Data search
Results for MligTC455_53432
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53432 | 952 | 19.83 | Mlig455_047461 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.306 Region-enriched R5: 1.698/0.00082 |
LMO4 | Mlig455_047461 {REF} {Length: 1824} {Pfam: LIM domain [PF00412.24, score=91.0]} {Human: ENSG00000143013, LMO4, LIM domain only 4, [Score=133, Expect=2e-38]} {Mouse: ENSMUSG00000028266, Lmo4, LIM domain only 4, [Score=133, Expect=2e-38]} {Dmel: FBgn0032196, CG5708, [Score=115, Expect=9e-31]} {Celegans: WBGene00006654, ttx-3, LIM/homeobox protein ttx-3, [Score=71.2, Expect=6e-14]} {Smed: dd_Smed_v6_27625_0_1, dd_Smed_v6_27625_0_1, [Score=99.4, Expect=5e-25]} {RNA1509_7368} {RNA1310_20349.1} {RNA815_4654.1} |
Cumulative graph for MligTC455_53432
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.137 | 4.543 | 0.34001 | 0.98508 | |
| RegionR2 | 0.349 | 4.543 | 0.55933 | 0.92197 | |
| RegionR3 | -0.615 | 4.543 | 0.23126 | 0.77293 | |
| RegionR4 | -1.113 | 4.543 | 0.06323 | 0.22603 | |
| RegionR5 | 1.698 | 4.543 | 0.00004 | 0.00082 | |
| RegionR6 | 0.545 | 4.543 | 0.25027 | 0.83653 | |
| RegionR7 | 0.308 | 4.543 | 0.57304 | 1.00000 | |
| RegionR8 | -0.035 | 4.543 | 0.95923 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.138 | 4.543 | 0.42338 | 1.00000 | |
| RegenerationR2 | -0.011 | 4.543 | 0.98479 | 1.00000 | |
| RegenerationR3 | 0.896 | 4.543 | 0.15896 | 0.59097 | |
| RegenerationR4 | 0.798 | 4.543 | 0.21552 | 0.66252 | |
| RegenerationR5 | -0.749 | 4.543 | 0.19294 | 0.62425 | |
| RegenerationR6 | -0.638 | 4.543 | 0.29662 | 0.64708 | |
| RegenerationBL | 0.497 | 4.543 | 0.38324 | 0.75176 | |
| RegenerationTP | 0.06 | 4.543 | 0.92626 | 1.00000 |
Genes with expression patterns similar to MligTC455_53432
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53432 | 952 | 19.83 | Mlig455_047461 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.306 Region-enriched R5: 1.698/0.00082 |
LMO4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_047461 {REF} {Length: 1824} {Pfam: LIM domain [PF00412.24, score=91.0]} {Human: ENSG00000143013, LMO4, LIM domain only 4, [Score=133, Expect=2e-38]} {Mouse: ENSMUSG00000028266, Lmo4, LIM domain only 4, [Score=133, Expect=2e-38]} {Dmel: FBgn0032196, CG5708, [Score=115, Expect=9e-31]} {Celegans: WBGene00006654, ttx-3, LIM/homeobox protein ttx-3, [Score=71.2, Expect=6e-14]} {Smed: dd_Smed_v6_27625_0_1, dd_Smed_v6_27625_0_1, [Score=99.4, Expect=5e-25]} {RNA1509_7368} {RNA1310_20349.1} {RNA815_4654.1} |
| 2. | MligTC455_46852 | 669 | 13.95 | Mlig455_000973 | Neo: - Age: logFC(26M/2M)=0.296 Region-enriched R5: 1.717/0.00000 |
1.802 | - | - | 0.815 | - | - | 0.987 | Mlig455_000973 {REF} {Length: 2358} {TRANSSPLICED} {Pfam: ATP synthase E chain [PF05680.14, score=51.6]} {Smed: dd_Smed_v6_943_0_1, dd_Smed_v6_943_0_1, [RH, Score=61.2, Expect=6e-12]} {RNA1509_48439} {RNA1310_23642, RNA1509_48439} {RNA1509_48439, RNA815_5620.1} | |
| 3. | MligTC455_50331 | 348 | 7.26 | Mlig455_045355 | Neo: Irradiation Age: Up-Down-Down Region-enriched R2: 1.911/0.04277 |
TGFBR1 | 1.729 | 0.769 | - | 0.960 | - | - | - | Mlig455_045355 {REF} {Length: 2444} {Pfam: Protein kinase domain [PF00069.27, score=69.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=68.4]; ABC1 atypical kinase-like domain [PF03109.18, score=32.2]; Transforming growth factor beta type I GS-motif [PF08515.14, score=20.5]} {Human: ENSG00000106799, TGFBR1, transforming growth factor beta receptor 1, [Score=180, Expect=8e-51]; ENSG00000135503, ACVR1B, activin A receptor type 1B, [Score=174, Expect=1e-48]} {Mouse: ENSMUSG00000007613, Tgfbr1, transforming growth factor, beta receptor I, [Score=181, Expect=1e-51]; ENSMUSG00000000532, Acvr1b, activin A receptor, type 1B, [Score=174, Expect=2e-48]} {Dmel: FBgn0011300, babo, baboon, [Score=180, Expect=5e-50]} {Celegans: WBGene00000897, daf-1, Cell surface receptor daf-1, [Score=142, Expect=4e-36]} {Smed: dd_Smed_v6_3426_0_1, dd_Smed_v6_3426_0_1, [Score=177, Expect=8e-49]} {RNA1509_17304, RNA1509_34135} {RNA1310_10744, RNA1509_34135} {RNA1509_34135, RNA815_11070} |
| 4. | MligTC455_33742 | 1559 | 32.49 | Mlig455_053717 | Neo: - Age: - Region-enriched R4: 1.046/0.02526 |
GUK1 | 1.722 | - | - | 0.754 | 0.968 | - | - | Mlig455_053717 {REF} {Length: 4742} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=179.6]; AAA domain [PF13671.8, score=28.4]; AAA domain [PF13238.8, score=28.0]; AAA domain [PF13401.8, score=24.3]; AAA ATPase domain [PF13191.8, score=23.3]; RsgA GTPase [PF03193.18, score=20.9]} {Human: ENSG00000143774, GUK1, guanylate kinase 1, [Score=196, Expect=1e-63]} {Mouse: ENSMUSG00000020444, Guk1, guanylate kinase 1, [Score=185, Expect=3e-59]} {Dmel: FBgn0036099, CG11811, [Score=159, Expect=5e-49]} {Celegans: WBGene00020190, guk-1, GUanylate Kinase, [Score=178, Expect=1e-56]} {Smed: dd_Smed_v6_4875_0_1, dd_Smed_v6_4875_0_1, [Score=182, Expect=2e-58]} {RNA1509_27690, RNA1509_32316, RNA1509_45125, RNA1509_48012, RNA1509_55646} {RNA1310_13151.1, RNA1509_27690, RNA1509_32316, RNA1509_45125, RNA1509_55646} {RNA1509_27690, RNA1509_32316, RNA1509_45125, RNA1509_55646, RNA815_11102} |
| 5. | MligTC455_28576 | 165 | 3.44 | Mlig455_007893 | Neo: - Age: Down-Up-Down |
NFYC | 1.719 | - | - | - | 0.766 | - | 0.953 | Mlig455_007893 {REF} {Length: 3192} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.8]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=45.4]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [RH, Score=147, Expect=8e-39]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [RH, Score=146, Expect=2e-39]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [RH, Score=135, Expect=4e-34]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=103, Expect=5e-25]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=166, Expect=4e-47]} {RNA1509_12703} {RNA1310_30593} {RNA815_29147} |
| 6. | MligTC455_12300 | 553 | 11.52 | Mlig455_029896 | Neo: - Age: - Region-enriched R5: 1.482/0.00763 |
RNF41 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_029896 {REF} {Length: 1414} {TRANSSPLICED} {Pfam: USP8 interacting [PF08941.12, score=192.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=42.1]; Ring finger domain [PF13639.8, score=37.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=34.4]; RING-type zinc-finger [PF13445.8, score=29.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.2]; RING-H2 zinc finger domain [PF12678.9, score=24.9]; Seven in absentia protein family [PF03145.18, score=23.3]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.2]; zinc RING finger of MSL2 [PF16685.7, score=23.0]; U-box domain [PF04564.17, score=21.5]; zf-RING of BARD1-type protein [PF14835.8, score=21.5]; zinc-RING finger domain [PF14634.8, score=19.8]} {Human: ENSG00000181852, RNF41, ring finger protein 41, [RH, Score=341, Expect=5e-117]} {Mouse: ENSMUSG00000025373, Rnf41, ring finger protein 41, [RH, Score=342, Expect=3e-117]} {Dmel: FBgn0283649, elgi, early girl, [RH, Score=333, Expect=3e-114]} {Smed: dd_Smed_v6_5173_0_1, dd_Smed_v6_5173_0_1, [RH, Score=297, Expect=2e-100]} {RNA1509_21556} {RNA1310_6528} {RNA815_23552} |
| 7. | MligTC455_44569 | 311 | 6.48 | Mlig455_050289 | Neo: - Age: Down-Up-Down |
PARL | 0.968 | - | - | - | - | - | 0.968 | Mlig455_050289 {REF} {Length: 2352} {TRANSSPLICED} {Pfam: Rhomboid family [PF01694.24, score=30.8]} {Human: ENSG00000175193, PARL, presenilin associated rhomboid like, [Score=48.9, Expect=8e-06]} {Mouse: ENSMUSG00000033918, Parl, presenilin associated, rhomboid-like, [Score=49.7, Expect=4e-06]} {RNA1509_23398, RNA1509_32773, RNA1509_55819} {RNA1310_18994.1, RNA1509_23398, RNA1509_55819} {RNA1509_23398, RNA1509_55819, RNA815_19436} |
| 8. | MligTC455_51529 | 971 | 20.22 | Mlig455_048820 | Neo: - Age: logFC(26M/2M)=0.322 Region-enriched R5: 1.252/0.02512 |
PPP1R3C | 0.962 | - | - | - | - | - | 0.962 | Mlig455_048820 {REF} {Length: 2011} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=91.2]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=59.8]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [RH, Score=117, Expect=2e-29]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [RH, Score=110, Expect=2e-27]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=110, Expect=2e-27]} {Smed: dd_Smed_v6_1526_0_1, dd_Smed_v6_1526_0_1, [RH, Score=91.3, Expect=7e-21]} {RNA1509_3230} {RNA1310_14103, RNA1509_3230} {RNA1509_3230, RNA815_5179} |
| 9. | MligTC455_51528 | 921 | 19.18 | Mlig455_020631 | Neo: - Age: - Region-enriched R5: 1.263/0.02274 |
0.958 | - | - | - | - | - | 0.958 | Mlig455_020631 {REF} {Length: 1347} {RNA1509_3230} {RNA1310_14103} {RNA815_5179} |
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