M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_53387

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53387 188 3.91 Mlig455_025116

Neo: -

Age: -

 Mlig455_025116 {REF} {Length: 2443} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF13410.8, score=21.7]} {RNA1509_15321, RNA1509_30948, RNA1509_38855} {RNA1310_18756.1, RNA1509_15321, RNA1509_30948, RNA1509_38855} {RNA1509_15321, RNA1509_30948, RNA1509_38855, RNA815_4170.1}

Cumulative graph for MligTC455_53387

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.009 2.648 0.99927 1.00000
RegionR2 0.354 2.648 0.67280 1.00000
RegionR3 -0.352 2.648 0.59400 1.00000
RegionR4 0.601 2.648 0.47397 0.80172
RegionR5 -0.158 2.648 0.79404 1.00000
RegionR6 0.03 2.648 0.97037 1.00000
RegionR7 0.292 2.648 0.72381 1.00000
RegionR8 -0.759 2.648 0.49583 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.434 2.648 0.48045 1.00000
RegenerationR2 0.65 2.648 0.26198 0.70869
RegenerationR3 -0.378 2.648 0.60652 0.91113
RegenerationR4 -0.117 2.648 0.87502 1.00000
RegenerationR5 0.155 2.648 0.81839 0.99404
RegenerationR6 -0.122 2.648 0.87405 1.00000
RegenerationBL 0.24 2.648 0.79713 1.00000
RegenerationTP -1.054 2.648 0.35419 0.79566


Genes with expression patterns similar to MligTC455_53387

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53387 188 3.91 Mlig455_025116

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_025116 {REF} {Length: 2443} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF13410.8, score=21.7]} {RNA1509_15321, RNA1509_30948, RNA1509_38855} {RNA1310_18756.1, RNA1509_15321, RNA1509_30948, RNA1509_38855} {RNA1509_15321, RNA1509_30948, RNA1509_38855, RNA815_4170.1}
2. MligTC455_43666 172 3.59 Mlig455_051408

Neo: -

Age: logFC(26M/2M)=-0.352

 KY 2.528 - - 0.961 - 0.837 0.730 Mlig455_051408 {REF} {Length: 5047} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=111, Expect=2e-24]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=111, Expect=1e-24]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=150, Expect=7e-37]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=139, Expect=1e-34]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [Score=137, Expect=1e-32]} {RNA1509_7582} {RNA1310_2203} {RNA815_6135}
3. MligTC455_42126 448 9.33 Mlig455_004673, Mlig455_004736

Neo: -

Age: Down-Up-Down

 FOXJ3 1.906 - - - - 0.978 0.928

Mlig455_004673 {REF} {Length: 2159} {Pfam: Forkhead domain [PF00250.20, score=89.9]} {Human: ENSG00000198815, FOXJ3, forkhead box J3, [Score=103, Expect=5e-24]; ENSG00000065970, FOXJ2, forkhead box J2, [Score=98.2, Expect=1e-21]} {Mouse: ENSMUSG00000032998, Foxj3, forkhead box J3, [Score=103, Expect=2e-23]} {Dmel: FBgn0004567, slp2, sloppy paired 2, [Score=88.6, Expect=6e-19]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=86.7, Expect=5e-20]} {Smed: dd_Smed_v6_19255_0_1, dd_Smed_v6_19255_0_1, [Score=92.4, Expect=3e-21]} {RNA1509_17631} {RNA1310_12479.1} {RNA815_6293}

Mlig455_004736 {REF} {Length: 2158} {Pfam: Forkhead domain [PF00250.20, score=118.7]} {Human: ENSG00000198815, FOXJ3, forkhead box J3, [Score=138, Expect=7e-35]} {Mouse: ENSMUSG00000032998, Foxj3, forkhead box J3, [Score=138, Expect=6e-35]} {Dmel: FBgn0004567, slp2, sloppy paired 2, [Score=110, Expect=7e-26]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=105, Expect=2e-25]} {Smed: dd_Smed_v6_12170_0_1, dd_Smed_v6_12170_0_1, [RH, Score=108, Expect=5e-25]} {RNA1509_17631} {RNA1310_12479.1, RNA1509_17631} {RNA1509_17631, RNA815_6293}
4. MligTC455_27181 505 10.52 Mlig455_033391, Mlig455_033441

Neo: -

Age: logFC(26M/2M)=-0.263

Region-enriched R2: 2.348/0.01526

 TMEM67 1.873 - - - - 0.974 0.899

Mlig455_033391 {REF} {Length: 5538} {Pfam: Meckelin (Transmembrane protein 67) [PF09773.11, score=724.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=117.4]} {Human: ENSG00000164953, TMEM67, transmembrane protein 67, [RH, Score=528, Expect=1e-165]} {Mouse: ENSMUSG00000049488, Tmem67, transmembrane protein 67, [RH, Score=522, Expect=2e-162]} {Dmel: FBgn0038814, CG15923, [RH, Score=151, Expect=1e-36]} {Celegans: WBGene00018042, mks-3, MecKel-Gruber Syndrome (MKS) homolog, [RH, Score=311, Expect=4e-89]} {Smed: dd_Smed_v6_7765_0_1, dd_Smed_v6_7765_0_1, [RH, Score=554, Expect=3e-176]} {RNA1509_3205} {RNA1310_2827.1} {RNA815_833}

Mlig455_033441 {REF} {Length: 3979} {Pfam: Meckelin (Transmembrane protein 67) [PF09773.11, score=724.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=117.4]} {Human: ENSG00000164953, TMEM67, transmembrane protein 67, [RH, Score=528, Expect=1e-165]} {Mouse: ENSMUSG00000049488, Tmem67, transmembrane protein 67, [RH, Score=522, Expect=2e-162]} {Dmel: FBgn0038814, CG15923, [RH, Score=151, Expect=1e-36]} {Celegans: WBGene00018042, mks-3, MecKel-Gruber Syndrome (MKS) homolog, [RH, Score=311, Expect=4e-89]} {Smed: dd_Smed_v6_7765_0_1, dd_Smed_v6_7765_0_1, [RH, Score=554, Expect=3e-176]} {RNA1509_3205} {RNA1310_2827.1} {RNA815_833}
5. MligTC455_42972 48 0.99 Mlig455_016466

Neo: -

Age: Up-Up-Down

 1.852 - - 0.959 - 0.893 - Mlig455_016466 {REF} {Length: 3396} {Pfam: Innexin [PF00876.20, score=339.8]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=104, Expect=9e-25]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=278, Expect=2e-90]} {Smed: dd_Smed_v6_10567_0_1, dd_Smed_v6_10567_0_1, [RH, Score=510, Expect=0.0]} {RNA1509_54229} {RNA1310_29188.1, RNA1509_54229} {RNA1509_54229, RNA815_4655}
6. MligTC455_38148 787 16.4 Mlig455_067155

Neo: -

Age: -

 FAT1 1.821 - - 0.962 - 0.859 - Mlig455_067155 {REF} {Length: 4823} {Pfam: Cadherin domain [PF00028.19, score=183.7]; EGF-like domain [PF00008.29, score=55.8]; Calcium-binding EGF domain [PF07645.17, score=31.4]; Laminin G domain [PF02210.26, score=24.7]} {Human: ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=292, Expect=3e-79]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=299, Expect=2e-81]} {Dmel: FBgn0261574, kug, kugelei, [Score=213, Expect=3e-55]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=189, Expect=9e-48]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=218, Expect=1e-56]} {RNA1509_13557} {RNA1310_1912.1} {RNA815_14235}
7. MligTC455_39418 105 2.19 Mlig455_060584

Neo: -

Age: logFC(26M/2M)=-0.365

 1.819 - - 0.955 - - 0.864 Mlig455_060584 {REF} {Length: 2959} {RNA1509_1853, RNA1509_19407} {RNA1310_3937, RNA1509_1853, RNA1509_19407} {RNA1509_1853, RNA1509_19407, RNA815_2591.1}
8. MligTC455_21593 425 8.84 Mlig455_013101, Mlig455_013193

Neo: -

Age: Down-Down-Up

 1.804 - - 0.967 - 0.837 -

Mlig455_013101 {REF} {Length: 542} {RNA1509_56841} {RNA1310_116243} {RNA815_22112}

Mlig455_013193 {REF} {Length: 528} {RNA1509_56841} {RNA1310_116243} {RNA815_22112}
9. MligTC455_29774 206 4.29 Mlig455_038034

Neo: -

Age: Down-Up-Down

 MAP3K19 1.804 - - 0.827 - 0.977 - Mlig455_038034 {REF} {Length: 3703} {Pfam: Protein kinase domain [PF00069.27, score=183.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=138.8]; Ankyrin repeats (many copies) [PF13637.8, score=101.4]; Ankyrin repeats (3 copies) [PF12796.9, score=82.0]; Ankyrin repeats (many copies) [PF13857.8, score=56.2]; Ankyrin repeat [PF13606.8, score=47.0]; Fungal protein kinase [PF17667.3, score=32.9]; Ankyrin repeat [PF00023.32, score=24.5]; ABC1 atypical kinase-like domain [PF03109.18, score=22.2]; CRISPR-associated protein [PF12469.10, score=21.2]; Protein of unknown function (DUF1027) [PF06265.13, score=19.3]; Kinase-like [PF14531.8, score=19.3]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=150, Expect=2e-38]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=150, Expect=2e-38]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=127, Expect=3e-30]} {Celegans: WBGene00006443, pak-2, Serine/threonine-protein kinase pak-2, [Score=115, Expect=9e-27]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [Score=122, Expect=1e-30]} {RNA1509_45037} {RNA1310_17852.1} {RNA815_5323.2}
10. MligTC455_51696 624 12.99 Mlig455_011356

Neo: -

Age: -

 FAM47E 1.78 - - 0.954 - 0.826 - Mlig455_011356 {REF} {Length: 2028} {Pfam: FAM47 family [PF14642.8, score=51.3]} {Human: ENSG00000189157, FAM47E, family with sequence similarity 47 member E, [RH, Score=138, Expect=9e-36]} {Mouse: ENSMUSG00000078315, Fam47c, family with sequence similarity 47, member C, [RH, Score=119, Expect=6e-29]} {Smed: dd_Smed_v6_10346_0_1, dd_Smed_v6_10346_0_1, [RH, Score=293, Expect=6e-95]} {RNA1509_41096, RNA1509_54260, RNA1509_8031} {RNA1310_12665, RNA1509_41096, RNA1509_54260} {RNA1509_41096, RNA1509_54260, RNA815_4489.1}
11. MligTC455_15595 114 2.37 Mlig455_009340

Neo: -

Age: -

 1.772 - - 0.959 - 0.813 - Mlig455_009340 {REF} {Length: 1538} {TRANSSPLICED} {RNA1310_41965} {RNA815_27810}
12. MligTC455_17959 100 2.07 Mlig455_007716

Neo: -

Age: Down-Up-Down

 1.77 - - - - 0.957 0.813 Mlig455_007716 {REF} {Length: 2235} {Pfam: Plectin repeat [PF00681.22, score=24.7]} {RNA1509_53557} {RNA1310_11354} {RNA815_18566}
13. MligTC455_21984 305 6.35 Mlig455_024350

Neo: -

Age: -

 NT5E 1.765 - - 0.955 - - 0.810 Mlig455_024350 {REF} {Length: 2710} {Pfam: 5'-nucleotidase, C-terminal domain [PF02872.20, score=110.3]; Calcineurin-like phosphoesterase [PF00149.30, score=42.5]} {Human: ENSG00000135318, NT5E, 5'-nucleotidase ecto, [RH, Score=103, Expect=8e-23]} {Mouse: ENSMUSG00000021718, 4933425L06Rik, RIKEN cDNA 4933425L06 gene, [RH, Score=383, Expect=4e-126]} {Dmel: FBgn0033538, CG11883, [RH, Score=461, Expect=2e-154]} {Smed: dd_Smed_v6_3474_0_1, dd_Smed_v6_3474_0_1, [RH, Score=464, Expect=1e-158]} {RNA1509_22709} {RNA1310_12561} {RNA815_22779}
14. MligTC455_32317 1546 32.21 Mlig455_039677

Neo: -

Age: logFC(26M/2M)=-0.274

 BEST4 1.735 - - - - 0.965 0.770 Mlig455_039677 {REF} {Length: 3379} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=182.9]} {Human: ENSG00000142959, BEST4, bestrophin 4, [Score=205, Expect=9e-60]} {Mouse: ENSMUSG00000020169, Best3, bestrophin 3, [Score=193, Expect=8e-54]; ENSMUSG00000052819, Best2, bestrophin 2, [Score=191, Expect=3e-54]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=227, Expect=3e-66]} {Celegans: WBGene00015288, best-4, Bestrophin homolog, [Score=180, Expect=5e-50]} {Smed: dd_Smed_v6_8073_0_1, dd_Smed_v6_8073_0_1, [Score=359, Expect=7e-120]} {RNA1509_15539, RNA1509_25951, RNA1509_8648} {RNA1310_8340, RNA1509_15539, RNA1509_25951, RNA1509_8648} {RNA1509_15539, RNA1509_25951, RNA1509_8648, RNA815_2922.1}
15. MligTC455_43285 112 2.34 Mlig455_006643

Neo: -

Age: -

 ARMC3 1.73 - - 0.779 - 0.951 - Mlig455_006643 {REF} {Length: 3011} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=100.6]; Ethylene-responsive protein kinase Le-CTR1 [PF14381.8, score=95.9]; HEAT repeats [PF13646.8, score=72.3]; HEAT repeat [PF02985.24, score=52.3]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=40.1]; HEAT-like repeat [PF13513.8, score=40.0]; V-ATPase subunit H [PF11698.10, score=39.8]; Armadillo-like [PF04826.15, score=29.7]; Interferon-related developmental regulator (IFRD) [PF05004.15, score=18.7]} {Human: ENSG00000165309, ARMC3, armadillo repeat containing 3, [RH, Score=533, Expect=3e-176]} {Mouse: ENSMUSG00000037683, Armc3, armadillo repeat containing 3, [RH, Score=504, Expect=2e-165]} {Dmel: FBgn0033794, CG13326, [Score=57.4, Expect=6e-08]} {Smed: dd_Smed_v6_9679_0_1, dd_Smed_v6_9679_0_1, [RH, Score=752, Expect=0.0]} {RNA1509_14962, RNA1509_42538, RNA1509_58062} {RNA1310_4998.1, RNA1509_14962, RNA1509_42538} {RNA1509_14962, RNA1509_42538, RNA815_8459}
16. MligTC455_33469 85 1.76 Mlig455_013902

Neo: -

Age: -

 1.691 - - 0.972 - 0.719 - Mlig455_013902 {REF} {Length: 260} {NoTransDecoderORF} {RNA1509_42818} {RNA1310_58695} {RNA815_11113.1}
17. MligTC455_43058 2231 46.48 Mlig455_031168

Neo: -

Age: -

 ATP1B1 1.68 - - 0.718 - 0.962 - Mlig455_031168 {REF} {Length: 1932} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=185.5]} {Human: ENSG00000143153, ATP1B1, ATPase Na+/K+ transporting subunit beta 1, [Score=112, Expect=2e-27]} {Mouse: ENSMUSG00000026576, Atp1b1, ATPase, Na+/K+ transporting, beta 1 polypeptide, [Score=114, Expect=4e-28]} {Dmel: FBgn0032946, nrv3, nervana 3, [Score=139, Expect=2e-37]} {Celegans: WBGene00008074, nkb-2, Na+/K+ ATPase, Beta subunit, [RH, Score=77.0, Expect=3e-15]} {Smed: dd_Smed_v6_54970_0_1, dd_Smed_v6_54970_0_1, [RH, Score=197, Expect=5e-60]} {RNA1509_12024, RNA1509_3555} {RNA1310_7815.1, RNA1509_12024, RNA1509_3555} {RNA1509_12024, RNA1509_3555, RNA815_6503}
18. MligTC455_19812 192 3.99 Mlig455_017616

Neo: -

Age: -

 0.971 - - 0.971 - - - Mlig455_017616 {REF} {Length: 579} {TRANSSPLICED} {RNA1509_45712} {RNA1310_38057.2} {RNA815_23034.1}
19. MligTC455_42291 32 0.67 Mlig455_048550

Neo: -

Age: -

 0.968 - - - - - 0.968 Mlig455_048550 {REF} {Length: 2571} {NoTransDecoderORF} {RNA1509_47422} {RNA1310_16235.1} {RNA815_16690}
20. MligTC455_31884 21 0.45 Mlig455_070720

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_070720 {REF} {Length: 2925} {Pfam: WSC domain [PF01822.21, score=55.9]} {RNA1509_22651} {RNA1310_622.1} {RNA815_2514.1}
21. MligTC455_44986 2417 50.36 Mlig455_002882

Neo: -

Age: logFC(26M/2M)=-0.453

 0.967 - - 0.967 - - - Mlig455_002882 {REF} {Length: 1187} {RNA1509_10653, RNA1509_6260} {RNA1310_22176, RNA1509_10653, RNA1509_6260} {RNA1509_10653, RNA1509_6260, RNA815_9068}
22. MligTC455_29761 117 2.44 Mlig455_013621

Neo: -

Age: -

Region-enriched R4: 3.464/0.00365

 BEST1 0.963 - - - - - 0.963 Mlig455_013621 {REF} {Length: 8372} {TRANSSPLICED} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=182.0]} {Human: ENSG00000167995, BEST1, bestrophin 1, [Score=124, Expect=1e-29]; ENSG00000142959, BEST4, bestrophin 4, [Score=124, Expect=5e-30]; ENSG00000127325, BEST3, bestrophin 3, [Score=118, Expect=1e-27]} {Mouse: ENSMUSG00000037418, Best1, bestrophin 1, [Score=143, Expect=1e-36]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=228, Expect=3e-66]} {Celegans: WBGene00015288, best-4, Bestrophin homolog, [Score=173, Expect=2e-47]} {Smed: dd_Smed_v6_8073_0_1, dd_Smed_v6_8073_0_1, [Score=355, Expect=8e-118]} {RNA1509_54677} {RNA1310_17634} {RNA815_11997}
23. MligTC455_48996 148 3.09 Mlig455_000709, Mlig455_000763, Mlig455_033466

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.589

 ANK2, CHRNB3 0.963 - - 0.963 - - -

Mlig455_000709 {REF} {Length: 4279} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=216.3]; Ankyrin repeats (many copies) [PF13637.8, score=213.5]; Ankyrin repeats (many copies) [PF13857.8, score=161.7]; Ankyrin repeat [PF00023.32, score=156.2]; Ankyrin repeat [PF13606.8, score=143.5]; Mab-21 protein [PF03281.16, score=29.5]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=200, Expect=2e-51]; ENSG00000151150, ANK3, ankyrin 3, [Score=194, Expect=2e-49]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=196, Expect=5e-50]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=193, Expect=2e-49]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=202, Expect=3e-52]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=204, Expect=3e-53]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=182, Expect=3e-46]} {RNA1509_42834} {RNA1310_5424.1, RNA1509_42834} {RNA1509_42834, RNA815_8238}

Mlig455_000763 {REF} {Length: 4250} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=255.0]; Ankyrin repeats (many copies) [PF13637.8, score=219.3]; Ankyrin repeat [PF00023.32, score=163.4]; Ankyrin repeat [PF13606.8, score=156.1]; Ankyrin repeats (many copies) [PF13857.8, score=150.4]; Mab-21 protein [PF03281.16, score=31.6]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=207, Expect=1e-53]; ENSG00000151150, ANK3, ankyrin 3, [Score=200, Expect=3e-51]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=202, Expect=6e-52]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=196, Expect=4e-50]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=209, Expect=2e-54]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=210, Expect=7e-55]} {Smed: dd_Smed_v6_6898_0_1, dd_Smed_v6_6898_0_1, [Score=180, Expect=1e-46]} {RNA1509_42834} {RNA1310_5424.1} {RNA815_8238}

Mlig455_033466 {REF} {Length: 1168} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=104.2]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=32.8]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=114, Expect=1e-27]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=108, Expect=2e-25]; ENSMUSG00000035594, Chrna5, cholinergic receptor, nicotinic, alpha polypeptide 5, [Score=106, Expect=6e-25]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=94.0, Expect=1e-20]} {Celegans: WBGene00000951, deg-3, Acetylcholine receptor subunit alpha-type deg-3, [Score=96.7, Expect=2e-21]} {Smed: dd_Smed_v6_62726_0_1, dd_Smed_v6_62726_0_1, [Score=156, Expect=7e-44]} {RNA1310_44183.2} {RNA815_32188}
24. MligTC455_11564 84 1.75 Mlig455_023389, Mlig455_046964

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.294

 TSTA3 0.962 - - 0.962 - - -

Mlig455_023389 {REF} {Length: 1297} {Human: ENSG00000104522, TSTA3, tissue specific transplantation antigen P35B, [Score=141, Expect=2e-41]; ENSG00000278243, TSTA3, tissue specific transplantation antigen P35B, [Score=141, Expect=2e-41]} {Mouse: ENSMUSG00000022570, Tsta3, tissue specific transplantation antigen P35B, [Score=141, Expect=2e-41]} {Dmel: FBgn0267823, Gmer, GDP-4-keto-6-deoxy-D-mannose 3,5-epimerase/4-reductase, [Score=117, Expect=3e-32]} {Celegans: WBGene00019813, ger-1, GDP-L-fucose synthase, [Score=132, Expect=2e-38]} {Smed: dd_Smed_v6_5072_0_1, dd_Smed_v6_5072_0_1, [Score=142, Expect=2e-42]} {RNA1509_16631} {RNA1310_60547} {RNA815_14098}

Mlig455_046964 {REF} {Length: 1824} {TRANSSPLICED} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=176.5]; GDP-mannose 4,6 dehydratase [PF16363.7, score=47.1]; RmlD substrate binding domain [PF04321.19, score=29.5]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=25.2]} {Human: ENSG00000278243, TSTA3, tissue specific transplantation antigen P35B, [RH, Score=449, Expect=2e-159]; ENSG00000104522, TSTA3, tissue specific transplantation antigen P35B, [RH, Score=449, Expect=2e-159]} {Mouse: ENSMUSG00000022570, Tsta3, tissue specific transplantation antigen P35B, [RH, Score=448, Expect=4e-159]} {Dmel: FBgn0267823, Gmer, GDP-4-keto-6-deoxy-D-mannose 3,5-epimerase/4-reductase, [RH, Score=383, Expect=9e-134]} {Celegans: WBGene00019813, ger-1, GDP-L-fucose synthase, [RH, Score=431, Expect=8e-153]} {Smed: dd_Smed_v6_5072_0_1, dd_Smed_v6_5072_0_1, [RH, Score=426, Expect=7e-151]} {RNA1509_16631} {RNA1310_30944} {RNA815_14098}
25. MligTC455_23209 217 4.51 Mlig455_009486

Neo: -

Age: logFC(26M/2M)=-0.272

 0.962 - - 0.962 - - - Mlig455_009486 {REF} {Length: 4260} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=57.0]; Endomucin [PF07010.14, score=19.3]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=46.2, Expect=1e-05]} {RNA1509_12774} {RNA1310_9477.1} {RNA815_3474.1}
26. MligTC455_52337 291 6.07 Mlig455_008793

Neo: -

Age: -

 C2orf76 0.961 - - 0.961 - - - Mlig455_008793 {REF} {Length: 2094} {TRANSSPLICED} {Pfam: Uncharacterized conserved protein (DUF2340) [PF10209.11, score=127.1]} {Human: ENSG00000186132, C2orf76, chromosome 2 open reading frame 76, [RH, Score=97.1, Expect=3e-26]} {Mouse: ENSMUSG00000026388, 3110009E18Rik, RIKEN cDNA 3110009E18 gene, [RH, Score=92.0, Expect=2e-24]} {RNA1509_25259} {RNA1310_9901.1} {RNA815_28452}
27. MligTC455_16227 57 1.2 Mlig455_059119

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=1.809

 0.96 - - - - 0.960 - Mlig455_059119 {REF} {Length: 2862} {Smed: dd_Smed_v6_16150_0_1, dd_Smed_v6_16150_0_1, [RH, Score=95.9, Expect=5e-21]} {RNA1509_34395} {RNA1310_13154} {RNA815_10500}
28. MligTC455_30954 175 3.64 Mlig455_014321

Neo: -

Age: -

 PIK3R1 0.959 - - - - - 0.959 Mlig455_014321 {REF} {Length: 6805} {TRANSSPLICED} {Pfam: SH2 domain [PF00017.26, score=72.2]; RhoGAP domain [PF00620.29, score=57.8]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=39.4]; KIAA1045 RING finger [PF16744.7, score=22.3]} {Human: ENSG00000145675, PIK3R1, phosphoinositide-3-kinase regulatory subunit 1, [RH, Score=150, Expect=1e-36]} {Mouse: ENSMUSG00000028698, Pik3r3, phosphoinositide-3-kinase regulatory subunit 3, [RH, Score=140, Expect=9e-35]; ENSMUSG00000111410, Gm49337, predicted gene, 49337, [RH, Score=140, Expect=2e-34]; ENSMUSG00000041417, Pik3r1, phosphoinositide-3-kinase regulatory subunit 1, [RH, Score=136, Expect=2e-32]; ENSMUSG00000111826, Pik3r2, phosphoinositide-3-kinase regulatory subunit 2, [RH, Score=133, Expect=2e-31]; ENSMUSG00000031834, Pik3r2, phosphoinositide-3-kinase regulatory subunit 2, [RH, Score=133, Expect=2e-31]} {Dmel: FBgn0020622, Pi3K21B, [RH, Score=98.6, Expect=5e-21]} {Celegans: WBGene00000001, aap-1, Phosphoinositide 3-kinase adapter subunit; Phosphoinositide kinase AdAPter subunit, [RH, Score=85.5, Expect=6e-17]} {Smed: dd_Smed_v6_4794_0_2, dd_Smed_v6_4794_0_2, [RH, Score=191, Expect=1e-49]} {RNA1509_10178} {RNA1310_3553} {RNA815_1465}
29. MligTC455_44070 1172 24.41 Mlig455_013674, Mlig455_013682, Mlig455_013691

Neo: -

Age: logFC(26M/2M)=-0.325

 CASKIN1 0.957 - - 0.957 - - -

Mlig455_013674 {REF} {Length: 3260} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=71.4]; SAM domain (Sterile alpha motif) [PF07647.19, score=60.8]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=111, Expect=1e-24]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=109, Expect=6e-24]} {Dmel: FBgn0033987, ckn, caskin, [RH, Score=103, Expect=3e-22]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=90.5, Expect=1e-18]} {Smed: dd_Smed_v6_17759_0_1, dd_Smed_v6_17759_0_1, [Score=142, Expect=4e-35]} {RNA1509_15754} {RNA1310_14106} {RNA815_1106}

Mlig455_013682 {REF} {Length: 4028} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=70.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=59.9]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=111, Expect=4e-24]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=108, Expect=2e-23]} {Dmel: FBgn0033987, ckn, caskin, [RH, Score=102, Expect=6e-22]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=89.7, Expect=3e-18]} {Smed: dd_Smed_v6_17759_0_1, dd_Smed_v6_17759_0_1, [Score=153, Expect=3e-38]} {RNA1509_15754} {RNA1310_14106} {RNA815_1106}

Mlig455_013691 {REF} {Length: 4523} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=70.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=59.9]} {Human: ENSG00000167971, CASKIN1, CASK interacting protein 1, [Score=112, Expect=2e-24]} {Mouse: ENSMUSG00000033597, Caskin1, CASK interacting protein 1, [Score=109, Expect=9e-24]} {Dmel: FBgn0033987, ckn, caskin, [RH, Score=102, Expect=8e-22]} {Celegans: WBGene00016725, C46H3.2, [RH, Score=90.1, Expect=2e-18]} {Smed: dd_Smed_v6_17759_0_1, dd_Smed_v6_17759_0_1, [Score=146, Expect=6e-36]} {RNA1509_15754, RNA1509_52244} {RNA1310_14106, RNA1509_52244} {RNA1509_52244, RNA815_1106}
30. MligTC455_25262 836 17.41 Mlig455_031648, Mlig455_031672

Neo: -

Age: -

 0.955 - - 0.955 - - -

Mlig455_031648 {REF} {Length: 4571} {RNA1509_46004} {RNA1310_24212, RNA1509_46004} {RNA1509_46004, RNA815_12834}

Mlig455_031672 {REF} {Length: 1478} {RNA1509_46004} {RNA1310_24212} {RNA815_12834}
31. MligTC455_19289 169 3.53 Mlig455_048177

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.345

 KANK1 0.954 - - 0.954 - - - Mlig455_048177 {REF} {Length: 6466} {TRANSSPLICED} {Pfam: Ankyrin repeats (many copies) [PF13857.8, score=79.3]; Ankyrin repeats (3 copies) [PF12796.9, score=78.9]; Ankyrin repeats (many copies) [PF13637.8, score=66.6]; Ankyrin repeat [PF13606.8, score=56.8]; Ankyrin repeat [PF00023.32, score=52.2]} {Human: ENSG00000107104, KANK1, KN motif and ankyrin repeat domains 1, [RH, Score=209, Expect=2e-54]; ENSG00000197256, KANK2, KN motif and ankyrin repeat domains 2, [RH, Score=201, Expect=9e-53]} {Mouse: ENSMUSG00000032702, Kank1, KN motif and ankyrin repeat domains 1, [RH, Score=212, Expect=2e-55]} {Dmel: FBgn0027596, Kank, [RH, Score=197, Expect=4e-51]} {Celegans: WBGene00006882, vab-19, VAB-19, [RH, Score=171, Expect=3e-43]} {Smed: dd_Smed_v6_11252_0_1, dd_Smed_v6_11252_0_1, [RH, Score=225, Expect=8e-65]} {RNA1509_6668} {RNA1310_958.1} {RNA815_17395}
32. MligTC455_34893 231 4.8 Mlig455_066819

Neo: -

Age: Down-Up-Down

 CYP2U1 0.954 - - 0.954 - - - Mlig455_066819 {REF} {Length: 1584} {Pfam: Cytochrome P450 [PF00067.24, score=109.5]} {Human: ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=95.5, Expect=9e-24]; ENSG00000186104, CYP2R1, cytochrome P450 family 2 subfamily R member 1, [Score=92.4, Expect=3e-22]; ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=91.3, Expect=9e-22]} {Mouse: ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=91.3, Expect=6e-22]; ENSMUSG00000116063, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=90.5, Expect=1e-21]; ENSMUSG00000027983, Cyp2u1, cytochrome P450, family 2, subfamily u, polypeptide 1, [Score=90.5, Expect=1e-21]; ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=90.1, Expect=1e-21]; ENSMUSG00000030670, Cyp2r1, cytochrome P450, family 2, subfamily r, polypeptide 1, [Score=89.7, Expect=4e-22]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [Score=89.0, Expect=3e-21]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=87.8, Expect=1e-20]; ENSMUSG00000028571, Cyp2j13, cytochrome P450, family 2, subfamily j, polypeptide 13, [Score=87.4, Expect=1e-20]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=76.3, Expect=9e-17]} {Celegans: WBGene00016768, cyp-33E1, CYtochrome P450 family, [Score=89.0, Expect=2e-21]} {Smed: dd_Smed_v6_5344_0_2, dd_Smed_v6_5344_0_2, [Score=102, Expect=4e-26]} {RNA1509_39728} {RNA1310_10949.2} {RNA815_7611}
33. MligTC455_37342 203 4.23 Mlig455_024018

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_024018 {REF} {Length: 1374} {RNA1509_59718} {RNA1310_33285} {RNA815_22262}
34. MligTC455_20241 106 2.21 Mlig455_064205

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.589

 0.953 - - 0.953 - - - Mlig455_064205 {REF} {Length: 1849} {Smed: dd_Smed_v6_12148_0_2, dd_Smed_v6_12148_0_2, [Score=62.8, Expect=2e-11]} {RNA1509_7841} {RNA1310_18810} {RNA815_3607}
35. MligTC455_49078 190 3.96 Mlig455_047213

Neo: -

Age: Down-Up-Down

 EIF5A 0.953 - - - - - 0.953 Mlig455_047213 {REF} {Length: 1506} {Pfam: Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold [PF01287.22, score=19.5]} {Human: ENSG00000132507, EIF5A, eukaryotic translation initiation factor 5A, [Score=100, Expect=8e-27]; ENSG00000253626, EIF5AL1, eukaryotic translation initiation factor 5A-like 1, [Score=99.0, Expect=4e-26]} {Mouse: ENSMUSG00000078812, Eif5a, eukaryotic translation initiation factor 5A, [Score=100, Expect=6e-27]} {Dmel: FBgn0285952, eEF5, eukaryotic translation elongation factor 5, [Score=89.0, Expect=1e-22]} {Celegans: WBGene00002065, iff-2, Eukaryotic translation initiation factor 5A-2, [Score=88.2, Expect=2e-22]} {Smed: dd_Smed_v6_966_0_1, dd_Smed_v6_966_0_1, [Score=79.0, Expect=5e-19]} {RNA1310_34057.1} {RNA815_20082}
36. MligTC455_10931 58 1.21 Mlig455_010937

Neo: -

Age: -

Region-enriched R8: 5.091/0.01315

 0.952 - - - - 0.952 - Mlig455_010937 {REF} {Length: 2035} {Pfam: Galactose binding lectin domain [PF02140.20, score=44.7]} {RNA1310_25216} {RNA815_30839}
37. MligTC455_13907 939 19.56 Mlig455_035407, Mlig455_036552, Mlig455_057796

Neo: -

Age: -

Region-enriched R4: 1.948/0.02686

 0.952 - - - - 0.952 -

Mlig455_035407 {REF} {Length: 3490} {Pfam: Kyakuja-Dileera-Zisupton transposase [PF18758.3, score=62.5]; B-box zinc finger [PF00643.26, score=24.3]; PAN domain [PF00024.28, score=18.9]} {RNA1509_36398} {RNA1310_10411} {RNA815_2960}

Mlig455_036552 {REF} {Length: 2450} {TRANSSPLICED} {RNA1509_36398} {RNA1310_10411} {RNA815_2960}

Mlig455_057796 {REF} {Length: 2089} {TRANSSPLICED} {RNA1509_36398} {RNA1310_10411} {RNA815_2960}
38. MligTC455_33387 27 0.57 Mlig455_023913, Mlig455_046500, Mlig455_057016

Neo: Int S/G2/M

Age: Up-Down-Up, logFC(26M/2M)=0.607

 0.952 - - - - 0.952 -

Mlig455_023913 {REF} {Length: 4194} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=48.4]} {Smed: dd_Smed_v6_11577_0_1, dd_Smed_v6_11577_0_1, [Score=73.2, Expect=8e-14]} {RNA1310_77478} {RNA815_28021}

Mlig455_046500 {REF} {Length: 1944} {RNA1310_77478} {RNA815_28021}

Mlig455_057016 {REF} {Length: 2231} {RNA1310_25610.1}
39. MligTC455_40993 817 17.03 Mlig455_037436, Mlig455_037459

Neo: -

Age: Down-Up-Up

Region-specific R2: 3.184

Region-enriched R2: 1.942/0.00090

 GNG3, GNG7 0.952 - - - - 0.952 -

Mlig455_037436 {REF} {Length: 861} {Pfam: GGL domain [PF00631.24, score=53.3]} {Human: ENSG00000176533, GNG7, G protein subunit gamma 7, [Score=48.5, Expect=2e-08]; ENSG00000172380, GNG12, G protein subunit gamma 12, [Score=47.0, Expect=1e-07]} {Mouse: ENSMUSG00000071658, Gng3, guanine nucleotide binding protein (G protein), gamma 3, [RH, Score=45.8, Expect=2e-07]} {Dmel: FBgn0263029, CG43324, [RH, Score=61.6, Expect=7e-14]} {Celegans: WBGene00001681, gpc-1, Guanine nucleotide-binding protein subunit gamma, [RH, Score=55.1, Expect=2e-11]} {Smed: dd_Smed_v6_1237_0_1, dd_Smed_v6_1237_0_1, [RH, Score=109, Expect=5e-33]} {RNA1509_46825} {RNA1310_42481} {RNA815_22956}

Mlig455_037459 {REF} {Length: 817} {Pfam: GGL domain [PF00631.24, score=53.6]} {Human: ENSG00000162188, GNG3, G protein subunit gamma 3, [RH, Score=46.2, Expect=1e-07]} {Mouse: ENSMUSG00000071658, Gng3, guanine nucleotide binding protein (G protein), gamma 3, [RH, Score=46.2, Expect=9e-08]} {Dmel: FBgn0263029, CG43324, [RH, Score=60.8, Expect=1e-13]} {Celegans: WBGene00001681, gpc-1, Guanine nucleotide-binding protein subunit gamma, [RH, Score=55.1, Expect=1e-11]} {Smed: dd_Smed_v6_1237_0_1, dd_Smed_v6_1237_0_1, [RH, Score=107, Expect=3e-32]} {RNA1509_46825} {RNA1310_42481} {RNA815_22956}
40. MligTC455_26029 895 18.65 Mlig455_047971

Neo: -

Age: -

Region-enriched R4: 1.920/0.01824
Region-enriched R5: 1.601/0.02967

 COQ9 0.951 - - - - - 0.951 Mlig455_047971 {REF} {Length: 939} {TRANSSPLICED} {Pfam: COQ9 [PF08511.13, score=91.8]} {Human: ENSG00000088682, COQ9, coenzyme Q9, [RH, Score=122, Expect=1e-32]} {Mouse: ENSMUSG00000031782, Coq9, coenzyme Q9, [RH, Score=119, Expect=5e-32]} {Dmel: FBgn0050493, CG30493, [RH, Score=132, Expect=6e-37]} {Smed: dd_Smed_v6_4927_0_1, dd_Smed_v6_4927_0_1, [RH, Score=117, Expect=8e-32]} {RNA1509_11041} {RNA1310_32994} {RNA815_19703}
41. MligTC455_35333 90 1.87 Mlig455_067763

Neo: -

Age: -

 RPS6KB1 0.951 - - 0.951 - - - Mlig455_067763 {REF} {Length: 2200} {Pfam: Protein kinase domain [PF00069.27, score=227.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=114.1]; Protein kinase C terminal domain [PF00433.26, score=39.1]; Kinase-like [PF14531.8, score=30.7]} {Human: ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [Score=453, Expect=2e-155]; ENSG00000175634, RPS6KB2, ribosomal protein S6 kinase B2, [Score=441, Expect=2e-150]} {Mouse: ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [Score=452, Expect=2e-154]; ENSMUSG00000097721, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [Score=431, Expect=1e-146]; ENSMUSG00000024830, Rps6kb2, ribosomal protein S6 kinase, polypeptide 2, [Score=431, Expect=1e-146]} {Dmel: FBgn0283472, S6k, Ribosomal protein S6 kinase, [Score=437, Expect=5e-149]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [Score=427, Expect=2e-144]} {Smed: dd_Smed_v6_5658_0_1, dd_Smed_v6_5658_0_1, [RH, Score=466, Expect=2e-160]} {RNA1509_36368} {RNA1310_14771.1} {RNA815_3550}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA