TomoSeq data search

Data search

Results for MligTC455_53097

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53097

510

10.63

Mlig455_002984, Mlig455_055616

Neo: -

Age: Down-Up-Down

Region-enriched R2: 2.486/0.00600

CHIC2

Mlig455_002984 {REF} {Length: 2704} {Pfam: Golgin subfamily A member 7/ERF4 family [PF10256.11, score=44.8]} {Human: ENSG00000109220, CHIC2, cysteine rich hydrophobic domain 2, [RH, Score=162, Expect=4e-51]; ENSG00000204116, CHIC1, cysteine rich hydrophobic domain 1, [RH, Score=161, Expect=5e-50]} {Mouse: ENSMUSG00000029229, Chic2, cysteine-rich hydrophobic domain 2, [RH, Score=163, Expect=1e-51]; ENSMUSG00000031327, Chic1, cysteine-rich hydrophobic domain 1, [RH, Score=160, Expect=6e-50]} {Dmel: FBgn0046247, CG5938, [RH, Score=161, Expect=4e-51]} {Celegans: WBGene00044319, tag-266, Cysteine-rich hydrophobic protein, [Score=163, Expect=9e-52]} {Smed: dd_Smed_v6_4955_0_1, dd_Smed_v6_4955_0_1, [RH, Score=132, Expect=7e-40]} {RNA1509_11522} {RNA1310_1228.2, RNA1509_11522} {RNA1509_11522, RNA815_2491}

Mlig455_055616 {REF} {Length: 2066} {Pfam: Golgin subfamily A member 7/ERF4 family [PF10256.11, score=44.8]} {Human: ENSG00000109220, CHIC2, cysteine rich hydrophobic domain 2, [RH, Score=162, Expect=4e-51]; ENSG00000204116, CHIC1, cysteine rich hydrophobic domain 1, [RH, Score=161, Expect=5e-50]} {Mouse: ENSMUSG00000029229, Chic2, cysteine-rich hydrophobic domain 2, [RH, Score=163, Expect=1e-51]; ENSMUSG00000031327, Chic1, cysteine-rich hydrophobic domain 1, [RH, Score=160, Expect=6e-50]} {Dmel: FBgn0046247, CG5938, [RH, Score=161, Expect=4e-51]} {Celegans: WBGene00044319, tag-266, Cysteine-rich hydrophobic protein, [Score=163, Expect=9e-52]} {Smed: dd_Smed_v6_4955_0_1, dd_Smed_v6_4955_0_1, [RH, Score=132, Expect=7e-40]} {RNA1509_11522} {RNA1310_1228.2} {RNA815_2491}

Cumulative graph for MligTC455_53097

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.083	3.769	0.15056	0.76570
RegionR2	2.486	3.769	0.00017	0.00600
RegionR3	-0.213	3.769	0.70325	1.00000
RegionR4	-1.38	3.769	0.03060	0.13772
RegionR5	0.372	3.769	0.42930	0.78938
RegionR6	0.215	3.769	0.68499	1.00000
RegionR7	-0.448	3.769	0.50680	1.00000
RegionR8	1.051	3.769	0.11036	0.61712

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.112	3.769	0.49244	1.00000
RegenerationR2	-0.672	3.769	0.21573	0.66296
RegenerationR3	0.8	3.769	0.23976	0.67437
RegenerationR4	-0.034	3.769	0.95982	1.00000
RegenerationR5	-0.102	3.769	0.86985	1.00000
RegenerationR6	0.117	3.769	0.85567	1.00000
RegenerationBL	0.7	3.769	0.32116	0.68805
RegenerationTP	-0.054	3.769	0.94677	1.00000

Genes with expression patterns similar to MligTC455_53097

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53097	510	10.63	Mlig455_002984, Mlig455_055616	Neo: - Age: Down-Up-Down Region-enriched R2: 2.486/0.00600	CHIC2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002984 {REF} {Length: 2704} {Pfam: Golgin subfamily A member 7/ERF4 family [PF10256.11, score=44.8]} {Human: ENSG00000109220, CHIC2, cysteine rich hydrophobic domain 2, [RH, Score=162, Expect=4e-51]; ENSG00000204116, CHIC1, cysteine rich hydrophobic domain 1, [RH, Score=161, Expect=5e-50]} {Mouse: ENSMUSG00000029229, Chic2, cysteine-rich hydrophobic domain 2, [RH, Score=163, Expect=1e-51]; ENSMUSG00000031327, Chic1, cysteine-rich hydrophobic domain 1, [RH, Score=160, Expect=6e-50]} {Dmel: FBgn0046247, CG5938, [RH, Score=161, Expect=4e-51]} {Celegans: WBGene00044319, tag-266, Cysteine-rich hydrophobic protein, [Score=163, Expect=9e-52]} {Smed: dd_Smed_v6_4955_0_1, dd_Smed_v6_4955_0_1, [RH, Score=132, Expect=7e-40]} {RNA1509_11522} {RNA1310_1228.2, RNA1509_11522} {RNA1509_11522, RNA815_2491} Mlig455_055616 {REF} {Length: 2066} {Pfam: Golgin subfamily A member 7/ERF4 family [PF10256.11, score=44.8]} {Human: ENSG00000109220, CHIC2, cysteine rich hydrophobic domain 2, [RH, Score=162, Expect=4e-51]; ENSG00000204116, CHIC1, cysteine rich hydrophobic domain 1, [RH, Score=161, Expect=5e-50]} {Mouse: ENSMUSG00000029229, Chic2, cysteine-rich hydrophobic domain 2, [RH, Score=163, Expect=1e-51]; ENSMUSG00000031327, Chic1, cysteine-rich hydrophobic domain 1, [RH, Score=160, Expect=6e-50]} {Dmel: FBgn0046247, CG5938, [RH, Score=161, Expect=4e-51]} {Celegans: WBGene00044319, tag-266, Cysteine-rich hydrophobic protein, [Score=163, Expect=9e-52]} {Smed: dd_Smed_v6_4955_0_1, dd_Smed_v6_4955_0_1, [RH, Score=132, Expect=7e-40]} {RNA1509_11522} {RNA1310_1228.2} {RNA815_2491}
2.	MligTC455_37168	752	15.67	Mlig455_032391	Neo: - Age: Up-Down-Up Region-enriched R5: 1.708/0.00065 Regeneration-upregulated BL: 2.288 Regeneration-enriched BL: 2.288	CIC	1.677	-	-	-	0.967	-	0.710	Mlig455_032391 {REF} {Length: 2915} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4819) [PF16090.7, score=43.4]} {Human: ENSG00000079432, CIC, capicua transcriptional repressor, [RH, Score=108, Expect=1e-23]} {Mouse: ENSMUSG00000005442, Cic, capicua transcriptional repressor, [RH, Score=105, Expect=1e-22]} {Dmel: FBgn0262582, cic, capicua, [Score=90.5, Expect=3e-18]} {Celegans: WBGene00001560, gei-3, GEX Interacting protein, [RH, Score=103, Expect=2e-22]} {Smed: dd_Smed_v6_4601_0_1, dd_Smed_v6_4601_0_1, [RH, Score=101, Expect=8e-22]} {RNA1509_30705} {RNA1310_5821, RNA1509_30705} {RNA1509_30705, RNA815_6450}
3.	MligTC455_51866	250	5.2	Mlig455_051253	Neo: - Age: -	NEK1	0.965	-	-	-	-	-	0.965	Mlig455_051253 {REF} {Length: 5512} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=228.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=159.9]; Kinase-like [PF14531.8, score=26.2]; ABC1 atypical kinase-like domain [PF03109.18, score=25.4]} {Human: ENSG00000137601, NEK1, NIMA related kinase 1, [RH, Score=380, Expect=3e-111]} {Mouse: ENSMUSG00000031644, Nek1, NIMA (never in mitosis gene a)-related expressed kinase 1, [RH, Score=377, Expect=1e-110]} {Dmel: FBgn0045980, niki, nimA-like kinase, [Score=214, Expect=3e-57]} {Celegans: WBGene00021461, nekl-1, NEK (NEver in mitosis Kinase) Like, [Score=216, Expect=2e-57]} {Smed: dd_Smed_v6_11366_0_1, dd_Smed_v6_11366_0_1, [RH, Score=297, Expect=8e-84]} {RNA1509_23592, RNA1509_27598} {RNA1310_1375.1, RNA1509_23592, RNA1509_27598} {RNA1509_23592, RNA1509_27598, RNA815_18174.1}
4.	MligTC455_43109	491	10.23	Mlig455_029599	Neo: - Age: -	ARRDC2	0.96	-	-	-	-	-	0.960	Mlig455_029599 {REF} {Length: 1947} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=67.4]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=58.1]} {Human: ENSG00000105643, ARRDC2, arrestin domain containing 2, [Score=100, Expect=1e-22]} {Mouse: ENSMUSG00000110906, Arrdc2, arrestin domain containing 2, [Score=97.1, Expect=8e-22]; ENSMUSG00000002910, Arrdc2, arrestin domain containing 2, [Score=97.1, Expect=8e-22]} {Dmel: FBgn0035103, Vdup1, Vitamin D[[3]] up-regulated protein 1, [Score=90.5, Expect=5e-20]} {Celegans: WBGene00011732, arrd-17, Arrestin domain-containing protein 17, [Score=84.3, Expect=1e-17]} {Smed: dd_Smed_v6_8715_0_1, dd_Smed_v6_8715_0_1, [Score=55.8, Expect=2e-08]} {RNA1509_45476} {RNA1310_16251} {RNA815_9075}
5.	MligTC455_46825	27	0.57	Mlig455_009759	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_009759 {REF} {Length: 3805} {TRANSSPLICED} {Pfam: Cytochrome P450 [PF00067.24, score=22.6]} {RNA1509_45084} {RNA1310_18153} {RNA815_2804}
6.	MligTC455_40810	75	1.56	Mlig455_009123, Mlig455_021293	Neo: - Age: Up-Down-Down	NYNRIN	0.955	-	-	-	0.955	-	-	Mlig455_009123 {REF} {Length: 6436} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=110.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=69.5]; Integrase zinc binding domain [PF17921.3, score=53.2]; Integrase core domain [PF00665.28, score=44.5]; H2C2 zinc finger [PF09337.12, score=20.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.6, Expect=5e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=314, Expect=2e-90]} {RNA1509_37150} {RNA1310_27350} {RNA815_53591} Mlig455_021293 {REF} {Length: 3539} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=110.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=90.7]; Integrase zinc binding domain [PF17921.3, score=53.3]; Integrase core domain [PF00665.28, score=44.5]; H2C2 zinc finger [PF09337.12, score=20.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=75.1, Expect=8e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=70.1, Expect=2e-11]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=313, Expect=3e-90]} {RNA1509_24311} {RNA1310_18657.1} {RNA815_49943}
7.	MligTC455_53521	1973	41.1	Mlig455_058693	Neo: - Age: -	CHD4	0.955	-	-	-	0.955	-	-	Mlig455_058693 {REF} {Length: 6234} {TRANSSPLICED} {Pfam: CHDCT2 (NUC038) domain [PF08074.13, score=234.7]; SNF2-related domain [PF00176.25, score=208.9]; Domain of Unknown Function (DUF1086) [PF06461.13, score=157.7]; Helicase conserved C-terminal domain [PF00271.33, score=76.5]; Domain of Unknown Function (DUF1087) [PF06465.15, score=68.2]; PHD-finger [PF00628.31, score=66.0]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=56.4]; CHDNT (NUC034) domain [PF08073.14, score=39.0]; Type III restriction enzyme, res subunit [PF04851.17, score=30.7]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=29.7]; PHD-finger [PF13831.8, score=28.9]; PHD-like zinc-binding domain [PF13771.8, score=23.8]} {Human: ENSG00000111642, CHD4, chromodomain helicase DNA binding protein 4, [RH, Score=1726, Expect=0.0]; ENSG00000170004, CHD3, chromodomain helicase DNA binding protein 3, [RH, Score=1723, Expect=0.0]} {Mouse: ENSMUSG00000005045, Chd5, chromodomain helicase DNA binding protein 5, [RH, Score=1756, Expect=0.0]; ENSMUSG00000018474, Chd3, chromodomain helicase DNA binding protein 3, [RH, Score=1720, Expect=0.0]} {Dmel: FBgn0262519, Mi-2, [Score=1444, Expect=0.0]} {Celegans: WBGene00000482, chd-3, Chromodomain-helicase-DNA-binding protein 3 homolog, [RH, Score=1534, Expect=0.0]} {Smed: dd_Smed_v6_2331_0_1, dd_Smed_v6_2331_0_1, [RH, Score=1702, Expect=0.0]} {RNA1509_2055} {RNA1310_619, RNA1509_2055} {RNA1509_2055, RNA815_1273.1}
8.	MligTC455_35878	750	15.63	Mlig455_034777	Neo: - Age: -	DSCAML1	0.954	-	-	-	0.954	-	-	Mlig455_034777 {REF} {Length: 7967} {Pfam: Immunoglobulin domain [PF13927.8, score=115.3]; Fibronectin type III domain [PF00041.23, score=102.0]; Immunoglobulin I-set domain [PF07679.18, score=67.0]; Immunoglobulin domain [PF13895.8, score=56.3]; Immunoglobulin V-set domain [PF07686.19, score=43.7]; Immunoglobulin domain [PF00047.27, score=35.4]} {Human: ENSG00000177103, DSCAML1, DS cell adhesion molecule like 1, [Score=136, Expect=3e-31]} {Mouse: ENSMUSG00000032087, Dscaml1, DS cell adhesion molecule like 1, [Score=136, Expect=3e-31]} {Dmel: FBgn0263219, Dscam4, Down syndrome cell adhesion molecule 4, [Score=116, Expect=2e-25]} {Celegans: WBGene00004371, rig-4, Protein sidekick homolog, [Score=84.7, Expect=9e-16]} {Smed: dd_Smed_v6_3024_0_1, dd_Smed_v6_3024_0_1, [Score=252, Expect=6e-67]} {RNA1509_14715, RNA1509_17640, RNA1509_44798} {RNA1310_789, RNA1509_14715, RNA1509_17640, RNA1509_44798} {RNA1509_14715, RNA1509_17640, RNA1509_44798, RNA815_11499}
9.	MligTC455_25178	220	4.59	Mlig455_035056, Mlig455_035077	Neo: - Age: - Region-enriched R6: 3.818/0.00081	ADRA2A	0.952	-	-	-	0.952	-	-	Mlig455_035056 {REF} {Length: 2102} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=96.7]} {Human: ENSG00000150594, ADRA2A, adrenoceptor alpha 2A, [Score=57.0, Expect=5e-08]; ENSG00000164128, NPY1R, neuropeptide Y receptor Y1, [Score=55.8, Expect=8e-08]} {Mouse: ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=57.8, Expect=2e-08]; ENSMUSG00000033717, Adra2a, adrenergic receptor, alpha 2a, [Score=56.6, Expect=4e-08]} {Dmel: FBgn0053517, Dop2R, Dopamine 2-like receptor, [Score=72.8, Expect=3e-13]} {Celegans: WBGene00016037, dop-6, DOPamine receptor, [Score=57.8, Expect=1e-08]} {Smed: dd_Smed_v6_23525_0_1, dd_Smed_v6_23525_0_1, [Score=115, Expect=8e-28]} {RNA1310_13657} {RNA815_38573} Mlig455_035077 {REF} {Length: 2088} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=96.1]} {Human: ENSG00000150594, ADRA2A, adrenoceptor alpha 2A, [Score=59.7, Expect=7e-09]} {Mouse: ENSMUSG00000033717, Adra2a, adrenergic receptor, alpha 2a, [Score=59.3, Expect=7e-09]; ENSMUSG00000036437, Npy1r, neuropeptide Y receptor Y1, [Score=57.0, Expect=3e-08]} {Dmel: FBgn0053517, Dop2R, Dopamine 2-like receptor, [Score=76.3, Expect=3e-14]} {Celegans: WBGene00006475, tyra-3, TYRAmine receptor, [Score=57.8, Expect=1e-08]} {Smed: dd_Smed_v6_25618_0_1, dd_Smed_v6_25618_0_1, [Score=116, Expect=6e-28]} {RNA1310_13657} {RNA815_38573}
10.	MligTC455_27815	1267	26.39	Mlig455_003681, Mlig455_007743, Mlig455_008454, Mlig455_014548, Mlig455_019559, Mlig455_023634, Mlig455_026256, Mlig455_029577, Mlig455_043741, Mlig455_070803	Neo: - Age: logFC(26M/2M)=0.722 Regeneration-upregulated BL: 2.777 Regeneration-enriched BL: 2.777		0.951	-	-	-	0.951	-	-	Mlig455_003681 {REF} {Length: 907} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1} Mlig455_007743 {REF} {Length: 185} {NoTransDecoderORF} {RNA1509_8341} {RNA1310_76950} {RNA815_2170.1} Mlig455_008454 {REF} {Length: 175} {NoTransDecoderORF} {RNA1509_8341} {RNA1310_76950} {RNA815_2170.1} Mlig455_014548 {REF} {Length: 352} {RNA1509_8341} {RNA1310_50077} {RNA815_2170.1} Mlig455_019559 {REF} {Length: 1856} {TRANSSPLICED} {RNA1509_8341} {RNA1310_843} {RNA815_2170.1} Mlig455_023634 {REF} {Length: 1932} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_40233} {RNA1310_27331} {RNA815_2170.1} Mlig455_026256 {REF} {Length: 1373} {RNA1509_13206} {RNA1310_1311.1} {RNA815_19414} Mlig455_029577 {REF} {Length: 431} {RNA1509_40233} {RNA1310_27331} {RNA815_2170.2} Mlig455_043741 {REF} {Length: 1856} {TRANSSPLICED} {RNA1509_8341} {RNA1310_843} {RNA815_2170.1} Mlig455_070803 {REF} {Length: 7254} {RNA1509_55315} {RNA1310_14431} {RNA815_2170.1}

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