TomoSeq data search

Data search

Results for MligTC455_16598

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16598

35

0.73

Mlig455_020223

Neo: -

Age: Up-Down-Up

SLC32A1

Mlig455_020223 {REF} {Length: 3130} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=268.0]} {Human: ENSG00000101438, SLC32A1, solute carrier family 32 member 1, [RH, Score=370, Expect=1e-121]} {Mouse: ENSMUSG00000037771, Slc32a1, solute carrier family 32 (GABA vesicular transporter), member 1, [RH, Score=376, Expect=4e-124]} {Dmel: FBgn0033911, VGAT, Vesicular GABA Transporter, [RH, Score=407, Expect=6e-136]} {Celegans: WBGene00006783, unc-47, Vesicular GABA transporter, [RH, Score=374, Expect=2e-124]} {Smed: dd_Smed_v6_13324_0_1, dd_Smed_v6_13324_0_1, [Score=176, Expect=3e-49]} {RNA1509_41798} {RNA1310_63541} {RNA815_44591}

Cumulative graph for MligTC455_16598

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.366	0.777	0.99947	1.00000
RegionR2	1.917	0.777	0.10821	0.40601
RegionR3	-2.431	0.777	1.00000	1.00000
RegionR4	-3.049	0.777	0.99953	1.00000
RegionR5	-3.266	0.777	0.99951	1.00000
RegionR6	3.219	0.777	0.05016	0.41912
RegionR7	4.916	0.777	0.00819	0.15175
RegionR8	0.059	0.777	0.99998	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.201	0.777	0.99981	1.00000
RegenerationR2	0.57	0.777	0.92697	1.00000
RegenerationR3	2.654	0.777	0.25134	0.68565
RegenerationR4	0.409	0.777	0.99973	1.00000
RegenerationR5	1.542	0.777	0.34905	0.76377
RegenerationR6	-1.699	0.777	0.39971	0.73711
RegenerationBL	-4.432	0.777	0.99985	1.00000
RegenerationTP	1.924	0.777	0.55213	0.93467

Genes with expression patterns similar to MligTC455_16598

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16598	35	0.73	Mlig455_020223	Neo: - Age: Up-Down-Up	SLC32A1	2	1.000	-	-	-	1.000	-	Mlig455_020223 {REF} {Length: 3130} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=268.0]} {Human: ENSG00000101438, SLC32A1, solute carrier family 32 member 1, [RH, Score=370, Expect=1e-121]} {Mouse: ENSMUSG00000037771, Slc32a1, solute carrier family 32 (GABA vesicular transporter), member 1, [RH, Score=376, Expect=4e-124]} {Dmel: FBgn0033911, VGAT, Vesicular GABA Transporter, [RH, Score=407, Expect=6e-136]} {Celegans: WBGene00006783, unc-47, Vesicular GABA transporter, [RH, Score=374, Expect=2e-124]} {Smed: dd_Smed_v6_13324_0_1, dd_Smed_v6_13324_0_1, [Score=176, Expect=3e-49]} {RNA1509_41798} {RNA1310_63541} {RNA815_44591}
2.	MligTC455_18504	85	1.78	Mlig455_015015, Mlig455_038638	Neo: - Age: -		1.676	0.966	-	-	-	0.710	-	Mlig455_015015 {REF} {Length: 1382} {NoTransDecoderORF} {RNA1509_10728} {RNA1310_102527} {RNA815_20199} Mlig455_038638 {REF} {Length: 3970} {RNA1509_10728} {RNA1310_102527} {RNA815_58474}
3.	MligTC455_52206	34	0.72	Mlig455_000399	Neo: - Age: Up-Down-Down		0.977	0.977	-	-	-	-	-	Mlig455_000399 {REF} {Length: 2204} {RNA1310_72345} {RNA815_64104}
4.	MligTC455_34853	23	0.47	Mlig455_045034	Neo: - Age: -		0.973	0.973	-	-	-	-	-	Mlig455_045034 {REF} {Length: 2444} {RNA1310_85929} {RNA815_43650}
5.	MligTC455_53064	33	0.69	Mlig455_038540	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_038540 {REF} {Length: 284} {NoTransDecoderORF} {RNA1310_134458}
6.	MligTC455_54054	225	4.69	Mlig455_057798	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.674		0.967	-	-	-	-	0.967	-	Mlig455_057798 {REF} {Length: 521} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48165} {RNA1310_29299.1} {RNA815_15457}
7.	MligTC455_09804	16	0.33	Mlig455_035712	Neo: - Age: -	GABBR2	0.965	-	-	-	-	0.965	-	Mlig455_035712 {REF} {Length: 3935} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=146.8]; Receptor family ligand binding region [PF01094.30, score=122.7]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=233, Expect=3e-65]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=232, Expect=7e-65]} {Dmel: FBgn0260446, GABA-B-R1, metabotropic GABA-B receptor subtype 1, [Score=214, Expect=3e-59]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=192, Expect=8e-52]} {Smed: dd_Smed_v6_51663_0_1, dd_Smed_v6_51663_0_1, [Score=133, Expect=8e-35]} {RNA1509_13394} {RNA1310_65839}
8.	MligTC455_16005	97	2.02	Mlig455_018551, Mlig455_019423, Mlig455_058389	Neo: - Age: -		0.957	0.957	-	-	-	-	-	Mlig455_018551 {REF} {Length: 3430} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.1]} {RNA1509_42342} {RNA1310_4557} {RNA815_16034.1} Mlig455_019423 {REF} {Length: 2545} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.1]} {RNA1509_42342} {RNA1310_4557} {RNA815_16034.1} Mlig455_058389 {REF} {Length: 3494} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.1]} {RNA1509_42342} {RNA1310_4557} {RNA815_16034.1}
9.	MligTC455_22737	119	2.47	Mlig455_057775	Neo: - Age: Down-Up-Down Region-enriched R6: 5.005/0.00000 Region-enriched R7: 4.876/0.00000 Regeneration-downregulated R6: -7.253 Regeneration-depleted R6: -7.253	MMEL1	0.955	0.955	-	-	-	-	-	Mlig455_057775 {REF} {Length: 3495} {Pfam: Peptidase family M13 [PF01431.23, score=134.6]; Peptidase family M13 [PF05649.15, score=84.7]} {Human: ENSG00000277131, MMEL1, membrane metalloendopeptidase like 1, [Score=164, Expect=1e-41]; ENSG00000142606, MMEL1, membrane metalloendopeptidase like 1, [Score=164, Expect=1e-41]} {Mouse: ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=154, Expect=3e-38]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=152, Expect=4e-38]; ENSMUSG00000027820, Mme, membrane metallo endopeptidase, [Score=150, Expect=3e-37]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=138, Expect=2e-33]} {Celegans: WBGene00020230, nep-2, Neprilysin-2, [Score=156, Expect=2e-39]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=148, Expect=6e-37]} {RNA1509_47798} {RNA1310_6773} {RNA815_4414}
10.	MligTC455_06326	126	2.62	Mlig455_044797	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_044797 {REF} {Length: 1074} {NoTransDecoderORF} {RNA1509_26149} {RNA1310_52675} {RNA815_28400}
11.	MligTC455_39025	11	0.22	Mlig455_042672	Neo: - Age: -	DVL3	0.952	-	-	-	-	0.952	-	Mlig455_042672 {REF} {Length: 1896} {Pfam: DIX domain [PF00778.19, score=105.4]; Dishevelled specific domain [PF02377.17, score=87.9]; PDZ domain [PF00595.26, score=62.1]; Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) [PF00610.23, score=58.7]; PDZ domain [PF17820.3, score=28.1]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=18.8]} {Human: ENSG00000161202, DVL3, dishevelled segment polarity protein 3, [RH, Score=448, Expect=4e-147]} {Mouse: ENSMUSG00000003233, Dvl3, dishevelled segment polarity protein 3, [RH, Score=447, Expect=7e-147]} {Dmel: FBgn0000499, dsh, dishevelled, [RH, Score=286, Expect=2e-86]} {Celegans: WBGene00001101, dsh-1, DiSHevelled related, [RH, Score=297, Expect=5e-90]} {Smed: dd_Smed_v6_8730_0_1, dd_Smed_v6_8730_0_1, [Score=551, Expect=0.0]} {RNA1509_56007} {RNA1310_10157} {RNA815_21502}
12.	MligTC455_14703	29	0.6	Mlig455_031744	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_031744 {REF} {Length: 568} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45985} {RNA1310_6194.2} {RNA815_4662.1}
13.	MligTC455_37008	140	2.91	Mlig455_064403	Neo: - Age: Down-Up-Down		0.951	-	-	-	-	0.951	-	Mlig455_064403 {REF} {Length: 1208} {Pfam: Neurensin [PF14927.8, score=39.7]; Uncharacterised conserved protein (DUF2371) [PF10177.11, score=21.6]} {RNA1509_45387, RNA1509_51128} {RNA1310_51502.1, RNA1509_45387} {RNA1509_45387, RNA815_17212}
14.	MligTC455_53176	54	1.13	Mlig455_051303	Neo: - Age: - Region-enriched R2: 4.924/0.00950		0.95	-	-	-	-	0.950	-	Mlig455_051303 {REF} {Length: 1642} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=25.6]} {Dmel: FBgn0083971, CG34135, [RH, Score=61.6, Expect=7e-11]} {RNA1310_56013}

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