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Results for MligTC455_53064

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53064 33 0.69 Mlig455_038540

Neo: -

Age: -

 Mlig455_038540 {REF} {Length: 284} {NoTransDecoderORF} {RNA1310_134458}

Cumulative graph for MligTC455_53064

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.835 1.131 0.99954 1.00000
RegionR2 2.195 1.131 0.11994 0.42893
RegionR3 0.923 1.131 0.42341 0.94563
RegionR4 0.869 1.131 0.49823 0.82500
RegionR5 -0.216 1.131 0.81632 1.00000
RegionR6 0.529 1.131 0.58979 1.00000
RegionR7 -2.93 1.131 0.99977 1.00000
RegionR8 2.464 1.131 0.17892 0.76075

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.731 1.131 0.99999 1.00000
RegenerationR2 -1.04 1.131 0.27208 0.71755
RegenerationR3 -0.782 1.131 0.48867 0.85377
RegenerationR4 -4.276 1.131 0.00081 0.03054
RegenerationR5 -0.808 1.131 0.43845 0.82331
RegenerationR6 0.127 1.131 0.94427 1.00000
RegenerationBL -2.854 1.131 0.99975 1.00000
RegenerationTP 1.451 1.131 0.45909 0.87324


Genes with expression patterns similar to MligTC455_53064

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53064 33 0.69 Mlig455_038540

Neo: -

Age: -

 3 1.000 1.000 - - 1.000 - Mlig455_038540 {REF} {Length: 284} {NoTransDecoderORF} {RNA1310_134458}
2. MligTC455_53176 54 1.13 Mlig455_051303

Neo: -

Age: -

Region-enriched R2: 4.924/0.00950

 0.977 - - - - 0.977 - Mlig455_051303 {REF} {Length: 1642} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=25.6]} {Dmel: FBgn0083971, CG34135, [RH, Score=61.6, Expect=7e-11]} {RNA1310_56013}
3. MligTC455_19912 180 3.75 Mlig455_035062, Mlig455_035081

Neo: -

Age: -

Region-enriched R2: 3.574/0.00043

Regeneration-upregulated R6: 3.449

Regeneration-enriched R6: 3.449

 SOX2 0.975 - - - - 0.975 -

Mlig455_035062 {REF} {Length: 2855} {Pfam: HMG (high mobility group) box [PF00505.21, score=93.6]; HMG-box domain [PF09011.12, score=43.3]; SOX transcription factor [PF12336.10, score=31.1]} {Human: ENSG00000181449, SOX2, SRY-box 2, [Score=182, Expect=7e-53]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [RH, Score=182, Expect=3e-53]} {Dmel: FBgn0029123, SoxN, SoxNeuro, [RH, Score=168, Expect=6e-45]} {Celegans: WBGene00004949, sox-2, Transcription factor sox-2, [RH, Score=174, Expect=1e-50]} {Smed: dd_Smed_v6_13215_0_1, dd_Smed_v6_13215_0_1, [RH, Score=161, Expect=2e-43]} {RNA1509_11450} {RNA1310_17800.1} {RNA815_36848}

Mlig455_035081 {REF} {Length: 2804} {Pfam: HMG (high mobility group) box [PF00505.21, score=93.8]; HMG-box domain [PF09011.12, score=41.9]; SOX transcription factor [PF12336.10, score=30.8]} {Human: ENSG00000181449, SOX2, SRY-box 2, [Score=182, Expect=5e-53]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [RH, Score=183, Expect=3e-53]} {Dmel: FBgn0029123, SoxN, SoxNeuro, [RH, Score=171, Expect=1e-45]} {Celegans: WBGene00004949, sox-2, Transcription factor sox-2, [RH, Score=174, Expect=9e-51]} {Smed: dd_Smed_v6_13215_0_1, dd_Smed_v6_13215_0_1, [RH, Score=161, Expect=2e-43]} {RNA1509_11450} {RNA1310_17800.1} {RNA815_36848}
4. MligTC455_16598 35 0.73 Mlig455_020223

Neo: -

Age: Up-Down-Up

 SLC32A1 0.972 - - - - 0.972 - Mlig455_020223 {REF} {Length: 3130} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=268.0]} {Human: ENSG00000101438, SLC32A1, solute carrier family 32 member 1, [RH, Score=370, Expect=1e-121]} {Mouse: ENSMUSG00000037771, Slc32a1, solute carrier family 32 (GABA vesicular transporter), member 1, [RH, Score=376, Expect=4e-124]} {Dmel: FBgn0033911, VGAT, Vesicular GABA Transporter, [RH, Score=407, Expect=6e-136]} {Celegans: WBGene00006783, unc-47, Vesicular GABA transporter, [RH, Score=374, Expect=2e-124]} {Smed: dd_Smed_v6_13324_0_1, dd_Smed_v6_13324_0_1, [Score=176, Expect=3e-49]} {RNA1509_41798} {RNA1310_63541} {RNA815_44591}
5. MligTC455_20069 30 0.62 Mlig455_025889

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_025889 {REF} {Length: 776} {NoTransDecoderORF} {RNA1310_17558}
6. MligTC455_14703 29 0.6 Mlig455_031744

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_031744 {REF} {Length: 568} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45985} {RNA1310_6194.2} {RNA815_4662.1}
7. MligTC455_28654 43 0.9 Mlig455_035618, Mlig455_048294

Neo: -

Age: Up-Down-Up

 RNF213 0.955 - - - - 0.955 -

Mlig455_035618 {REF} {Length: 868} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=97.1, Expect=3e-24]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=92.0, Expect=1e-22]} {RNA1509_1262} {RNA1310_20} {RNA815_15}

Mlig455_048294 {REF} {Length: 12677} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=28.5]; AAA domain (dynein-related subfamily) [PF07728.16, score=23.9]; P-loop containing dynein motor region [PF12775.9, score=21.1]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=832, Expect=0.0]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=808, Expect=0.0]} {RNA1509_1262} {RNA1310_22} {RNA815_15}
8. MligTC455_07864 19 0.39 Mlig455_015708

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_015708 {REF} {Length: 103} {NoTransDecoderORF} {RNA1509_59817} {RNA1310_95542} {RNA815_43072}
9. MligTC455_42747 160 3.33 Mlig455_024388, Mlig455_024501

Neo: -

Age: -

 0.953 - - - - 0.953 -

Mlig455_024388 {REF} {Length: 758} {Smed: dd_Smed_v6_512_0_1, dd_Smed_v6_512_0_1, [Score=44.3, Expect=7e-07]} {RNA1310_50230}

Mlig455_024501 {REF} {Length: 859} {Smed: dd_Smed_v6_512_0_2, dd_Smed_v6_512_0_2, [Score=44.7, Expect=3e-07]} {RNA1310_50230}
10. MligTC455_08898 44 0.91 Mlig455_023398, Mlig455_045568

Neo: -

Age: -

 PRR9 0.952 - - - - 0.952 -

Mlig455_023398 {REF} {Length: 1264} {Pfam: Cryptococcal mannosyltransferase 1 [PF11735.10, score=27.2]} {RNA1509_37639} {RNA1310_23440} {RNA815_10032}

Mlig455_045568 {REF} {Length: 8230} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.2, Expect=2e-06]} {RNA1509_37639} {RNA1310_23440, RNA1509_37639} {RNA1509_37639, RNA815_10032}
11. MligTC455_01692 13 0.27 Mlig455_012275

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_012275 {REF} {Length: 1467} {NoTransDecoderORF} {RNA1509_39047} {RNA1310_143193} {RNA815_57966}

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