_12817, RNA1509_14343, RNA1509_21404, RNA1509_26001, RNA1509_2859, RNA1509_29365, RNA1509_33213, RNA1509_45497} {RNA1509_1093, RNA1509_12817, RNA1509_14343, RNA1509_21404, RNA1509_26001, RNA1509_2859, RNA1509_29365, RNA1509_33213, RNA1509_45497, RNA815_32090}
16.	MligTC455_19768	85	1.77	Mlig455_024294	Neo: - Age: Up-Down-Down		0.96	-	-	0.960	-	-	-	Mlig455_024294 {REF} {Length: 7503} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=45.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=27.8]} {RNA1509_39072} {RNA1310_19077.2} {RNA815_33603}
17.	MligTC455_46744	268	5.58	Mlig455_018072	Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.748		0.96	-	-	0.960	-	-	-	Mlig455_018072 {REF} {Length: 1515} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=19.2]} {RNA1509_52366} {RNA1310_36796} {RNA815_38428}
18.	MligTC455_16176	76	1.58	Mlig455_048486	Neo: Int S/G2/M Age: -	GCM1	0.958	-	-	0.958	-	-	-	Mlig455_048486 {REF} {Length: 2372} {Pfam: GCM motif protein [PF03615.17, score=223.0]} {Human: ENSG00000137270, GCM1, glial cells missing homolog 1, [RH, Score=197, Expect=3e-57]; ENSG00000124827, GCM2, glial cells missing homolog 2, [RH, Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000023333, Gcm1, glial cells missing homolog 1, [RH, Score=192, Expect=1e-55]; ENSMUSG00000021362, Gcm2, glial cells missing homolog 2, [RH, Score=189, Expect=1e-53]} {Dmel: FBgn0014179, gcm, glial cells missing, [RH, Score=230, Expect=2e-69]} {Smed: dd_Smed_v6_15107_0_1, dd_Smed_v6_15107_0_1, [RH, Score=186, Expect=3e-54]} {RNA1509_58813} {RNA1310_66943} {RNA815_43872}
19.	MligTC455_36667	84	1.75	Mlig455_016177	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.440 Region-enriched R2: 4.490/0.00556 Region-enriched R7: 4.016/0.01613		0.954	-	-	0.954	-	-	-	Mlig455_016177 {REF} {Length: 3035} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=47.6]; Immunoglobulin domain [PF13927.8, score=47.0]; Immunoglobulin domain [PF00047.27, score=32.1]; Immunoglobulin domain [PF13895.8, score=27.4]; Natural killer cell receptor 2B4 [PF11465.10, score=26.4]; Immunoglobulin V-set domain [PF07686.19, score=23.5]} {Dmel: FBgn0259245, DIP-beta, Dpr-interacting protein beta, [Score=58.9, Expect=3e-09]} {Celegans: WBGene00006985, zig-8, Zwei Ig domain protein zig-8, [RH, Score=57.0, Expect=4e-09]} {Smed: dd_Smed_v6_21969_0_1, dd_Smed_v6_21969_0_1, [Score=72.0, Expect=6e-14]} {RNA1509_49618} {RNA1310_15195} {RNA815_58259}

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