Data search
Results for MligTC455_53393
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53393 | 19628 | 408.92 | Mlig455_019898 | Neo: - Age: Up-Down-Down Regeneration-depleted R3: -3.803 |
AC099489.1 | Mlig455_019898 {REF} {Length: 11591} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=204.2]; Domain of unknown function (DUF1943) [PF09172.13, score=109.0]; von Willebrand factor type D domain [PF00094.27, score=28.1]} {Human: ENSG00000188897, AC099489.1, vitellogenin, [Score=169, Expect=7e-41]} {Mouse: ENSMUSG00000020609, Apob, apolipoprotein B, [Score=94.0, Expect=4e-18]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=152, Expect=7e-36]} {Smed: dd_Smed_v6_636_0_1, dd_Smed_v6_636_0_1, [Score=179, Expect=2e-44]} {RNA1509_69} {RNA1310_66} {RNA815_31.1} |
Cumulative graph for MligTC455_53393
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.609 | 8.788 | 0.09243 | 0.65207 | |
| RegionR2 | -1.016 | 8.788 | 0.18059 | 0.53107 | |
| RegionR3 | 0.184 | 8.788 | 0.78164 | 1.00000 | |
| RegionR4 | -1.707 | 8.788 | 0.03867 | 0.16184 | |
| RegionR5 | 0.218 | 8.788 | 0.75293 | 1.00000 | |
| RegionR6 | 0.92 | 8.788 | 0.15902 | 0.71091 | |
| RegionR7 | -0.727 | 8.788 | 0.28639 | 0.92022 | |
| RegionR8 | 0.518 | 8.788 | 0.44508 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.615 | 8.788 | 0.04379 | 0.67773 | |
| RegenerationR2 | -3.353 | 8.788 | 0.00046 | 0.02942 | |
| RegenerationR3 | -3.803 | 8.788 | 0.00007 | 0.00923 | |
| RegenerationR4 | -3.078 | 8.788 | 0.00107 | 0.03672 | |
| RegenerationR5 | -2.608 | 8.788 | 0.00424 | 0.11718 | |
| RegenerationR6 | -3.538 | 8.788 | 0.00024 | 0.01487 | |
| RegenerationBL | -3.322 | 8.788 | 0.00030 | 0.00981 | |
| RegenerationTP | -2.318 | 8.788 | 0.01292 | 0.19356 |
Genes with expression patterns similar to MligTC455_53393
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53393 | 19628 | 408.92 | Mlig455_019898 | Neo: - Age: Up-Down-Down Regeneration-depleted R3: -3.803 |
AC099489.1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019898 {REF} {Length: 11591} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=204.2]; Domain of unknown function (DUF1943) [PF09172.13, score=109.0]; von Willebrand factor type D domain [PF00094.27, score=28.1]} {Human: ENSG00000188897, AC099489.1, vitellogenin, [Score=169, Expect=7e-41]} {Mouse: ENSMUSG00000020609, Apob, apolipoprotein B, [Score=94.0, Expect=4e-18]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=152, Expect=7e-36]} {Smed: dd_Smed_v6_636_0_1, dd_Smed_v6_636_0_1, [Score=179, Expect=2e-44]} {RNA1509_69} {RNA1310_66} {RNA815_31.1} |
| 2. | MligTC455_53392 | 19385 | 403.85 | Mlig455_011756 | Neo: - Age: Up-Down-Down |
AC099489.1 | 5.969 | 0.999 | 0.999 | 0.997 | 0.994 | 1.000 | 0.980 | Mlig455_011756 {REF} {Length: 12638} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=206.4]; Domain of unknown function (DUF1943) [PF09172.13, score=113.7]; von Willebrand factor type D domain [PF00094.27, score=46.2]; C8 domain [PF08742.13, score=20.4]} {Human: ENSG00000188897, AC099489.1, vitellogenin, [Score=172, Expect=1e-41]} {Mouse: ENSMUSG00000020609, Apob, apolipoprotein B, [Score=95.1, Expect=2e-18]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=156, Expect=3e-37]} {Smed: dd_Smed_v6_636_0_1, dd_Smed_v6_636_0_1, [Score=176, Expect=2e-43]} {RNA1509_1881, RNA1509_22, RNA1509_49208} {RNA1310_66, RNA1509_1881, RNA1509_49208} {RNA1509_1881, RNA1509_49208, RNA815_31.1} |
| 3. | MligTC455_53394 | 4109 | 85.59 | Mlig455_047970 | Neo: - Age: Up-Down-Down Regeneration-downregulated R3: -3.745 Regeneration-depleted R3: -3.745 |
AC099489.1 | 5.198 | 0.833 | 0.778 | 0.972 | 0.874 | 0.771 | 0.970 | Mlig455_047970 {REF} {Length: 12677} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=204.5]; Domain of unknown function (DUF1943) [PF09172.13, score=111.1]; von Willebrand factor type D domain [PF00094.27, score=43.6]} {Human: ENSG00000188897, AC099489.1, vitellogenin, [Score=171, Expect=3e-41]} {Mouse: ENSMUSG00000020609, Apob, apolipoprotein B, [Score=94.0, Expect=5e-18]} {Dmel: FBgn0032136, Apoltp, Apolipoprotein lipid transfer particle, [Score=154, Expect=2e-36]} {Smed: dd_Smed_v6_636_0_1, dd_Smed_v6_636_0_1, [Score=178, Expect=4e-44]} {RNA1509_22} {RNA1310_66} {RNA815_31.1} |
| 4. | MligTC455_36410 | 28008 | 583.49 | Mlig455_058429 | Neo: - |
4.325 | 0.872 | 0.858 | 0.950 | - | 0.797 | 0.848 | Mlig455_058429 {REF} {Length: 6925} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=112.4]; von Willebrand factor type D domain [PF00094.27, score=54.4]; Domain of unknown function (DUF1943) [PF09172.13, score=50.4]} {Dmel: FBgn0087002, apolpp, apolipophorin, [Score=70.9, Expect=2e-11]} {Celegans: WBGene00006929, vit-5, Vitellogenin-5, [RH, Score=64.7, Expect=8e-10]} {Smed: dd_Smed_v6_194_0_1, dd_Smed_v6_194_0_1, [Score=69.3, Expect=2e-11]} {RNA1509_10961, RNA1509_11, RNA1509_1209, RNA1509_1328, RNA1509_1351, RNA1509_40561, RNA1509_486, RNA1509_55304, RNA1509_56322, RNA1509_8659} {RNA1310_273.1, RNA1509_10961, RNA1509_11, RNA1509_1209, RNA1509_1328, RNA1509_1351, RNA1509_40561, RNA1509_486, RNA1509_55304, RNA1509_56322, RNA1509_8659} {RNA1509_10961, RNA1509_11, RNA1509_1209, RNA1509_1328, RNA1509_1351, RNA1509_40561, RNA1509_486, RNA1509_55304, RNA1509_56322, RNA1509_8659, RNA815_92.1} | |
| 5. | MligTC455_36407 | 33888 | 706 | Mlig455_022240 | Neo: - Age: Up-Down-Down |
1.765 | - | - | 0.801 | - | 0.964 | - | Mlig455_022240 {REF} {Length: 7056} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=127.4]; von Willebrand factor type D domain [PF00094.27, score=53.4]; Domain of unknown function (DUF1943) [PF09172.13, score=51.2]} {Celegans: WBGene00006930, vit-6, Vitellogenin-6, [Score=70.9, Expect=1e-11]} {RNA1509_20342, RNA1509_27203, RNA1509_351, RNA1509_6, RNA1509_7840} {RNA1310_450.1, RNA1509_20342, RNA1509_27203, RNA1509_351, RNA1509_7840} {RNA1509_20342, RNA1509_27203, RNA1509_351, RNA1509_7840, RNA815_123.1} | |
| 6. | MligTC455_36408 | 33981 | 707.94 | Mlig455_022255 | Neo: - Age: Up-Down-Down |
1.761 | - | - | 0.803 | - | 0.958 | - | Mlig455_022255 {REF} {Length: 6854} {Pfam: Lipoprotein amino terminal region [PF01347.24, score=124.9]; von Willebrand factor type D domain [PF00094.27, score=53.5]; Domain of unknown function (DUF1943) [PF09172.13, score=51.2]} {Celegans: WBGene00006930, vit-6, Vitellogenin-6, [RH, Score=76.3, Expect=2e-13]} {RNA1509_1285} {RNA1310_4285.1} {RNA815_123.1} | |
| 7. | MligTC455_34558 | 5822 | 121.3 | Mlig455_058216 | Neo: Germline Age: Down-Up-Down, logFC(26M/2M)=1.759 Region-enriched R5: 3.849/0.00000 Regeneration-downregulated R6: -4.179 Regeneration-depleted R6: -4.179 |
1.74 | - | - | 0.783 | - | - | 0.957 | Mlig455_058216 {REF} {Length: 739} {RNA1509_7156} {RNA1310_54087} {RNA815_12035.2} | |
| 8. | MligTC455_34557 | 5999 | 124.97 | Mlig455_058169 | Neo: Germline Age: - Region-specific R5: 4.642 Region-enriched R5: 3.864/0.00000 Regeneration-downregulated R6: -3.970 Regeneration-depleted R6: -3.970 |
1.732 | - | - | 0.778 | - | - | 0.954 | Mlig455_058169 {REF} {Length: 717} {Pfam: Keratin type II head [PF16208.7, score=20.3]} {RNA1509_512, RNA1509_7156} {RNA1310_54087, RNA1509_512, RNA1509_7156} {RNA1509_512, RNA1509_7156, RNA815_12035.2} | |
| 9. | MligTC455_06440 | 16 | 0.34 | Mlig455_051822, Mlig455_065065 | Neo: - Age: - |
0.963 | - | - | - | - | - | 0.963 | Mlig455_051822 {REF} {Length: 335} {Celegans: WBGene00021449, mltn-7, MLt-TeN (Mlt-10) related, [Score=75.5, Expect=1e-17]} Mlig455_065065 {REF} {Length: 666} {NoTransDecoderORF} {RNA1509_54430} {RNA1310_51692} {RNA815_25852} |
|
| 10. | MligTC455_42964 | 179 | 3.73 | Mlig455_023682 | Neo: - Age: - |
TRPM1 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_023682 {REF} {Length: 4629} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=106.2]; Ankyrin repeats (many copies) [PF13637.8, score=82.9]; Ankyrin repeat [PF00023.32, score=71.9]; Ankyrin repeats (many copies) [PF13857.8, score=67.7]; Ankyrin repeat [PF13606.8, score=58.9]; Ion transport protein [PF00520.33, score=41.0]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=138, Expect=4e-32]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=137, Expect=4e-32]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=145, Expect=2e-34]} {Dmel: FBgn0260005, wtrw, water witch, [Score=73.9, Expect=6e-13]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=79.3, Expect=1e-14]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=179, Expect=1e-45]} {RNA1509_17450} {RNA1310_2662, RNA1509_17450} {RNA1509_17450, RNA815_1459} |
Berezikov Lab - 2020-2021 © ERIBA