TomoSeq data search

Data search

Results for MligTC455_13937

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_13937	387	8.07	Mlig455_028006, Mlig455_028036	Neo: Irradiation Age: - Region-enriched R5: 2.460/0.00025	CDC6	Mlig455_028006 {REF} {Length: 2767} {TRANSSPLICED} {Pfam: CDC6, C terminal winged helix domain [PF09079.13, score=33.5]; AAA domain [PF13401.8, score=28.9]; AAA ATPase domain [PF13191.8, score=26.6]; AAA lid domain [PF17872.3, score=21.5]; AAA domain [PF13245.8, score=21.4]; Type II/IV secretion system protein [PF00437.22, score=19.3]} {Human: ENSG00000094804, CDC6, cell division cycle 6, [Score=110, Expect=3e-25]} {Mouse: ENSMUSG00000017499, Cdc6, cell division cycle 6, [Score=115, Expect=6e-27]} {Dmel: FBgn0035918, Cdc6, [Score=93.6, Expect=5e-20]} {Smed: dd_Smed_v6_18778_0_1, dd_Smed_v6_18778_0_1, [Score=92.4, Expect=5e-20]} {RNA1509_55655} {RNA1310_35548} {RNA815_7333.1} Mlig455_028036 {REF} {Length: 3756} {TRANSSPLICED} {Pfam: AAA domain [PF13401.8, score=42.2]; AAA ATPase domain [PF13191.8, score=37.7]; CDC6, C terminal winged helix domain [PF09079.13, score=33.9]; AAA domain [PF13245.8, score=27.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=24.5]; AAA lid domain [PF17872.3, score=21.2]; NACHT domain [PF05729.14, score=20.3]; Type II/IV secretion system protein [PF00437.22, score=18.2]} {Human: ENSG00000094804, CDC6, cell division cycle 6, [Score=132, Expect=2e-32]} {Mouse: ENSMUSG00000017499, Cdc6, cell division cycle 6, [Score=138, Expect=1e-34]} {Dmel: FBgn0035918, Cdc6, [Score=116, Expect=2e-27]} {Celegans: WBGene00000382, cdc-6, Cell Division Cycle related, [Score=112, Expect=2e-26]} {Smed: dd_Smed_v6_18778_0_1, dd_Smed_v6_18778_0_1, [Score=116, Expect=5e-28]} {RNA1509_16975, RNA1509_55655} {RNA1310_16898.1, RNA1509_16975, RNA1509_55655} {RNA1509_16975, RNA1509_55655, RNA815_7333.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_13937

387

8.07

Mlig455_028006, Mlig455_028036

Neo: Irradiation

Age: -

Region-enriched R5: 2.460/0.00025

CDC6

Mlig455_028006 {REF} {Length: 2767} {TRANSSPLICED} {Pfam: CDC6, C terminal winged helix domain [PF09079.13, score=33.5]; AAA domain [PF13401.8, score=28.9]; AAA ATPase domain [PF13191.8, score=26.6]; AAA lid domain [PF17872.3, score=21.5]; AAA domain [PF13245.8, score=21.4]; Type II/IV secretion system protein [PF00437.22, score=19.3]} {Human: ENSG00000094804, CDC6, cell division cycle 6, [Score=110, Expect=3e-25]} {Mouse: ENSMUSG00000017499, Cdc6, cell division cycle 6, [Score=115, Expect=6e-27]} {Dmel: FBgn0035918, Cdc6, [Score=93.6, Expect=5e-20]} {Smed: dd_Smed_v6_18778_0_1, dd_Smed_v6_18778_0_1, [Score=92.4, Expect=5e-20]} {RNA1509_55655} {RNA1310_35548} {RNA815_7333.1}

Mlig455_028036 {REF} {Length: 3756} {TRANSSPLICED} {Pfam: AAA domain [PF13401.8, score=42.2]; AAA ATPase domain [PF13191.8, score=37.7]; CDC6, C terminal winged helix domain [PF09079.13, score=33.9]; AAA domain [PF13245.8, score=27.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=24.5]; AAA lid domain [PF17872.3, score=21.2]; NACHT domain [PF05729.14, score=20.3]; Type II/IV secretion system protein [PF00437.22, score=18.2]} {Human: ENSG00000094804, CDC6, cell division cycle 6, [Score=132, Expect=2e-32]} {Mouse: ENSMUSG00000017499, Cdc6, cell division cycle 6, [Score=138, Expect=1e-34]} {Dmel: FBgn0035918, Cdc6, [Score=116, Expect=2e-27]} {Celegans: WBGene00000382, cdc-6, Cell Division Cycle related, [Score=112, Expect=2e-26]} {Smed: dd_Smed_v6_18778_0_1, dd_Smed_v6_18778_0_1, [Score=116, Expect=5e-28]} {RNA1509_16975, RNA1509_55655} {RNA1310_16898.1, RNA1509_16975, RNA1509_55655} {RNA1509_16975, RNA1509_55655, RNA815_7333.1}

Cumulative graph for MligTC455_13937

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.284	3.561	0.89621	1.00000
RegionR2	1.537	3.561	0.08821	0.36490
RegionR3	0.637	3.561	0.38673	0.91826
RegionR4	-0.28	3.561	0.88839	1.00000
RegionR5	2.46	3.561	0.00001	0.00025
RegionR6	0.938	3.561	0.20578	0.78038
RegionR7	1.545	3.561	0.06696	0.49716
RegionR8	-6.553	3.561	0.01052	0.19422

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.202	3.561	0.31067	1.00000
RegenerationR2	-0.249	3.561	0.71991	0.96301
RegenerationR3	0.783	3.561	0.28940	0.72135
RegenerationR4	0.583	3.561	0.44443	0.83914
RegenerationR5	-0.292	3.561	0.65866	0.93538
RegenerationR6	1.221	3.561	0.08216	0.35787
RegenerationBL	3.458	3.561	0.00374	0.05405
RegenerationTP	3.8	3.561	0.02442	0.26488

Genes with expression patterns similar to MligTC455_13937

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_13937	387	8.07	Mlig455_028006, Mlig455_028036	Neo: Irradiation Age: - Region-enriched R5: 2.460/0.00025	CDC6	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_028006 {REF} {Length: 2767} {TRANSSPLICED} {Pfam: CDC6, C terminal winged helix domain [PF09079.13, score=33.5]; AAA domain [PF13401.8, score=28.9]; AAA ATPase domain [PF13191.8, score=26.6]; AAA lid domain [PF17872.3, score=21.5]; AAA domain [PF13245.8, score=21.4]; Type II/IV secretion system protein [PF00437.22, score=19.3]} {Human: ENSG00000094804, CDC6, cell division cycle 6, [Score=110, Expect=3e-25]} {Mouse: ENSMUSG00000017499, Cdc6, cell division cycle 6, [Score=115, Expect=6e-27]} {Dmel: FBgn0035918, Cdc6, [Score=93.6, Expect=5e-20]} {Smed: dd_Smed_v6_18778_0_1, dd_Smed_v6_18778_0_1, [Score=92.4, Expect=5e-20]} {RNA1509_55655} {RNA1310_35548} {RNA815_7333.1} Mlig455_028036 {REF} {Length: 3756} {TRANSSPLICED} {Pfam: AAA domain [PF13401.8, score=42.2]; AAA ATPase domain [PF13191.8, score=37.7]; CDC6, C terminal winged helix domain [PF09079.13, score=33.9]; AAA domain [PF13245.8, score=27.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=24.5]; AAA lid domain [PF17872.3, score=21.2]; NACHT domain [PF05729.14, score=20.3]; Type II/IV secretion system protein [PF00437.22, score=18.2]} {Human: ENSG00000094804, CDC6, cell division cycle 6, [Score=132, Expect=2e-32]} {Mouse: ENSMUSG00000017499, Cdc6, cell division cycle 6, [Score=138, Expect=1e-34]} {Dmel: FBgn0035918, Cdc6, [Score=116, Expect=2e-27]} {Celegans: WBGene00000382, cdc-6, Cell Division Cycle related, [Score=112, Expect=2e-26]} {Smed: dd_Smed_v6_18778_0_1, dd_Smed_v6_18778_0_1, [Score=116, Expect=5e-28]} {RNA1509_16975, RNA1509_55655} {RNA1310_16898.1, RNA1509_16975, RNA1509_55655} {RNA1509_16975, RNA1509_55655, RNA815_7333.1}
2.	MligTC455_26728	326	6.8	Mlig455_070831	Neo: Int S/G2/M Age: - Region-enriched R5: 2.171/0.00634	NUP205	1.689	-	0.734	-	-	-	0.955	Mlig455_070831 {REF} {Length: 7040} {TRANSSPLICED} {Pfam: Nuclear pore complex scaffold, nucleoporins 186/192/205 [PF11894.10, score=517.5]} {Human: ENSG00000155561, NUP205, nucleoporin 205, [RH, Score=580, Expect=1e-171]} {Mouse: ENSMUSG00000038759, Nup205, nucleoporin 205, [Score=565, Expect=3e-166]} {Dmel: FBgn0031078, Nup205, Nucleoporin 205kD, [Score=254, Expect=3e-67]} {Celegans: WBGene00003789, npp-3, Nuclear Pore complex Protein, [Score=84.7, Expect=7e-16]} {Smed: dd_Smed_v6_3533_0_1, dd_Smed_v6_3533_0_1, [Score=369, Expect=7e-103]} {RNA1509_7576} {RNA1310_395.1} {RNA815_27319}
3.	MligTC455_52552	18866	393.05	Mlig455_060451, Mlig455_060494	Neo: Int S/G2/M Age: Down-Down-Down, logFC(26M/2M)=9.276	RPL36	1.664	-	-	-	0.709	0.955	-	Mlig455_060451 {REF} {Length: 488} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=136.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=118, Expect=2e-35]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=118, Expect=1e-35]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=105, Expect=8e-31]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=101, Expect=4e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=108, Expect=2e-32]} {RNA1509_52420, RNA1509_7567} {RNA1310_72529.3, RNA1509_7567} {RNA1509_7567, RNA815_37483} Mlig455_060494 {REF} {Length: 490} {TRANSSPLICED} {Pfam: Ribosomal protein L36e [PF01158.20, score=136.7]} {Human: ENSG00000130255, RPL36, ribosomal protein L36, [RH, Score=118, Expect=2e-35]} {Mouse: ENSMUSG00000057863, Rpl36, ribosomal protein L36, [RH, Score=118, Expect=1e-35]} {Dmel: FBgn0002579, RpL36, Ribosomal protein L36, [RH, Score=105, Expect=8e-31]} {Celegans: WBGene00004450, rpl-36, 60S ribosomal protein L36, [RH, Score=101, Expect=4e-29]} {Smed: dd_Smed_v6_105_0_1, dd_Smed_v6_105_0_1, [RH, Score=108, Expect=2e-32]} {RNA1509_11076, RNA1509_4929, RNA1509_52420, RNA1509_5790} {RNA1310_72529.1, RNA1509_11076, RNA1509_4929, RNA1509_52420, RNA1509_5790} {RNA1509_11076, RNA1509_4929, RNA1509_52420, RNA1509_5790, RNA815_37483}
4.	MligTC455_44796	322	6.71	Mlig455_016168	Neo: Int S/G2/M Age: - Region-enriched R5: 1.366/0.01937	UBASH3A	0.967	-	-	-	-	-	0.967	Mlig455_016168 {REF} {Length: 2883} {Human: ENSG00000160185, UBASH3A, ubiquitin associated and SH3 domain containing A, [Score=97.1, Expect=3e-20]; ENSG00000154127, UBASH3B, ubiquitin associated and SH3 domain containing B, [Score=95.5, Expect=1e-19]} {Mouse: ENSMUSG00000032020, Ubash3b, ubiquitin associated and SH3 domain containing, B, [Score=97.8, Expect=7e-21]; ENSMUSG00000042345, Ubash3a, ubiquitin associated and SH3 domain containing, A, [Score=95.1, Expect=1e-19]} {Dmel: FBgn0039137, CG13604, [Score=108, Expect=3e-24]} {Celegans: WBGene00009962, F53B6.7, [Score=68.6, Expect=3e-12]} {Smed: dd_Smed_v6_12024_0_1, dd_Smed_v6_12024_0_1, [Score=118, Expect=2e-27]} {RNA1509_26013} {RNA1310_1022.2} {RNA815_2099}
5.	MligTC455_13656	118	2.45	Mlig455_027799	Neo: Irradiation Age: Down-Up-Down Region-enriched R6: 2.903/0.03822		0.963	-	-	-	-	-	0.963	Mlig455_027799 {REF} {Length: 4703} {RNA1509_57337} {RNA1310_9265} {RNA815_13115}
6.	MligTC455_17621	97	2.02	Mlig455_042086	Neo: Int S/G2/M Age: Up-Up-Down		0.961	-	-	0.961	-	-	-	Mlig455_042086 {REF} {Length: 2172} {NoTransDecoderORF} {RNA1509_18737} {RNA1310_4779.2, RNA1509_18737} {RNA1509_18737, RNA815_11780}
7.	MligTC455_15556	103	2.14	Mlig455_046171	Neo: - Age: - Region-enriched R5: 3.292/0.00059		0.954	-	0.954	-	-	-	-	Mlig455_046171 {REF} {Length: 2165} {TRANSSPLICED} {RNA1509_37300} {RNA1310_15647.1} {RNA815_18831.1}
8.	MligTC455_32132	166	3.46	Mlig455_055925	Neo: Int S/G2/M Age: -	NCBP3	0.95	-	-	-	-	-	0.950	Mlig455_055925 {REF} {Length: 3346} {TRANSSPLICED} {Pfam: Nuclear cap-binding protein subunit 3 [PF10309.11, score=58.0]} {Human: ENSG00000074356, NCBP3, nuclear cap binding subunit 3, [Score=59.3, Expect=1e-08]} {Mouse: ENSMUSG00000020783, Ncbp3, nuclear cap binding subunit 3, [Score=58.5, Expect=1e-08]} {Smed: dd_Smed_v6_4238_0_1, dd_Smed_v6_4238_0_1, [RH, Score=65.5, Expect=1e-11]} {RNA1509_30857} {RNA1310_15375} {RNA815_7572}