Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_52550 | 164 | 3.41 | Mlig455_002239 | Neo: - |
Mlig455_002239 {REF} {Length: 3509} {Pfam: Innexin [PF00876.20, score=62.4]} {Smed: dd_Smed_v6_9861_0_1, dd_Smed_v6_9861_0_1, [Score=60.1, Expect=9e-10]} {RNA1509_36214} {RNA1310_17023} {RNA815_33132} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -4.15 | 2.414 | 0.42332 | 1.00000 | |
RegionR2 | 1.959 | 2.414 | 0.02330 | 0.16951 | |
RegionR3 | -0.456 | 2.414 | 0.95099 | 1.00000 | |
RegionR4 | 0.496 | 2.414 | 0.63871 | 0.94479 | |
RegionR5 | -0.886 | 2.414 | 0.98384 | 1.00000 | |
RegionR6 | -0.012 | 2.414 | 0.85645 | 1.00000 | |
RegionR7 | 1.438 | 2.414 | 0.15049 | 0.72021 | |
RegionR8 | 1.612 | 2.414 | 0.16569 | 0.73670 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -0.795 | 2.414 | 0.99992 | 1.00000 | |
RegenerationR2 | -1.047 | 2.414 | 0.03176 | 0.29238 | |
RegenerationR3 | 0.581 | 2.414 | 0.41686 | 0.81299 | |
RegenerationR4 | -0.376 | 2.414 | 0.62658 | 0.92209 | |
RegenerationR5 | 0.614 | 2.414 | 0.38454 | 0.78876 | |
RegenerationR6 | -1.43 | 2.414 | 0.09195 | 0.37716 | |
RegenerationBL | -1.951 | 2.414 | 0.07221 | 0.31311 | |
RegenerationTP | -0.64 | 2.414 | 0.42904 | 0.85198 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_52550 | 164 | 3.41 | Mlig455_002239 | Neo: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002239 {REF} {Length: 3509} {Pfam: Innexin [PF00876.20, score=62.4]} {Smed: dd_Smed_v6_9861_0_1, dd_Smed_v6_9861_0_1, [Score=60.1, Expect=9e-10]} {RNA1509_36214} {RNA1310_17023} {RNA815_33132} | |
2. | MligTC455_31031 | 361 | 7.53 | Mlig455_009779 | Neo: - Age: - Region-enriched R2: 2.821/0.00350 |
LRRN3 | 5.043 | 0.707 | 0.907 | 0.953 | 0.885 | 0.879 | 0.712 | Mlig455_009779 {REF} {Length: 3647} {Pfam: Immunoglobulin domain [PF13927.8, score=35.5]; Immunoglobulin I-set domain [PF07679.18, score=34.5]; Immunoglobulin domain [PF00047.27, score=29.1]; Apolipoprotein A1/A4/E domain [PF01442.20, score=19.2]} {Human: ENSG00000173114, LRRN3, leucine rich repeat neuronal 3, [Score=56.2, Expect=2e-07]} {Dmel: FBgn0032479, CG16974, [RH, Score=116, Expect=3e-26]} {RNA1509_10344} {RNA1310_3046.1} {RNA815_12103} |
3. | MligTC455_31695 | 158 | 3.3 | Mlig455_009775 | Neo: - Age: Down-Up-Up Region-enriched R2: 3.086/0.01194 |
3.408 | - | - | 0.957 | 0.974 | 0.740 | 0.737 | Mlig455_009775 {REF} {Length: 2186} {RNA1310_24838} {RNA815_18727} | |
4. | MligTC455_46155 | 116 | 2.42 | Mlig455_027239 | Neo: - Age: - Region-enriched R2: 4.163/0.03818 |
GRK3 | 3.375 | - | 0.819 | 0.814 | 0.959 | 0.783 | - | Mlig455_027239 {REF} {Length: 2919} {Pfam: Protein kinase domain [PF00069.27, score=226.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=100.5]; Regulator of G protein signaling domain [PF00615.21, score=48.3]} {Human: ENSG00000100077, GRK3, G protein-coupled receptor kinase 3, [Score=845, Expect=0.0]; ENSG00000173020, GRK2, G protein-coupled receptor kinase 2, [Score=838, Expect=0.0]} {Mouse: ENSMUSG00000042249, Grk3, G protein-coupled receptor kinase 3, [Score=838, Expect=0.0]; ENSMUSG00000024858, Grk2, G protein-coupled receptor kinase 2, [Score=838, Expect=0.0]} {Dmel: FBgn0260798, Gprk1, G protein-coupled receptor kinase 1, [Score=842, Expect=0.0]} {Celegans: WBGene00001709, grk-2, G protein-coupled receptor kinase 2, [Score=819, Expect=0.0]} {Smed: dd_Smed_v6_6480_0_1, dd_Smed_v6_6480_0_1, [Score=949, Expect=0.0]} {RNA1509_7002} {RNA1310_16658} {RNA815_28070} |
5. | MligTC455_38698 | 945 | 19.68 | Mlig455_009780 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.658 Region-enriched R2: 1.739/0.00137 Regeneration-downregulated BL: -2.534 Regeneration-depleted BL: -2.534 |
COLEC10 | 3.364 | - | 0.915 | 0.785 | 0.951 | 0.713 | - | Mlig455_009780 {REF} {Length: 1506} {Pfam: Lectin C-type domain [PF00059.23, score=43.5]} {Human: ENSG00000184374, COLEC10, collectin subfamily member 10, [Score=50.4, Expect=2e-07]} {Mouse: ENSMUSG00000038591, Colec10, collectin sub-family member 10, [Score=47.8, Expect=1e-06]} {RNA1509_22697} {RNA1310_23822} {RNA815_11460} |
6. | MligTC455_46725 | 1277 | 26.6 | Mlig455_002797, Mlig455_002811 | Neo: - Age: - Region-enriched R7: 2.089/0.02985 |
TMPRSS4 | 2.588 | - | - | 0.953 | 0.832 | 0.803 | - | Mlig455_002797 {REF} {Length: 1278} {Pfam: Trypsin [PF00089.28, score=217.0]; Trypsin-like peptidase domain [PF13365.8, score=29.1]} {Human: ENSG00000137648, TMPRSS4, transmembrane serine protease 4, [RH, Score=177, Expect=8e-53]} {Mouse: ENSMUSG00000032091, Tmprss4, transmembrane protease, serine 4, [RH, Score=171, Expect=5e-49]} {Dmel: FBgn0035501, CG1299, [RH, Score=160, Expect=2e-44]} {Celegans: WBGene00006619, try-1, TRYpsin-like protease, [Score=127, Expect=3e-34]} {Smed: dd_Smed_v6_2492_0_1, dd_Smed_v6_2492_0_1, [RH, Score=283, Expect=4e-94]} {RNA1509_14801} {RNA1310_24334.1} {RNA815_10378} Mlig455_002811 {REF} {Length: 1406} {Pfam: Trypsin [PF00089.28, score=216.7]; Trypsin-like peptidase domain [PF13365.8, score=29.0]} {Human: ENSG00000137648, TMPRSS4, transmembrane serine protease 4, [RH, Score=176, Expect=1e-52]} {Mouse: ENSMUSG00000032091, Tmprss4, transmembrane protease, serine 4, [RH, Score=171, Expect=3e-49]; ENSMUSG00000033825, Tpsb2, tryptase beta 2, [RH, Score=163, Expect=9e-48]} {Dmel: FBgn0035501, CG1299, [RH, Score=160, Expect=2e-44]} {Celegans: WBGene00006619, try-1, TRYpsin-like protease, [Score=127, Expect=3e-34]} {Smed: dd_Smed_v6_2492_0_1, dd_Smed_v6_2492_0_1, [RH, Score=285, Expect=7e-95]} {RNA1509_14801} {RNA1310_24334.1, RNA1509_14801} {RNA1509_14801, RNA815_10378} |
7. | MligTC455_23788 | 70 | 1.47 | Mlig455_001520 | Neo: - Age: - |
2.574 | - | 0.780 | 0.969 | 0.825 | - | - | Mlig455_001520 {REF} {Length: 600} {NoTransDecoderORF} {RNA1310_15822} {RNA815_34166} | |
8. | MligTC455_28483 | 912 | 19 | Mlig455_056019 | Neo: - Age: - Region-enriched R2: 1.652/0.01432 |
XPO4 | 2.573 | - | - | 0.963 | 0.890 | 0.720 | - | Mlig455_056019 {REF} {Length: 4372} {TRANSSPLICED} {Human: ENSG00000132953, XPO4, exportin 4, [RH, Score=241, Expect=2e-64]} {Mouse: ENSMUSG00000021952, Xpo4, exportin 4, [RH, Score=241, Expect=7e-65]} {Smed: dd_Smed_v6_10330_0_1, dd_Smed_v6_10330_0_1, [RH, Score=72.4, Expect=1e-12]} {RNA1509_11967, RNA1509_55558} {RNA1310_2509.1, RNA1509_55558} {RNA1509_55558, RNA815_8640} |
9. | MligTC455_19449 | 235 | 4.9 | Mlig455_048896 | Neo: - Age: logFC(26M/2M)=-0.470 Region-enriched R2: 3.185/0.00006 |
2.565 | - | - | 0.803 | 0.953 | 0.809 | - | Mlig455_048896 {REF} {Length: 1819} {Pfam: Innexin [PF00876.20, score=25.6]} {RNA1509_47060} {RNA1310_19756.1, RNA1509_47060} {RNA1509_47060, RNA815_16217} | |
10. | MligTC455_37010 | 127 | 2.64 | Mlig455_012355 | Neo: - Age: Up-Down-Down Region-enriched R2: 4.232/0.00085 |
2.516 | - | - | 0.952 | 0.733 | 0.831 | - | Mlig455_012355 {REF} {Length: 7737} {Pfam: HGWP repeat [PF03578.17, score=19.0]} {RNA1509_28298} {RNA1310_3268} {RNA815_628} | |
11. | MligTC455_48274 | 503 | 10.47 | Mlig455_044322 | Neo: - Age: logFC(26M/2M)=0.371 Region-specific R2: 4.114 Region-enriched R2: 2.835/0.00021 Regeneration-downregulated R2: -2.368 Regeneration-depleted R2: -2.368 |
2.515 | - | 0.955 | - | 0.835 | - | 0.725 | Mlig455_044322 {REF} {Length: 632} {RNA1509_20965} {RNA1310_55481} {RNA815_28392} | |
12. | MligTC455_48792 | 145 | 3.02 | Mlig455_049885 | Neo: - Age: - |
2.478 | - | 0.711 | 0.808 | 0.959 | - | - | Mlig455_049885 {REF} {Length: 1335} {RNA1509_59166} {RNA1310_26794.2} {RNA815_13204} | |
13. | MligTC455_14125 | 432 | 9.01 | Mlig455_031050 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-1.941 Region-specific R2: 7.318 Region-enriched R2: 7.339/0.00000 |
OTOG | 1.896 | - | 0.946 | - | 0.950 | - | - | Mlig455_031050 {REF} {Length: 2951} {Pfam: Spondin-like TSP1 domain [PF19028.2, score=32.8]; Pacifastin inhibitor (LCMII) [PF05375.15, score=25.4]} {Human: ENSG00000188162, OTOG, otogelin, [Score=49.3, Expect=6e-06]} {Mouse: ENSMUSG00000029797, Sspo, SCO-spondin, [Score=53.9, Expect=1e-07]} {Smed: dd_Smed_v6_628_0_1, dd_Smed_v6_628_0_1, [Score=117, Expect=3e-29]} {RNA1509_2451} {RNA1310_3554.1} {RNA815_1109} |
14. | MligTC455_45719 | 94 | 1.96 | Mlig455_056535 | Neo: - Age: - |
CHRNA6 | 1.866 | - | - | 0.902 | 0.964 | - | - | Mlig455_056535 {REF} {Length: 2532} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=102.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=75.5]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=127, Expect=1e-31]; ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=125, Expect=4e-31]} {Mouse: ENSMUSG00000032269, Htr3a, 5-hydroxytryptamine (serotonin) receptor 3A, [Score=125, Expect=5e-31]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=120, Expect=1e-29]} {Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=117, Expect=4e-28]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=125, Expect=3e-31]} {Smed: dd_Smed_v6_18184_0_1, dd_Smed_v6_18184_0_1, [Score=122, Expect=4e-30]} {RNA1509_7752} {RNA1310_37530} {RNA815_18433} |
15. | MligTC455_36325 | 46 | 0.96 | Mlig455_013353 | Neo: - Age: Up-Down-Down |
SLC13A5 | 1.843 | - | - | 0.950 | - | 0.893 | - | Mlig455_013353 {REF} {Length: 4075} {TRANSSPLICED} {Pfam: Sodium:sulfate symporter transmembrane region [PF00939.21, score=297.5]; Citrate transporter [PF03600.18, score=99.1]} {Human: ENSG00000141485, SLC13A5, solute carrier family 13 member 5, [Score=385, Expect=8e-124]} {Mouse: ENSMUSG00000001095, Slc13a2, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, [Score=365, Expect=7e-116]; ENSMUSG00000020805, Slc13a5, solute carrier family 13 (sodium-dependent citrate transporter), member 5, [Score=358, Expect=1e-113]; ENSMUSG00000018459, Slc13a3, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3, [Score=350, Expect=3e-110]; ENSMUSG00000029700, Slc13a1, solute carrier family 13 (sodium/sulfate symporters), member 1, [Score=347, Expect=5e-109]} {Dmel: FBgn0036816, Indy, I'm not dead yet, [Score=290, Expect=1e-87]} {Celegans: WBGene00003517, nac-1, Sodium-dependent low-affinity dicarboxylate transporter 1, [Score=319, Expect=7e-99]} {Smed: dd_Smed_v6_5476_0_1, dd_Smed_v6_5476_0_1, [Score=327, Expect=8e-102]} {RNA1509_49327} {RNA1310_3932} {RNA815_2313} |
16. | MligTC455_39632 | 71 | 1.48 | Mlig455_039338 | Neo: - Age: Up-Down-Down Region-enriched R2: 4.404/0.02299 |
APBA1 | 1.834 | - | 0.953 | - | - | 0.881 | - | Mlig455_039338 {REF} {Length: 5781} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=122.8]; PDZ domain [PF00595.26, score=87.0]; PDZ domain [PF17820.3, score=50.7]} {Human: ENSG00000107282, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=476, Expect=5e-157]; ENSG00000276497, APBA1, amyloid beta precursor protein binding family A member 1, [RH, Score=474, Expect=2e-161]; ENSG00000276495, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=474, Expect=3e-157]; ENSG00000034053, APBA2, amyloid beta precursor protein binding family A member 2, [RH, Score=474, Expect=3e-157]} {Mouse: ENSMUSG00000030519, Apba2, amyloid beta (A4) precursor protein-binding, family A, member 2, [RH, Score=476, Expect=3e-158]; ENSMUSG00000024897, Apba1, amyloid beta (A4) precursor protein binding, family A, member 1, [RH, Score=475, Expect=2e-156]} {Dmel: FBgn0052677, X11Lbeta, [Score=532, Expect=2e-168]} {Celegans: WBGene00002999, lin-10, [Score=519, Expect=1e-172]} {Smed: dd_Smed_v6_2836_0_2, dd_Smed_v6_2836_0_2, [Score=550, Expect=0.0]} {RNA1509_43941, RNA1509_55204} {RNA1310_18864.1, RNA1509_43941} {RNA1509_43941, RNA815_11653} |
17. | MligTC455_16962 | 22 | 0.45 | Mlig455_013331 | Neo: - Age: - |
PXDN | 1.729 | - | - | 0.951 | 0.778 | - | - | Mlig455_013331 {REF} {Length: 2939} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=51.7]; Immunoglobulin domain [PF13927.8, score=47.8]; Immunoglobulin domain [PF00047.27, score=41.8]; Immunoglobulin domain [PF13895.8, score=34.9]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=22.3]} {Human: ENSG00000130508, PXDN, peroxidasin, [Score=53.9, Expect=4e-07]; ENSG00000174498, IGDCC3, immunoglobulin superfamily DCC subclass member 3, [Score=53.1, Expect=9e-07]; ENSG00000113805, CNTN3, contactin 3, [Score=52.0, Expect=2e-06]; ENSG00000155657, TTN, titin, [Score=51.6, Expect=3e-06]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=54.3, Expect=3e-07]; ENSMUSG00000020674, Pxdn, peroxidasin, [Score=52.8, Expect=8e-07]; ENSMUSG00000032394, Igdcc3, immunoglobulin superfamily, DCC subclass, member 3, [Score=52.8, Expect=8e-07]; ENSMUSG00000030075, Cntn3, contactin 3, [Score=52.8, Expect=9e-07]} {Dmel: FBgn0003984, vn, vein, [Score=63.5, Expect=2e-10]} {Celegans: WBGene00006776, unc-40, Unc-40 protein, [Score=53.9, Expect=2e-07]} {Smed: dd_Smed_v6_15790_0_1, dd_Smed_v6_15790_0_1, [RH, Score=70.5, Expect=3e-13]} {RNA1310_57623} {RNA815_38366} |
18. | MligTC455_20808 | 114 | 2.38 | Mlig455_055632 | Neo: - Age: - |
1.697 | - | - | 0.974 | - | - | 0.723 | Mlig455_055632 {REF} {Length: 1861} {RNA1509_39396} {RNA1310_15009.2} {RNA815_22733} | |
19. | MligTC455_45580 | 42 | 0.88 | Mlig455_010918 | Neo: - Age: Down-Down-Down |
1.696 | - | - | - | 0.725 | 0.971 | - | Mlig455_010918 {REF} {Length: 2621} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=86.4]; Anti-sigma-K factor rskA [PF10099.11, score=25.8]} {Smed: dd_Smed_v6_16346_0_1, dd_Smed_v6_16346_0_1, [Score=78.6, Expect=5e-15]} {RNA1310_36429} {RNA815_37174} | |
20. | MligTC455_09224 | 21 | 0.43 | Mlig455_038078 | Neo: - Age: - |
1.691 | - | - | 0.737 | 0.954 | - | - | Mlig455_038078 {REF} {Length: 771} {Pfam: PAN domain [PF00024.28, score=28.0]} {RNA1509_46267} {RNA1310_51656} {RNA815_32275.1} | |
21. | MligTC455_43236 | 107 | 2.24 | Mlig455_039667 | Neo: - Age: Down-Down-Up |
CAMKK2 | 1.685 | - | - | 0.729 | 0.956 | - | - | Mlig455_039667 {REF} {Length: 2203} {Pfam: Protein kinase domain [PF00069.27, score=200.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=113.0]; Kinase-like [PF14531.8, score=26.6]} {Human: ENSG00000110931, CAMKK2, calcium/calmodulin dependent protein kinase kinase 2, [Score=381, Expect=9e-125]; ENSG00000004660, CAMKK1, calcium/calmodulin dependent protein kinase kinase 1, [Score=364, Expect=2e-118]} {Mouse: ENSMUSG00000029471, Camkk2, calcium/calmodulin-dependent protein kinase kinase 2, beta, [Score=374, Expect=5e-122]; ENSMUSG00000020785, Camkk1, calcium/calmodulin-dependent protein kinase kinase 1, alpha, [Score=359, Expect=1e-116]} {Dmel: FBgn0040056, CG17698, [Score=358, Expect=2e-114]} {Celegans: WBGene00000518, ckk-1, Calcium/calmodulin-dependent protein kinase kinase, [Score=363, Expect=1e-119]} {Smed: dd_Smed_v6_18437_0_1, dd_Smed_v6_18437_0_1, [Score=338, Expect=9e-108]} {RNA1310_35311.1} {RNA815_49857} |
22. | MligTC455_12032 | 92 | 1.91 | Mlig455_044477 | Neo: - Age: - |
KCNIP1 | 1.683 | - | - | - | 0.968 | 0.715 | - | Mlig455_044477 {REF} {Length: 1077} {Pfam: EF hand [PF00036.34, score=60.1]; EF-hand domain [PF13405.8, score=57.2]; EF-hand domain pair [PF13499.8, score=54.7]; EF-hand domain pair [PF13833.8, score=47.2]; EF hand [PF13202.8, score=43.0]} {Human: ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=169, Expect=9e-52]; ENSG00000120049, KCNIP2, potassium voltage-gated channel interacting protein 2, [Score=164, Expect=7e-49]} {Mouse: ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=170, Expect=2e-52]} {Dmel: FBgn0039380, CG5890, [Score=150, Expect=5e-45]} {Celegans: WBGene00008998, ncs-4, Neuronal Calcium Sensor family, [RH, Score=121, Expect=1e-33]} {Smed: dd_Smed_v6_9727_0_1, dd_Smed_v6_9727_0_1, [Score=163, Expect=6e-50]} {RNA1310_40826} {RNA815_29104} |
23. | MligTC455_32916 | 64 | 1.33 | Mlig455_068908 | Neo: - Age: - |
1.678 | - | 0.719 | - | 0.959 | - | - | Mlig455_068908 {REF} {Length: 1572} {RNA1509_32988} {RNA1310_50901} {RNA815_42442} | |
24. | MligTC455_54202 | 381 | 7.94 | Mlig455_006349 | Neo: - Age: logFC(26M/2M)=0.343 Region-specific R2: 5.916 Region-enriched R2: 5.229/0.00037 |
MYH6 | 1.665 | - | 0.951 | - | - | 0.714 | - | Mlig455_006349 {REF} {Length: 6943} {Pfam: Myosin head (motor domain) [PF00063.23, score=929.0]; Myosin tail [PF01576.21, score=591.7]; Myosin N-terminal SH3-like domain [PF02736.21, score=60.7]; Crescentin protein [PF19220.2, score=26.4]; Autophagy protein 16 (ATG16) [PF08614.13, score=20.3]; Macoilin family [PF09726.11, score=18.3]} {Human: ENSG00000197616, MYH6, myosin heavy chain 6, [RH, Score=2075, Expect=0.0]; ENSG00000092054, MYH7, myosin heavy chain 7, [RH, Score=2066, Expect=0.0]; ENSG00000125414, MYH2, myosin heavy chain 2, [RH, Score=2021, Expect=0.0]; ENSG00000109061, MYH1, myosin heavy chain 1, [RH, Score=2013, Expect=0.0]; ENSG00000133020, MYH8, myosin heavy chain 8, [RH, Score=2007, Expect=0.0]; ENSG00000264424, MYH4, myosin heavy chain 4, [RH, Score=1993, Expect=0.0]; ENSG00000109063, MYH3, myosin heavy chain 3, [RH, Score=1974, Expect=0.0]} {Mouse: ENSMUSG00000040752, Myh6, myosin, heavy polypeptide 6, cardiac muscle, alpha, [RH, Score=2076, Expect=0.0]; ENSMUSG00000053093, Myh7, myosin, heavy polypeptide 7, cardiac muscle, beta, [RH, Score=2063, Expect=0.0]; ENSMUSG00000057003, Myh4, myosin, heavy polypeptide 4, skeletal muscle, [RH, Score=2041, Expect=0.0]; ENSMUSG00000056328, Myh1, myosin, heavy polypeptide 1, skeletal muscle, adult, [RH, Score=2018, Expect=0.0]; ENSMUSG00000055775, Myh8, myosin, heavy polypeptide 8, skeletal muscle, perinatal, [RH, Score=2015, Expect=0.0]; ENSMUSG00000033196, Myh2, myosin, heavy polypeptide 2, skeletal muscle, adult, [RH, Score=2009, Expect=0.0]; ENSMUSG00000020908, Myh3, myosin, heavy polypeptide 3, skeletal muscle, embryonic, [RH, Score=1981, Expect=0.0]; ENSMUSG00000060180, Myh13, myosin, heavy polypeptide 13, skeletal muscle, [RH, Score=1979, Expect=0.0]} {Dmel: FBgn0264695, Mhc, Myosin heavy chain, [RH, Score=2100, Expect=0.0]} {Celegans: WBGene00019064, myo-5, MYOsin heavy chain structural genes, [RH, Score=1996, Expect=0.0]} {Smed: dd_Smed_v6_579_0_1, dd_Smed_v6_579_0_1, [RH, Score=2705, Expect=0.0]} {RNA1509_16048, RNA1509_54239, RNA1509_55838} {RNA1310_1388, RNA1509_16048, RNA1509_54239, RNA1509_55838} {RNA1509_16048, RNA1509_54239, RNA1509_55838, RNA815_129.1} |
25. | MligTC455_11311 | 134 | 2.8 | Mlig455_065288, Mlig455_065312 | Neo: - Age: - |
CA2 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_065288 {REF} {Length: 1945} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.23, score=230.8]} {Human: ENSG00000104267, CA2, carbonic anhydrase 2, [Score=193, Expect=7e-60]; ENSG00000185015, CA13, carbonic anhydrase 13, [Score=187, Expect=2e-57]} {Mouse: ENSMUSG00000027555, Car13, carbonic anhydrase 13, [Score=189, Expect=2e-58]; ENSMUSG00000031373, Car5b, carbonic anhydrase 5b, mitochondrial, [Score=184, Expect=9e-56]; ENSMUSG00000027562, Car2, carbonic anhydrase 2, [Score=181, Expect=2e-55]} {Dmel: FBgn0027844, CAH1, Carbonic anhydrase 1, [Score=191, Expect=3e-59]} {Celegans: WBGene00000283, cah-5, Putative carbonic anhydrase 5, [Score=129, Expect=6e-35]} {Smed: dd_Smed_v6_5784_0_1, dd_Smed_v6_5784_0_1, [Score=180, Expect=4e-55]} {RNA1509_32865} {RNA1310_39327} {RNA815_41545} Mlig455_065312 {REF} {Length: 2019} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.23, score=230.6]} {Human: ENSG00000104267, CA2, carbonic anhydrase 2, [Score=192, Expect=1e-59]; ENSG00000185015, CA13, carbonic anhydrase 13, [Score=187, Expect=1e-57]} {Mouse: ENSMUSG00000027555, Car13, carbonic anhydrase 13, [Score=189, Expect=2e-58]; ENSMUSG00000031373, Car5b, carbonic anhydrase 5b, mitochondrial, [Score=183, Expect=1e-55]; ENSMUSG00000027562, Car2, carbonic anhydrase 2, [Score=181, Expect=3e-55]} {Dmel: FBgn0027844, CAH1, Carbonic anhydrase 1, [Score=190, Expect=9e-59]} {Celegans: WBGene00000283, cah-5, Putative carbonic anhydrase 5, [Score=127, Expect=2e-34]} {Smed: dd_Smed_v6_5784_0_1, dd_Smed_v6_5784_0_1, [Score=179, Expect=6e-55]} {RNA1509_32865} {RNA1310_39327} {RNA815_41545} |
26. | MligTC455_18746 | 23 | 0.47 | Mlig455_024831 | Neo: - Age: - Region-enriched R4: 8.220/0.00001 Regeneration-depleted R4: -6.352 |
0.964 | - | - | - | 0.964 | - | - | Mlig455_024831 {REF} {Length: 1230} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=52.0, Expect=1e-07]} {RNA1509_9302} {RNA1310_672.1} {RNA815_6919} | |
27. | MligTC455_48401 | 46 | 0.95 | Mlig455_042260 | Neo: - Age: - |
NOTCH2 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_042260 {REF} {Length: 3775} {Pfam: EGF-like domain [PF00008.29, score=128.6]; Human growth factor-like EGF [PF12661.9, score=92.3]; LNR domain [PF00066.19, score=89.4]; Calcium-binding EGF domain [PF07645.17, score=46.1]; EGF-like domain [PF07974.15, score=21.6]; NOTCH protein [PF07684.14, score=20.9]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=287, Expect=2e-79]; ENSG00000148400, NOTCH1, notch 1, [Score=283, Expect=4e-78]; ENSG00000074181, NOTCH3, notch 3, [Score=276, Expect=5e-76]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=291, Expect=7e-81]; ENSMUSG00000027878, Notch2, notch 2, [Score=287, Expect=2e-79]; ENSMUSG00000038146, Notch3, notch 3, [Score=283, Expect=2e-78]} {Dmel: FBgn0004647, N, Notch, [Score=271, Expect=2e-74]} {Celegans: WBGene00003001, lin-12, [RH, Score=233, Expect=1e-62]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=272, Expect=3e-75]} {RNA1310_37322} {RNA815_20315} |
28. | MligTC455_50711 | 1833 | 38.18 | Mlig455_004969, Mlig455_046444 | Neo: Irradiation Age: Down-Up-Down |
0.962 | - | - | 0.962 | - | - | - | Mlig455_004969 {REF} {Length: 2543} {Pfam: HMG (high mobility group) box [PF00505.21, score=32.3]; Anti-sigma-K factor rskA [PF10099.11, score=20.6]} {RNA1509_8010} {RNA1310_8703} {RNA815_10872} Mlig455_046444 {REF} {Length: 2533} {Pfam: HMG (high mobility group) box [PF00505.21, score=32.3]; Anti-sigma-K factor rskA [PF10099.11, score=20.6]} {RNA1509_8010} {RNA1310_8703, RNA1509_8010} {RNA1509_8010, RNA815_10872} |
|
29. | MligTC455_51126 | 48 | 1.01 | Mlig455_036447 | Neo: - Age: - |
GLRA2 | 0.962 | - | 0.962 | - | - | - | - | Mlig455_036447 {REF} {Length: 2076} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=154.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=110.1]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=318, Expect=6e-103]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=316, Expect=5e-102]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=312, Expect=9e-101]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=318, Expect=4e-103]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=317, Expect=3e-102]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=310, Expect=8e-100]} {Dmel: FBgn0024963, GluClalpha, [Score=291, Expect=2e-92]} {Celegans: WBGene00020767, lgc-40, Ligand-Gated ion Channel, [RH, Score=260, Expect=2e-80]} {Smed: dd_Smed_v6_18238_0_1, dd_Smed_v6_18238_0_1, [Score=258, Expect=3e-80]} {RNA1310_34255} {RNA815_61641} |
30. | MligTC455_20810 | 107 | 2.24 | Mlig455_055633, Mlig455_066016 | Neo: - |
SIX6 | 0.961 | - | - | 0.961 | - | - | - | Mlig455_055633 {REF} {Length: 719} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=61.3]} {Human: ENSG00000184302, SIX6, SIX homeobox 6, [Score=157, Expect=3e-47]; ENSG00000138083, SIX3, SIX homeobox 3, [Score=154, Expect=8e-45]} {Mouse: ENSMUSG00000021099, Six6, sine oculis-related homeobox 6, [Score=156, Expect=7e-47]; ENSMUSG00000038805, Six3, sine oculis-related homeobox 3, [Score=154, Expect=7e-45]} {Dmel: FBgn0025360, Optix, [Score=139, Expect=2e-38]} {Celegans: WBGene00000453, ceh-32, Homeobox protein ceh-32, [Score=110, Expect=6e-28]} {Smed: dd_Smed_v6_11975_0_1, dd_Smed_v6_11975_0_1, [Score=162, Expect=3e-47]} {RNA1509_39396} {RNA1310_15009.1} {RNA815_16142} Mlig455_066016 {REF} {Length: 1888} {RNA1509_39396} {RNA1310_15009.2} {RNA815_22733} |
31. | MligTC455_49929 | 76 | 1.59 | Mlig455_001249, Mlig455_001253 | Neo: - Age: Down-Up-Up |
0.961 | - | - | - | 0.961 | - | - | Mlig455_001249 {REF} {Length: 984} {RNA1310_33799.1} {RNA815_47109} Mlig455_001253 {REF} {Length: 1260} {RNA1310_33799.1} {RNA815_45980} |
|
32. | MligTC455_00497 | 16 | 0.32 | Mlig455_024387 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_024387 {REF} {Length: 188} {NoTransDecoderORF} {RNA1509_15591} {RNA1310_91226} {RNA815_47873} | |
33. | MligTC455_34340 | 16 | 0.34 | Mlig455_024386 | Neo: - Age: Down-Up-Down |
0.96 | - | - | - | - | 0.960 | - | Mlig455_024386 {REF} {Length: 680} {Pfam: SH2 domain [PF00017.26, score=46.7]} {RNA1509_15591} {RNA1310_21284.1} {RNA815_47873} | |
34. | MligTC455_50710 | 916 | 19.08 | Mlig455_004973 | Neo: Irradiation |
0.959 | - | - | 0.959 | - | - | - | Mlig455_004973 {REF} {Length: 2155} {Pfam: HMG (high mobility group) box [PF00505.21, score=25.0]} {RNA1509_8010} {RNA1310_8703} {RNA815_10872} | |
35. | MligTC455_53305 | 76 | 1.58 | Mlig455_039152 | Neo: - Age: logFC(26M/2M)=-0.689 |
0.959 | - | - | - | - | 0.959 | - | Mlig455_039152 {REF} {Length: 1863} {Smed: dd_Smed_v6_31564_0_1, dd_Smed_v6_31564_0_1, [Score=49.3, Expect=2e-06]} {RNA1509_24214} {RNA1310_21641} {RNA815_11396} | |
36. | MligTC455_44614 | 545 | 11.35 | Mlig455_052863 | Neo: - Age: - Region-enriched R2: 3.641/0.02102 |
0.956 | - | - | - | 0.956 | - | - | Mlig455_052863 {REF} {Length: 918} {RNA1509_30662} {RNA1310_67855.1} {RNA815_34213.1} | |
37. | MligTC455_17612 | 38 | 0.78 | Mlig455_057835 | Neo: - Age: - |
ADRB2 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_057835 {REF} {Length: 2257} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=166.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=20.1]} {Human: ENSG00000169252, ADRB2, adrenoceptor beta 2, [Score=118, Expect=1e-28]} {Mouse: ENSMUSG00000045730, Adrb2, adrenergic receptor, beta 2, [Score=118, Expect=6e-29]} {Dmel: FBgn0004841, TkR86C, Tachykinin-like receptor at 86C, [Score=129, Expect=4e-32]} {Celegans: WBGene00022004, npr-22, NeuroPeptide Receptor family, [Score=116, Expect=2e-28]} {Smed: dd_Smed_v6_15854_0_1, dd_Smed_v6_15854_0_1, [RH, Score=229, Expect=1e-70]} {RNA1310_66275} {RNA815_49974} |
38. | MligTC455_38369 | 100 | 2.08 | Mlig455_026465 | Neo: - Age: - |
SSUH2 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_026465 {REF} {Length: 1913} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [RH, Score=238, Expect=2e-74]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [RH, Score=200, Expect=2e-60]} {Celegans: WBGene00013455, ssu-2, Suppressor of Stomatin mutant Uncoordination, [Score=122, Expect=4e-31]} {RNA1509_6425} {RNA1310_32434} {RNA815_16161} |
39. | MligTC455_30325 | 15 | 0.31 | Mlig455_043329 | Neo: - Age: - |
NYNRIN | 0.953 | - | - | 0.953 | - | - | - | Mlig455_043329 {REF} {Length: 3260} {Pfam: Integrase zinc binding domain [PF17921.3, score=79.6]; Integrase core domain [PF00665.28, score=56.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=118, Expect=7e-27]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=122, Expect=3e-28]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=207, Expect=1e-59]} {RNA1509_29299} {RNA1310_18534} {RNA815_7746} |
40. | MligTC455_30326 | 16 | 0.34 | Mlig455_043331 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_043331 {REF} {Length: 1862} {RNA1509_29299} {RNA1310_70970} {RNA815_35302} | |
41. | MligTC455_32720 | 105 | 2.19 | Mlig455_036630, Mlig455_036706 | Neo: - Age: - |
RAC2 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_036630 {REF} {Length: 2660} {Pfam: Ras family [PF00071.24, score=174.4]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=79.3]; ADP-ribosylation factor family [PF00025.23, score=24.8]} {Human: ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=255, Expect=2e-85]; ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=254, Expect=6e-85]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=248, Expect=2e-82]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=254, Expect=4e-85]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=253, Expect=6e-85]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=248, Expect=1e-82]} {Dmel: FBgn0010333, Rac1, [Score=251, Expect=4e-84]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=258, Expect=6e-87]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=241, Expect=2e-80]} {RNA1509_56536} {RNA1310_27814, RNA1509_56536} {RNA1509_56536, RNA815_15553} Mlig455_036706 {REF} {Length: 2754} {Pfam: Ras family [PF00071.24, score=174.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=79.5]; ADP-ribosylation factor family [PF00025.23, score=25.0]} {Human: ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=255, Expect=1e-85]; ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=253, Expect=5e-85]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=247, Expect=2e-82]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=253, Expect=3e-85]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=253, Expect=5e-85]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=247, Expect=1e-82]} {Dmel: FBgn0010333, Rac1, [Score=251, Expect=3e-84]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=258, Expect=4e-87]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=241, Expect=1e-80]} {RNA1509_56536} {RNA1310_27814} {RNA815_15553} |
42. | MligTC455_10787 | 46 | 0.96 | Mlig455_052810 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_052810 {REF} {Length: 1287} {Pfam: F5/8 type C domain [PF00754.27, score=21.9]} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [RH, Score=56.2, Expect=2e-09]} {RNA1509_47815} {RNA1310_114361} {RNA815_11379} | |
43. | MligTC455_42130 | 49 | 1.02 | Mlig455_031418 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_031418 {REF} {Length: 1285} {RNA1310_89057} | |
44. | MligTC455_37440 | 78 | 1.62 | Mlig455_019008 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_019008 {REF} {Length: 1896} {RNA1509_49181} {RNA1310_31711} {RNA815_17406} | |
45. | MligTC455_05241 | 230 | 4.8 | Mlig455_003204 | Neo: - Age: - |
MX2 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_003204 {REF} {Length: 2722} {Pfam: Dynamin central region [PF01031.22, score=164.4]; Dynamin family [PF00350.25, score=133.5]; Dynamin GTPase effector domain [PF02212.20, score=47.0]; 50S ribosome-binding GTPase [PF01926.25, score=21.1]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [RH, Score=350, Expect=2e-110]; ENSG00000157601, MX1, MX dynamin like GTPase 1, [RH, Score=342, Expect=3e-108]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [RH, Score=351, Expect=7e-112]} {Dmel: FBgn0003392, shi, shibire, [Score=181, Expect=4e-48]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=168, Expect=8e-44]} {Smed: dd_Smed_v6_6863_0_1, dd_Smed_v6_6863_0_1, [Score=179, Expect=2e-47]} {RNA1509_29560, RNA1509_43517} {RNA1310_8317.2, RNA1509_29560, RNA1509_43517} {RNA1509_29560, RNA1509_43517, RNA815_3104.1} |
46. | MligTC455_22965 | 433 | 9.03 | Mlig455_019042 | Neo: - Age: Down-Down-Up |
0.95 | - | - | 0.950 | - | - | - | Mlig455_019042 {REF} {Length: 1514} {Pfam: Sleepless protein [PF17064.7, score=26.9]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [RH, Score=69.3, Expect=1e-15]} {RNA1509_27313, RNA1509_54222} {RNA1310_27569.1, RNA1509_54222} {RNA1509_54222, RNA815_11340} |