TomoSeq data search

Data search

Results for MligTC455_28355

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_28355

294

6.12

Mlig455_004369

Neo: -

Age: Up-Down-Up

Mlig455_004369 {REF} {Length: 4652} {TRANSSPLICED} {Pfam: Wolframin cysteine-rich domain [PF20053.1, score=73.1]; Wolframin C-terminal OB-fold domain [PF19913.1, score=32.7]} {RNA1509_20192} {RNA1310_15643, RNA1509_20192} {RNA1509_20192, RNA815_12266}

Cumulative graph for MligTC455_28355

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.813	3.102	0.55408	1.00000
RegionR2	0.908	3.102	0.21896	0.58710
RegionR3	0.064	3.102	0.90953	1.00000
RegionR4	-1.519	3.102	0.03167	0.14128
RegionR5	0.439	3.102	0.36681	0.71946
RegionR6	0.708	3.102	0.17993	0.74352
RegionR7	0.71	3.102	0.27206	0.90352
RegionR8	-0.497	3.102	0.59733	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.709	3.102	0.40267	1.00000
RegenerationR2	-0.15	3.102	0.80825	0.99259
RegenerationR3	-0.234	3.102	0.73908	0.96055
RegenerationR4	0.357	3.102	0.63761	0.92618
RegenerationR5	0.172	3.102	0.77360	0.98015
RegenerationR6	0.361	3.102	0.59329	0.86553
RegenerationBL	0.229	3.102	0.77177	1.00000
RegenerationTP	-0.048	3.102	0.95907	1.00000

Genes with expression patterns similar to MligTC455_28355

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_28355	294	6.12	Mlig455_004369	Neo: - Age: Up-Down-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_004369 {REF} {Length: 4652} {TRANSSPLICED} {Pfam: Wolframin cysteine-rich domain [PF20053.1, score=73.1]; Wolframin C-terminal OB-fold domain [PF19913.1, score=32.7]} {RNA1509_20192} {RNA1310_15643, RNA1509_20192} {RNA1509_20192, RNA815_12266}
2.	MligTC455_28354	271	5.64	Mlig455_004294	Neo: - Age: -		5.91	0.986	0.987	0.970	0.977	0.996	0.994	Mlig455_004294 {REF} {Length: 1225} {RNA1509_34039} {RNA1310_34592, RNA1509_34039} {RNA1509_34039, RNA815_39126}
3.	MligTC455_23162	1050	21.88	Mlig455_037883, Mlig455_039045	Neo: - Age: logFC(26M/2M)=-0.251	CFAP221	0.97	-	-	0.970	-	-	-	Mlig455_037883 {REF} {Length: 4007} {TRANSSPLICED} {Pfam: Flagellar-associated PapD-like [PF14874.8, score=32.3]; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=20.3]} {Human: ENSG00000163075, CFAP221, cilia and flagella associated protein 221, [RH, Score=403, Expect=4e-126]} {Mouse: ENSMUSG00000036962, Cfap221, cilia and flagella associated protein 221, [RH, Score=389, Expect=9e-121]} {Smed: dd_Smed_v6_12752_0_1, dd_Smed_v6_12752_0_1, [RH, Score=250, Expect=1e-71]} {RNA1509_8718} {RNA1310_5638.1} {RNA815_9138} Mlig455_039045 {REF} {Length: 3771} {TRANSSPLICED} {Pfam: Flagellar-associated PapD-like [PF14874.8, score=32.4]; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=20.3]} {Human: ENSG00000163075, CFAP221, cilia and flagella associated protein 221, [RH, Score=401, Expect=2e-125]} {Mouse: ENSMUSG00000036962, Cfap221, cilia and flagella associated protein 221, [RH, Score=387, Expect=2e-120]} {Smed: dd_Smed_v6_12752_0_1, dd_Smed_v6_12752_0_1, [RH, Score=252, Expect=3e-72]} {RNA1509_8718} {RNA1310_5638.1} {RNA815_9138}
4.	MligTC455_52792	229	4.77	Mlig455_038012	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_038012 {REF} {Length: 3785} {TRANSSPLICED} {Pfam: Vacuolar sorting 38 and autophagy-related subunit 14 [PF10186.11, score=24.9]} {RNA1509_42202, RNA1509_55892, RNA1509_59923} {RNA1310_23418.2, RNA1509_42202, RNA1509_55892, RNA1509_59923} {RNA1509_42202, RNA1509_55892, RNA1509_59923, RNA815_10560}
5.	MligTC455_33424	282	5.87	Mlig455_048396, Mlig455_048398, Mlig455_049078	Neo: - Age: logFC(26M/2M)=0.672	ABCC1, ABCC3	0.965	-	-	0.965	-	-	-	Mlig455_048396 {REF} {Length: 5455} {Pfam: ABC transporter [PF00005.29, score=83.5]; ABC transporter transmembrane region [PF00664.25, score=81.3]; RecF/RecN/SMC N terminal domain [PF02463.21, score=21.4]} {Human: ENSG00000108846, ABCC3, ATP binding cassette subfamily C member 3, [Score=462, Expect=1e-150]; ENSG00000023839, ABCC2, ATP binding cassette subfamily C member 2, [Score=455, Expect=1e-145]; ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [Score=443, Expect=1e-143]; ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [Score=443, Expect=1e-143]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=463, Expect=4e-149]; ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [Score=459, Expect=1e-147]; ENSMUSG00000025194, Abcc2, ATP-binding cassette, sub-family C (CFTR/MRP), member 2, [Score=458, Expect=4e-147]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=464, Expect=7e-150]} {Celegans: WBGene00003408, mrp-2, Multidrug resistance related protein 2, [Score=419, Expect=5e-133]} {Smed: dd_Smed_v6_9208_0_6, dd_Smed_v6_9208_0_6, [Score=469, Expect=4e-157]} {RNA1509_7716} {RNA1310_814.2} {RNA815_219} Mlig455_048398 {REF} {Length: 3033} {Human: ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [Score=112, Expect=3e-26]; ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [Score=112, Expect=3e-26]; ENSG00000023839, ABCC2, ATP binding cassette subfamily C member 2, [Score=108, Expect=5e-25]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=119, Expect=6e-29]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=101, Expect=8e-23]} {Celegans: WBGene00003413, mrp-7, [Score=103, Expect=1e-23]} {Smed: dd_Smed_v6_13596_0_1, dd_Smed_v6_13596_0_1, [Score=110, Expect=2e-26]} {RNA1509_7716} {RNA1310_22151} {RNA815_219} Mlig455_049078 {REF} {Length: 5509} {Pfam: ABC transporter transmembrane region [PF00664.25, score=239.5]; ABC transporter [PF00005.29, score=175.8]; RecF/RecN/SMC N terminal domain [PF02463.21, score=39.6]; 50S ribosome-binding GTPase [PF01926.25, score=23.8]} {Human: ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [Score=1172, Expect=0.0]; ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [Score=1172, Expect=0.0]; ENSG00000108846, ABCC3, ATP binding cassette subfamily C member 3, [Score=1155, Expect=0.0]; ENSG00000023839, ABCC2, ATP binding cassette subfamily C member 2, [Score=1142, Expect=0.0]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=1205, Expect=0.0]; ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [Score=1166, Expect=0.0]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=1157, Expect=0.0]} {Celegans: WBGene00003413, mrp-7, [Score=971, Expect=0.0]} {Smed: dd_Smed_v6_9208_0_1, dd_Smed_v6_9208_0_1, [RH, Score=1146, Expect=0.0]} {RNA1509_7716} {RNA1310_814.2, RNA1509_7716} {RNA1509_7716, RNA815_219}
6.	MligTC455_52986	1261	26.27	Mlig455_020265, Mlig455_022497	Neo: - Age: -	PRKAA2	0.958	-	-	-	0.958	-	-	Mlig455_020265 {REF} {Length: 4377} {TRANSSPLICED} {tRNA: Ala(AGC), score=56.0} {Pfam: Protein kinase domain [PF00069.27, score=256.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=153.5]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=41.0]; ABC1 atypical kinase-like domain [PF03109.18, score=29.4]; Kinase-like [PF14531.8, score=28.0]; RIO1 family [PF01163.24, score=22.5]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [RH, Score=601, Expect=0.0]; ENSG00000132356, PRKAA1, protein kinase AMP-activated catalytic subunit alpha 1, [RH, Score=579, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [RH, Score=597, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [RH, Score=575, Expect=0.0]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [RH, Score=585, Expect=0.0]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [RH, Score=565, Expect=0.0]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [RH, Score=588, Expect=0.0]} {RNA1509_33279, RNA1509_38411, RNA1509_56756, RNA1509_8981} {RNA1310_13304.1, RNA1509_33279, RNA1509_38411, RNA1509_56756, RNA1509_8981} {RNA1509_33279, RNA1509_38411, RNA1509_56756, RNA1509_8981, RNA815_4575.1} Mlig455_022497 {REF} {Length: 3864} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=256.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=153.6]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=41.1]; ABC1 atypical kinase-like domain [PF03109.18, score=29.4]; Kinase-like [PF14531.8, score=27.6]; RIO1 family [PF01163.24, score=22.5]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [RH, Score=601, Expect=0.0]; ENSG00000132356, PRKAA1, protein kinase AMP-activated catalytic subunit alpha 1, [RH, Score=580, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [RH, Score=597, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [RH, Score=575, Expect=0.0]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [RH, Score=590, Expect=0.0]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [RH, Score=568, Expect=0.0]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [RH, Score=593, Expect=0.0]} {RNA1509_8981} {RNA1310_13304.1} {RNA815_4575.1}
7.	MligTC455_25460	203	4.23	Mlig455_017949	Neo: Irradiation Age: -	UTP25	0.957	-	-	-	-	-	0.957	Mlig455_017949 {REF} {Length: 2589} {TRANSSPLICED} {Pfam: Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 [PF06862.14, score=383.4]; DEAD/DEAH box helicase [PF00270.31, score=19.0]} {Human: ENSG00000117597, UTP25, UTP25, small subunit processor component, [RH, Score=293, Expect=4e-89]} {Mouse: ENSMUSG00000016181, Diexf, digestive organ expansion factor homolog (zebrafish), [RH, Score=286, Expect=2e-86]} {Dmel: FBgn0034933, CG3735, [RH, Score=253, Expect=1e-74]} {Celegans: WBGene00012756, Y41C4A.9, [RH, Score=191, Expect=4e-53]} {Smed: dd_Smed_v6_9470_0_1, dd_Smed_v6_9470_0_1, [RH, Score=153, Expect=1e-39]} {RNA1509_25312} {RNA1310_17305.1, RNA1509_25312} {RNA1509_25312, RNA815_9754}
8.	MligTC455_52524	30	0.63	Mlig455_059749	Neo: - Age: -		0.954	-	-	-	-	-	0.954	Mlig455_059749 {REF} {Length: 2336} {RNA1509_39451} {RNA1310_39324} {RNA815_6430}
9.	MligTC455_28043	84	1.76	Mlig455_066049	Neo: Irradiation Age: Down-Up-Down	LDB2	0.953	-	-	-	-	-	0.953	Mlig455_066049 {REF} {Length: 3928} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=99.0]; LIM interaction domain (LID) [PF17916.3, score=40.0]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=218, Expect=9e-65]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=213, Expect=6e-63]; ENSMUSG00000025223, Ldb1, LIM domain binding 1, [Score=209, Expect=2e-61]} {Dmel: FBgn0013764, Chi, Chip, [Score=191, Expect=1e-52]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=83.2, Expect=2e-16]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=201, Expect=1e-56]} {RNA1509_53153, RNA1509_58910} {RNA1310_20938, RNA1509_53153} {RNA1509_53153, RNA815_15319}
10.	MligTC455_31969	34	0.72	Mlig455_014054, Mlig455_015584, Mlig455_068454	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_014054 {REF} {Length: 818} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=42.9]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_14744.1} Mlig455_015584 {REF} {Length: 437} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=60.2]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_15609} Mlig455_068454 {REF} {Length: 2985} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=115.8]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=55.8, Expect=1e-09]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_14744.1}
11.	MligTC455_48638	410	8.55	Mlig455_001990, Mlig455_002085	Neo: - Age: -	GCLM	0.953	-	-	-	0.953	-	-	Mlig455_001990 {REF} {Length: 1993} {Human: ENSG00000023909, GCLM, glutamate-cysteine ligase modifier subunit, [Score=115, Expect=3e-30]} {Mouse: ENSMUSG00000028124, Gclm, glutamate-cysteine ligase, modifier subunit, [RH, Score=118, Expect=3e-31]} {Smed: dd_Smed_v6_487_0_1, dd_Smed_v6_487_0_1, [RH, Score=123, Expect=1e-33]} {RNA1509_31512, RNA1509_8299} {RNA1310_15206.1, RNA1509_31512, RNA1509_8299} {RNA1509_31512, RNA1509_8299, RNA815_6124} Mlig455_002085 {REF} {Length: 1370} {TRANSSPLICED} {Human: ENSG00000023909, GCLM, glutamate-cysteine ligase modifier subunit, [Score=117, Expect=1e-30]} {Mouse: ENSMUSG00000028124, Gclm, glutamate-cysteine ligase, modifier subunit, [RH, Score=119, Expect=1e-31]} {Smed: dd_Smed_v6_487_0_1, dd_Smed_v6_487_0_1, [RH, Score=125, Expect=1e-34]} {RNA1509_8299} {RNA1310_15206.3} {RNA815_6124}
12.	MligTC455_12863	41	0.85	Mlig455_004293	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_004293 {REF} {Length: 2112} {Pfam: Immunoglobulin domain [PF13927.8, score=26.8]; Immunoglobulin domain [PF13895.8, score=23.4]} {RNA1509_37987} {RNA1310_55399} {RNA815_29559}
13.	MligTC455_25307	972	20.25	Mlig455_012107, Mlig455_029018	Neo: Int S/G2/M Age: -	TRAP1	0.95	-	-	-	0.950	-	-	Mlig455_012107 {REF} {Length: 3224} {TRANSSPLICED} {Pfam: Hsp90 protein [PF00183.20, score=315.0]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=38.1]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=29.5]} {Human: ENSG00000126602, TRAP1, TNF receptor associated protein 1, [RH, Score=670, Expect=0.0]} {Mouse: ENSMUSG00000005981, Trap1, TNF receptor-associated protein 1, [RH, Score=681, Expect=0.0]} {Dmel: FBgn0026761, Trap1, [RH, Score=665, Expect=0.0]} {Celegans: WBGene00020110, hsp-75, Heat Shock Protein, [RH, Score=524, Expect=1e-177]} {Smed: dd_Smed_v6_1445_0_1, dd_Smed_v6_1445_0_1, [RH, Score=701, Expect=0.0]} {RNA1509_39246, RNA1509_45213} {RNA1310_3809, RNA1509_39246, RNA1509_45213} {RNA1509_39246, RNA1509_45213, RNA815_3114} Mlig455_029018 {REF} {Length: 3523} {TRANSSPLICED} {Pfam: Hsp90 protein [PF00183.20, score=312.8]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=38.1]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=29.5]} {Human: ENSG00000126602, TRAP1, TNF receptor associated protein 1, [RH, Score=672, Expect=0.0]} {Mouse: ENSMUSG00000005981, Trap1, TNF receptor-associated protein 1, [RH, Score=685, Expect=0.0]} {Dmel: FBgn0026761, Trap1, [RH, Score=666, Expect=0.0]} {Celegans: WBGene00020110, hsp-75, Heat Shock Protein, [RH, Score=525, Expect=3e-178]} {Smed: dd_Smed_v6_1445_0_1, dd_Smed_v6_1445_0_1, [RH, Score=703, Expect=0.0]} {RNA1509_35454, RNA1509_43045, RNA1509_49882, RNA1509_55889, RNA1509_8441} {RNA1310_3809, RNA1509_35454, RNA1509_43045, RNA1509_49882, RNA1509_55889, RNA1509_8441} {RNA1509_35454, RNA1509_43045, RNA1509_49882, RNA1509_55889, RNA1509_8441, RNA815_3114}

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