Data search
Results for MligTC455_50331
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_50331 | 348 | 7.26 | Mlig455_045355 | Neo: Irradiation Age: Up-Down-Down Region-enriched R2: 1.911/0.04277 |
TGFBR1 | Mlig455_045355 {REF} {Length: 2444} {Pfam: Protein kinase domain [PF00069.27, score=69.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=68.4]; ABC1 atypical kinase-like domain [PF03109.18, score=32.2]; Transforming growth factor beta type I GS-motif [PF08515.14, score=20.5]} {Human: ENSG00000106799, TGFBR1, transforming growth factor beta receptor 1, [Score=180, Expect=8e-51]; ENSG00000135503, ACVR1B, activin A receptor type 1B, [Score=174, Expect=1e-48]} {Mouse: ENSMUSG00000007613, Tgfbr1, transforming growth factor, beta receptor I, [Score=181, Expect=1e-51]; ENSMUSG00000000532, Acvr1b, activin A receptor, type 1B, [Score=174, Expect=2e-48]} {Dmel: FBgn0011300, babo, baboon, [Score=180, Expect=5e-50]} {Celegans: WBGene00000897, daf-1, Cell surface receptor daf-1, [Score=142, Expect=4e-36]} {Smed: dd_Smed_v6_3426_0_1, dd_Smed_v6_3426_0_1, [Score=177, Expect=8e-49]} {RNA1509_17304, RNA1509_34135} {RNA1310_10744, RNA1509_34135} {RNA1509_34135, RNA815_11070} |
Cumulative graph for MligTC455_50331
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.723 | 3.265 | 0.06280 | 0.57136 | |
| RegionR2 | 1.911 | 3.265 | 0.00266 | 0.04277 | |
| RegionR3 | -0.251 | 3.265 | 0.63149 | 1.00000 | |
| RegionR4 | -0.812 | 3.265 | 0.16664 | 0.42826 | |
| RegionR5 | 1.493 | 3.265 | 0.00012 | 0.00190 | |
| RegionR6 | 0.502 | 3.265 | 0.31198 | 0.90143 | |
| RegionR7 | 0.24 | 3.265 | 0.71216 | 1.00000 | |
| RegionR8 | -0.359 | 3.265 | 0.69076 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.584 | 3.265 | 0.07175 | 0.75516 | |
| RegenerationR2 | -0.36 | 3.265 | 0.47823 | 0.86237 | |
| RegenerationR3 | 0.97 | 3.265 | 0.10468 | 0.51238 | |
| RegenerationR4 | 0.266 | 3.265 | 0.65208 | 0.93429 | |
| RegenerationR5 | -0.137 | 3.265 | 0.77853 | 0.98133 | |
| RegenerationR6 | 0.268 | 3.265 | 0.66391 | 0.90567 | |
| RegenerationBL | 0.542 | 3.265 | 0.51474 | 0.87800 | |
| RegenerationTP | 0.115 | 3.265 | 0.90569 | 1.00000 |
Genes with expression patterns similar to MligTC455_50331
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_50331 | 348 | 7.26 | Mlig455_045355 | Neo: Irradiation Age: Up-Down-Down Region-enriched R2: 1.911/0.04277 |
TGFBR1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_045355 {REF} {Length: 2444} {Pfam: Protein kinase domain [PF00069.27, score=69.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=68.4]; ABC1 atypical kinase-like domain [PF03109.18, score=32.2]; Transforming growth factor beta type I GS-motif [PF08515.14, score=20.5]} {Human: ENSG00000106799, TGFBR1, transforming growth factor beta receptor 1, [Score=180, Expect=8e-51]; ENSG00000135503, ACVR1B, activin A receptor type 1B, [Score=174, Expect=1e-48]} {Mouse: ENSMUSG00000007613, Tgfbr1, transforming growth factor, beta receptor I, [Score=181, Expect=1e-51]; ENSMUSG00000000532, Acvr1b, activin A receptor, type 1B, [Score=174, Expect=2e-48]} {Dmel: FBgn0011300, babo, baboon, [Score=180, Expect=5e-50]} {Celegans: WBGene00000897, daf-1, Cell surface receptor daf-1, [Score=142, Expect=4e-36]} {Smed: dd_Smed_v6_3426_0_1, dd_Smed_v6_3426_0_1, [Score=177, Expect=8e-49]} {RNA1509_17304, RNA1509_34135} {RNA1310_10744, RNA1509_34135} {RNA1509_34135, RNA815_11070} |
| 2. | MligTC455_53432 | 952 | 19.83 | Mlig455_047461 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.306 Region-enriched R5: 1.698/0.00082 |
LMO4 | 1.729 | 0.769 | - | 0.960 | - | - | - | Mlig455_047461 {REF} {Length: 1824} {Pfam: LIM domain [PF00412.24, score=91.0]} {Human: ENSG00000143013, LMO4, LIM domain only 4, [Score=133, Expect=2e-38]} {Mouse: ENSMUSG00000028266, Lmo4, LIM domain only 4, [Score=133, Expect=2e-38]} {Dmel: FBgn0032196, CG5708, [Score=115, Expect=9e-31]} {Celegans: WBGene00006654, ttx-3, LIM/homeobox protein ttx-3, [Score=71.2, Expect=6e-14]} {Smed: dd_Smed_v6_27625_0_1, dd_Smed_v6_27625_0_1, [Score=99.4, Expect=5e-25]} {RNA1509_7368} {RNA1310_20349.1} {RNA815_4654.1} |
| 3. | MligTC455_40611 | 329 | 6.85 | Mlig455_020152 | Neo: Irradiation Age: - Region-specific R5: 3.757 Region-enriched R5: 3.286/0.00000 |
0.972 | 0.972 | - | - | - | - | - | Mlig455_020152 {REF} {Length: 3504} {TRANSSPLICED} {RNA1509_43395} {RNA1310_3363, RNA1509_43395} {RNA1509_43395, RNA815_12902} | |
| 4. | MligTC455_42121 | 828 | 17.25 | Mlig455_020232 | Neo: - Age: - |
MOB2 | 0.969 | - | - | - | - | 0.969 | - | Mlig455_020232 {REF} {Length: 1206} {TRANSSPLICED} {Pfam: Mob1/phocein family [PF03637.19, score=113.6]} {Human: ENSG00000182208, MOB2, MOB kinase activator 2, [Score=110, Expect=5e-29]} {Mouse: ENSMUSG00000006262, Mob1b, MOB kinase activator 1B, [Score=89.7, Expect=1e-21]; ENSMUSG00000043131, Mob1a, MOB kinase activator 1A, [Score=88.2, Expect=5e-21]} {Dmel: FBgn0259482, Mob3, MOB kinase activator 3, [Score=78.6, Expect=2e-17]} {Celegans: WBGene00020447, mob-3, [Score=75.5, Expect=4e-16]} {Smed: dd_Smed_v6_13787_0_1, dd_Smed_v6_13787_0_1, [RH, Score=132, Expect=5e-38]} {RNA1509_25220, RNA1509_54726} {RNA1310_20183.2, RNA1509_25220, RNA1509_54726} {RNA1509_25220, RNA1509_54726, RNA815_10855.1} |
| 5. | MligTC455_41444 | 445 | 9.26 | Mlig455_001547 | Neo: Irradiation Age: Up-Up-Down |
TRIM3 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_001547 {REF} {Length: 5402} {Pfam: NHL repeat [PF01436.23, score=78.7]; B-box zinc finger [PF00643.26, score=43.4]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=123, Expect=3e-28]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=122, Expect=4e-28]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=459, Expect=1e-144]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=223, Expect=3e-61]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=556, Expect=0.0]} {RNA1509_4482} {RNA1310_1955, RNA1509_4482} {RNA1509_4482, RNA815_2913.1} |
| 6. | MligTC455_06391 | 1026 | 21.37 | Mlig455_062730 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.011/0.01080 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_062730 {REF} {Length: 2469} {Pfam: R3H-associated N-terminal domain [PF13902.8, score=34.1]} {RNA1509_18629} {RNA1310_30621, RNA1509_18629} {RNA1509_18629, RNA815_27499} | |
| 7. | MligTC455_08709 | 35 | 0.72 | Mlig455_057110 | Neo: - Age: - |
PCDHA13 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_057110 {REF} {Length: 4248} {Pfam: Cadherin domain [PF00028.19, score=213.8]; Cadherin-like [PF16184.7, score=23.5]} {Human: ENSG00000239389, PCDHA13, protocadherin alpha 13, [Score=221, Expect=6e-59]; ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=217, Expect=1e-56]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=216, Expect=1e-56]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=214, Expect=7e-56]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=204, Expect=3e-53]} {Dmel: FBgn0001075, ft, fat, [Score=152, Expect=1e-36]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=107, Expect=3e-23]} {Smed: dd_Smed_v6_13040_0_1, dd_Smed_v6_13040_0_1, [Score=301, Expect=6e-86]} {RNA1509_59255} {RNA1310_30001} {RNA815_31666} |
| 8. | MligTC455_37876 | 1905 | 39.68 | Mlig455_025693 | Neo: - Age: logFC(26M/2M)=0.314 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_025693 {REF} {Length: 2210} {RNA1509_27839, RNA1509_4444, RNA1509_7821} {RNA1310_3967, RNA1509_27839, RNA1509_4444} {RNA1509_27839, RNA1509_4444, RNA815_2321.1} | |
| 9. | MligTC455_28640 | 1584 | 33 | Mlig455_048248 | Neo: - |
RNF213 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_048248 {REF} {Length: 17851} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=28.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=20.8]; P-loop containing dynein motor region [PF12775.9, score=20.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=19.3]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=1192, Expect=0.0]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=1167, Expect=0.0]} {RNA1509_1262, RNA1509_30585, RNA1509_34013, RNA1509_42379, RNA1509_5517, RNA1509_56737} {RNA1310_22, RNA1509_1262, RNA1509_30585, RNA1509_34013, RNA1509_42379, RNA1509_5517, RNA1509_56737} {RNA1509_1262, RNA1509_30585, RNA1509_34013, RNA1509_42379, RNA1509_5517, RNA1509_56737, RNA815_15} |
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