TomoSeq data search

Data search

Results for MligTC455_53516

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_53516

301

6.26

Mlig455_042461

Neo: -

Age: -

PHYHD1

Mlig455_042461 {REF} {Length: 2483} {TRANSSPLICED} {Pfam: Phytanoyl-CoA dioxygenase (PhyH) [PF05721.15, score=108.4]} {Human: ENSG00000175287, PHYHD1, phytanoyl-CoA dioxygenase domain containing 1, [Score=72.4, Expect=4e-14]} {Mouse: ENSMUSG00000079484, Phyhd1, phytanoyl-CoA dioxygenase domain containing 1, [Score=67.0, Expect=2e-12]} {Celegans: WBGene00013650, Y105C5B.9, Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog, [Score=59.3, Expect=5e-10]} {Smed: dd_Smed_v6_1292_0_1, dd_Smed_v6_1292_0_1, [RH, Score=285, Expect=4e-96]} {RNA1509_59515} {RNA1310_29715} {RNA815_13679}

Cumulative graph for MligTC455_53516

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.036	3.208	0.09396	0.65574
RegionR2	1.78	3.208	0.01407	0.12456
RegionR3	1.013	3.208	0.05947	0.42962
RegionR4	-1.306	3.208	0.10079	0.30903
RegionR5	-0.458	3.208	0.41738	0.77696
RegionR6	0.372	3.208	0.53084	1.00000
RegionR7	0.831	3.208	0.20599	0.81669
RegionR8	0.805	3.208	0.31638	0.94934

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.484	3.208	0.77910	1.00000
RegenerationR2	-0.359	3.208	0.58373	0.90846
RegenerationR3	-0.285	3.208	0.70890	0.95121
RegenerationR4	0.094	3.208	0.90376	1.00000
RegenerationR5	0.532	3.208	0.42827	0.81679
RegenerationR6	-0.179	3.208	0.82765	0.98980
RegenerationBL	-1.66	3.208	0.19766	0.53475
RegenerationTP	0.199	3.208	0.81336	1.00000

Genes with expression patterns similar to MligTC455_53516

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_53516	301	6.26	Mlig455_042461	Neo: - Age: -	PHYHD1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_042461 {REF} {Length: 2483} {TRANSSPLICED} {Pfam: Phytanoyl-CoA dioxygenase (PhyH) [PF05721.15, score=108.4]} {Human: ENSG00000175287, PHYHD1, phytanoyl-CoA dioxygenase domain containing 1, [Score=72.4, Expect=4e-14]} {Mouse: ENSMUSG00000079484, Phyhd1, phytanoyl-CoA dioxygenase domain containing 1, [Score=67.0, Expect=2e-12]} {Celegans: WBGene00013650, Y105C5B.9, Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog, [Score=59.3, Expect=5e-10]} {Smed: dd_Smed_v6_1292_0_1, dd_Smed_v6_1292_0_1, [RH, Score=285, Expect=4e-96]} {RNA1509_59515} {RNA1310_29715} {RNA815_13679}
2.	MligTC455_53515	665	13.86	Mlig455_042391	Neo: - Age: -	PHYHD1	2.72	0.961	0.896	-	0.863	-	-	Mlig455_042391 {REF} {Length: 1915} {TRANSSPLICED} {Pfam: Phytanoyl-CoA dioxygenase (PhyH) [PF05721.15, score=108.4]} {Human: ENSG00000175287, PHYHD1, phytanoyl-CoA dioxygenase domain containing 1, [Score=69.3, Expect=5e-13]} {Mouse: ENSMUSG00000079484, Phyhd1, phytanoyl-CoA dioxygenase domain containing 1, [Score=63.9, Expect=3e-11]} {Celegans: WBGene00013650, Y105C5B.9, Phytanoyl-CoA dioxygenase domain-containing protein 1 homolog, [Score=56.2, Expect=6e-09]} {Smed: dd_Smed_v6_1292_0_1, dd_Smed_v6_1292_0_1, [RH, Score=278, Expect=2e-93]} {RNA1509_15878, RNA1509_59515} {RNA1310_29715, RNA1509_15878, RNA1509_59515} {RNA1509_15878, RNA1509_59515, RNA815_13679}
3.	MligTC455_50646	258	5.37	Mlig455_069118	Neo: - Age: -	SCYL1	0.971	-	-	-	0.971	-	-	Mlig455_069118 {REF} {Length: 3667} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=41.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.1]; HEAT repeats [PF13646.8, score=32.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=27.4]; Protein kinase domain [PF00069.27, score=25.0]} {Human: ENSG00000142186, SCYL1, SCY1 like pseudokinase 1, [RH, Score=446, Expect=1e-144]} {Mouse: ENSMUSG00000024941, Scyl1, SCY1-like 1 (S. cerevisiae), [RH, Score=445, Expect=3e-144]} {Dmel: FBgn0260990, yata, [RH, Score=518, Expect=6e-172]} {Celegans: WBGene00012337, W07G4.3, [RH, Score=409, Expect=9e-131]} {Smed: dd_Smed_v6_3470_0_1, dd_Smed_v6_3470_0_1, [RH, Score=461, Expect=2e-152]} {RNA1509_23084} {RNA1310_4140} {RNA815_4060}
4.	MligTC455_32845	1108	23.08	Mlig455_045530	Neo: - Age: logFC(26M/2M)=0.181	XPNPEP1	0.967	-	-	-	0.967	-	-	Mlig455_045530 {REF} {Length: 2956} {TRANSSPLICED} {Pfam: Metallopeptidase family M24 [PF00557.26, score=141.0]; Creatinase/Prolidase N-terminal domain [PF16189.7, score=105.5]; Creatinase/Prolidase N-terminal domain [PF01321.20, score=85.5]; C-terminal region of peptidase_M24 [PF16188.7, score=79.8]} {Human: ENSG00000108039, XPNPEP1, X-prolyl aminopeptidase 1, [RH, Score=540, Expect=0.0]} {Mouse: ENSMUSG00000025027, Xpnpep1, X-prolyl aminopeptidase (aminopeptidase P) 1, soluble, [RH, Score=534, Expect=0.0]} {Dmel: FBgn0026150, ApepP, Aminopeptidase P, [RH, Score=457, Expect=2e-154]} {Celegans: WBGene00000155, app-1, Xaa-Pro aminopeptidase app-1, [RH, Score=439, Expect=4e-147]} {Smed: dd_Smed_v6_4029_0_1, dd_Smed_v6_4029_0_1, [RH, Score=493, Expect=2e-168]} {RNA1509_11288, RNA1509_17092, RNA1509_20213, RNA1509_28257, RNA1509_49860, RNA1509_50061} {RNA1310_14022.2, RNA1509_11288, RNA1509_17092, RNA1509_20213, RNA1509_28257, RNA1509_49860, RNA1509_50061} {RNA1509_11288, RNA1509_17092, RNA1509_20213, RNA1509_28257, RNA1509_49860, RNA1509_50061, RNA815_8183.1}
5.	MligTC455_52270	496	10.34	Mlig455_042014	Neo: - Age: -	LONP1	0.967	-	-	-	0.967	-	-	Mlig455_042014 {REF} {Length: 4054} {TRANSSPLICED} {Pfam: Lon protease (S16) C-terminal proteolytic domain [PF05362.15, score=219.0]; ATP-dependent protease La (LON) substrate-binding domain [PF02190.18, score=96.2]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=85.0]; Subunit ChlI of Mg-chelatase [PF13541.8, score=40.2]; AAA domain (dynein-related subfamily) [PF07728.16, score=36.3]; AAA domain (Cdc48 subfamily) [PF07724.16, score=32.4]; AAA ATPase domain [PF13191.8, score=28.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=26.3]; AAA domain [PF13401.8, score=23.5]; PrkA AAA domain [PF08298.13, score=22.9]; AAA domain [PF13173.8, score=20.9]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=19.2]} {Human: ENSG00000196365, LONP1, lon peptidase 1, mitochondrial, [RH, Score=1087, Expect=0.0]} {Mouse: ENSMUSG00000041168, Lonp1, lon peptidase 1, mitochondrial, [RH, Score=1100, Expect=0.0]} {Dmel: FBgn0036892, Lon, Lon protease, [RH, Score=1037, Expect=0.0]} {Celegans: WBGene00016391, lonp-1, Lon protease homolog, mitochondrial, [RH, Score=890, Expect=0.0]} {Smed: dd_Smed_v6_3971_0_1, dd_Smed_v6_3971_0_1, [RH, Score=1079, Expect=0.0]} {RNA1509_14560, RNA1509_51563} {RNA1310_4395, RNA1509_51563} {RNA1509_51563, RNA815_653}
6.	MligTC455_04755	469	9.78	Mlig455_062090	Neo: - Age: -		0.96	-	-	-	0.960	-	-	Mlig455_062090 {REF} {Length: 1772} {TRANSSPLICED} {Pfam: Rogdi leucine zipper containing protein [PF10259.11, score=68.8]} {Dmel: FBgn0036697, rogdi, [Score=92.0, Expect=5e-22]} {RNA1509_19519, RNA1509_38112, RNA1509_39732} {RNA1310_1211.1, RNA1509_19519, RNA1509_38112, RNA1509_39732} {RNA1509_19519, RNA1509_38112, RNA1509_39732, RNA815_15966}
7.	MligTC455_12534	1611	33.55	Mlig455_046860	Neo: Int S/G2/M Age: -	NOP53	0.958	-	-	-	0.958	-	-	Mlig455_046860 {REF} {Length: 1829} {TRANSSPLICED} {Pfam: Nop53 (60S ribosomal biogenesis) [PF07767.13, score=161.6]} {Human: ENSG00000105373, NOP53, NOP53 ribosome biogenesis factor, [RH, Score=121, Expect=2e-29]} {Mouse: ENSMUSG00000041560, Nop53, NOP53 ribosome biogenesis factor, [RH, Score=117, Expect=2e-28]} {Dmel: FBgn0030061, CG1785, [RH, Score=82.4, Expect=1e-16]} {Celegans: WBGene00012692, Y39B6A.33, [RH, Score=53.9, Expect=1e-07]} {RNA1509_22656, RNA1509_4085} {RNA1310_16335, RNA1509_22656, RNA1509_4085} {RNA1509_22656, RNA1509_4085, RNA815_6216}
8.	MligTC455_23466	163	3.4	Mlig455_014791	Neo: Int S/G2/M Age: - Region-enriched R4: 2.862/0.01156	AURKA	0.958	-	-	-	0.958	-	-	Mlig455_014791 {REF} {Length: 1803} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=229.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=136.7]; Kinase-like [PF14531.8, score=25.2]} {Human: ENSG00000087586, AURKA, aurora kinase A, [RH, Score=350, Expect=4e-119]; ENSG00000105146, AURKC, aurora kinase C, [RH, Score=337, Expect=2e-115]} {Mouse: ENSMUSG00000027496, Aurka, aurora kinase A, [RH, Score=352, Expect=3e-120]; ENSMUSG00000020897, Aurkb, aurora kinase B, [RH, Score=346, Expect=2e-118]} {Dmel: FBgn0000147, aurA, aurora A, [RH, Score=308, Expect=1e-102]} {Celegans: WBGene00000099, air-2, Aurora/IPL1-related protein kinase 2, [RH, Score=334, Expect=9e-115]} {Smed: dd_Smed_v6_9065_0_1, dd_Smed_v6_9065_0_1, [RH, Score=271, Expect=2e-90]} {RNA1509_12454} {RNA1310_14817, RNA1509_12454} {RNA1509_12454, RNA815_6263}
9.	MligTC455_15629	415	8.65	Mlig455_004619	Neo: Neoblast, stringent Age: - Region-enriched R5: 1.273/0.00412 Regeneration-upregulated R3: 2.136 Regeneration-enriched R3: 2.136	MCM2	0.956	-	-	-	0.956	-	-	Mlig455_004619 {REF} {Length: 4217} {TRANSSPLICED} {Pfam: MCM P-loop domain [PF00493.25, score=330.2]; MCM OB domain [PF17207.5, score=130.7]; MCM AAA-lid domain [PF17855.3, score=109.4]; Mini-chromosome maintenance protein 2 [PF12619.10, score=55.8]; MCM N-terminal domain [PF14551.8, score=50.1]; Magnesium chelatase, subunit ChlI [PF01078.23, score=34.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=18.6]} {Human: ENSG00000073111, MCM2, minichromosome maintenance complex component 2, [RH, Score=1056, Expect=0.0]} {Mouse: ENSMUSG00000002870, Mcm2, minichromosome maintenance complex component 2, [RH, Score=1046, Expect=0.0]} {Dmel: FBgn0014861, Mcm2, Minichromosome maintenance 2, [RH, Score=991, Expect=0.0]} {Celegans: WBGene00003154, mcm-2, Yeast MCM (Licensing factor) related, [RH, Score=895, Expect=0.0]} {Smed: dd_Smed_v6_7682_0_1, dd_Smed_v6_7682_0_1, [RH, Score=915, Expect=0.0]} {RNA1509_3101} {RNA1310_746.2} {RNA815_2497}
10.	MligTC455_43278	1082	22.55	Mlig455_029717	Neo: Neoblast Age: logFC(26M/2M)=0.298		0.955	-	-	-	0.955	-	-	Mlig455_029717 {REF} {Length: 2174} {TRANSSPLICED} {RNA1509_8103} {RNA1310_6457, RNA1509_8103} {RNA1509_8103, RNA815_11775}
11.	MligTC455_04754	453	9.43	Mlig455_040547	Neo: - Age: logFC(26M/2M)=0.893		0.954	-	-	-	0.954	-	-	Mlig455_040547 {REF} {Length: 1120} {RNA1509_39732} {RNA1310_1334} {RNA815_47344.2}
12.	MligTC455_37612	366	7.62	Mlig455_026659	Neo: Int S/G2/M Age: - Region-enriched R5: 3.326/0.00001		0.954	-	-	-	0.954	-	-	Mlig455_026659 {REF} {Length: 1882} {TRANSSPLICED} {RNA1509_32576, RNA1509_34929} {RNA1310_30559.1, RNA1509_32576, RNA1509_34929} {RNA1509_32576, RNA1509_34929, RNA815_13235.1}
13.	MligTC455_45133	1102	22.97	Mlig455_029424	Neo: - Age: Up-Down-Down	LAMC1	0.954	-	-	-	0.954	-	-	Mlig455_029424 {REF} {Length: 4934} {Pfam: Laminin EGF domain [PF00053.26, score=234.3]; Laminin B (Domain IV) [PF00052.20, score=43.2]} {Human: ENSG00000135862, LAMC1, laminin subunit gamma 1, [Score=687, Expect=0.0]; ENSG00000050555, LAMC3, laminin subunit gamma 3, [Score=654, Expect=0.0]} {Mouse: ENSMUSG00000026478, Lamc1, laminin, gamma 1, [Score=681, Expect=0.0]; ENSMUSG00000026840, Lamc3, laminin gamma 3, [Score=647, Expect=0.0]} {Dmel: FBgn0267348, LanB2, Laminin B2, [Score=704, Expect=0.0]} {Celegans: WBGene00016913, lam-2, Laminin-like protein lam-2, [Score=644, Expect=0.0]} {Smed: dd_Smed_v6_7359_0_1, dd_Smed_v6_7359_0_1, [Score=608, Expect=0.0]} {RNA1509_19604} {RNA1310_816} {RNA815_1605}
14.	MligTC455_52806	65	1.35	Mlig455_061262	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_061262 {REF} {Length: 3333} {NoTransDecoderORF} {RNA1509_33264} {RNA1310_69399} {RNA815_9413.5}
15.	MligTC455_43279	970	20.21	Mlig455_034863	Neo: - Age: -		0.953	-	-	-	0.953	-	-	Mlig455_034863 {REF} {Length: 2744} {RNA1509_8103} {RNA1310_6457} {RNA815_11775}
16.	MligTC455_11239	440	9.17	Mlig455_061960	Neo: - Age: -	PDCD6	0.95	-	-	-	0.950	-	-	Mlig455_061960 {REF} {Length: 1775} {TRANSSPLICED} {Pfam: EF hand [PF00036.34, score=78.9]; EF-hand domain pair [PF13833.8, score=78.7]; EF-hand domain pair [PF13499.8, score=76.6]; EF-hand domain [PF13405.8, score=73.8]; EF hand [PF13202.8, score=51.4]; EF-hand domain [PF14658.8, score=23.0]} {Human: ENSG00000249915, PDCD6, programmed cell death 6, [RH, Score=229, Expect=6e-77]} {Mouse: ENSMUSG00000021576, Pdcd6, programmed cell death 6, [RH, Score=228, Expect=1e-76]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [RH, Score=244, Expect=3e-83]} {Celegans: WBGene00019770, M04F3.4, [RH, Score=207, Expect=5e-69]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [RH, Score=253, Expect=3e-87]} {RNA1509_12324} {RNA1310_41711, RNA1509_12324} {RNA1509_12324, RNA815_22756}

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