Data search
Results for MligTC455_53705
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53705 | 458 | 9.55 | Mlig455_025924 | Neo: - Age: - |
GTF2F2 | Mlig455_025924 {REF} {Length: 1877} {TRANSSPLICED} {Pfam: TFIIF, beta subunit HTH domain [PF02270.17, score=79.6]; TFIIF, beta subunit N-terminus [PF17683.3, score=39.8]} {Human: ENSG00000188342, GTF2F2, general transcription factor IIF subunit 2, [RH, Score=176, Expect=5e-53]} {Mouse: ENSMUSG00000067995, Gtf2f2, general transcription factor IIF, polypeptide 2, [RH, Score=174, Expect=1e-52]} {Dmel: FBgn0010421, TfIIFbeta, Transcription factor TFIIFbeta, [RH, Score=163, Expect=3e-48]} {Celegans: WBGene00012694, Y39B6A.36, General transcription factor IIF subunit 2, [Score=126, Expect=3e-34]} {Smed: dd_Smed_v6_2142_0_1, dd_Smed_v6_2142_0_1, [RH, Score=93.6, Expect=5e-22]} {RNA1509_11554, RNA1509_45734} {RNA1310_14522, RNA1509_11554, RNA1509_45734} {RNA1509_11554, RNA1509_45734, RNA815_1242.1} |
Cumulative graph for MligTC455_53705
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.262 | 3.639 | 0.84890 | 1.00000 | |
| RegionR2 | 0.269 | 3.639 | 0.64627 | 0.98272 | |
| RegionR3 | 0.038 | 3.639 | 0.93579 | 1.00000 | |
| RegionR4 | 0.319 | 3.639 | 0.56328 | 0.88287 | |
| RegionR5 | 0.991 | 3.639 | 0.00922 | 0.05440 | |
| RegionR6 | -0.163 | 3.639 | 0.72759 | 1.00000 | |
| RegionR7 | -0.047 | 3.639 | 0.93785 | 1.00000 | |
| RegionR8 | -1.145 | 3.639 | 0.17918 | 0.76137 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.215 | 3.639 | 0.46672 | 1.00000 | |
| RegenerationR2 | -0.114 | 3.639 | 0.81183 | 0.99349 | |
| RegenerationR3 | -0.122 | 3.639 | 0.81902 | 0.98723 | |
| RegenerationR4 | -0.581 | 3.639 | 0.28551 | 0.73050 | |
| RegenerationR5 | -0.133 | 3.639 | 0.77609 | 0.98039 | |
| RegenerationR6 | 0.169 | 3.639 | 0.75869 | 0.95612 | |
| RegenerationBL | 0.995 | 3.639 | 0.12480 | 0.41974 | |
| RegenerationTP | -0.248 | 3.639 | 0.75756 | 1.00000 |
Genes with expression patterns similar to MligTC455_53705
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53705 | 458 | 9.55 | Mlig455_025924 | Neo: - Age: - |
GTF2F2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_025924 {REF} {Length: 1877} {TRANSSPLICED} {Pfam: TFIIF, beta subunit HTH domain [PF02270.17, score=79.6]; TFIIF, beta subunit N-terminus [PF17683.3, score=39.8]} {Human: ENSG00000188342, GTF2F2, general transcription factor IIF subunit 2, [RH, Score=176, Expect=5e-53]} {Mouse: ENSMUSG00000067995, Gtf2f2, general transcription factor IIF, polypeptide 2, [RH, Score=174, Expect=1e-52]} {Dmel: FBgn0010421, TfIIFbeta, Transcription factor TFIIFbeta, [RH, Score=163, Expect=3e-48]} {Celegans: WBGene00012694, Y39B6A.36, General transcription factor IIF subunit 2, [Score=126, Expect=3e-34]} {Smed: dd_Smed_v6_2142_0_1, dd_Smed_v6_2142_0_1, [RH, Score=93.6, Expect=5e-22]} {RNA1509_11554, RNA1509_45734} {RNA1310_14522, RNA1509_11554, RNA1509_45734} {RNA1509_11554, RNA1509_45734, RNA815_1242.1} |
| 2. | MligTC455_53704 | 197 | 4.11 | Mlig455_025862 | Neo: - Age: Up-Down-Up Region-enriched R5: 1.567/0.04208 |
GTF2F2 | 1.859 | 0.960 | 0.899 | - | - | - | - | Mlig455_025862 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: TFIIF, beta subunit HTH domain [PF02270.17, score=79.3]; TFIIF, beta subunit N-terminus [PF17683.3, score=40.4]} {Human: ENSG00000188342, GTF2F2, general transcription factor IIF subunit 2, [RH, Score=176, Expect=3e-53]} {Mouse: ENSMUSG00000067995, Gtf2f2, general transcription factor IIF, polypeptide 2, [RH, Score=175, Expect=7e-53]} {Dmel: FBgn0010421, TfIIFbeta, Transcription factor TFIIFbeta, [RH, Score=164, Expect=3e-48]} {Celegans: WBGene00012694, Y39B6A.36, General transcription factor IIF subunit 2, [RH, Score=129, Expect=2e-35]} {Smed: dd_Smed_v6_2142_0_1, dd_Smed_v6_2142_0_1, [RH, Score=95.1, Expect=1e-22]} {RNA1509_11554} {RNA1310_14522} {RNA815_1242.1} |
| 3. | MligTC455_50413 | 1599 | 33.31 | Mlig455_009964 | Neo: Neoblast Age: Down-Down-Up |
SUMO3 | 1.772 | - | - | - | 0.819 | - | 0.953 | Mlig455_009964 {REF} {Length: 1094} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=76.8]; Ubiquitin family [PF00240.25, score=39.5]} {Human: ENSG00000184900, SUMO3, small ubiquitin-like modifier 3, [RH, Score=113, Expect=9e-34]; ENSG00000188612, SUMO2, small ubiquitin-like modifier 2, [RH, Score=111, Expect=6e-33]} {Mouse: ENSMUSG00000020265, Sumo3, small ubiquitin-like modifier 3, [RH, Score=115, Expect=1e-34]; ENSMUSG00000020738, Sumo2, small ubiquitin-like modifier 2, [RH, Score=111, Expect=4e-33]} {Dmel: FBgn0264922, smt3, [RH, Score=119, Expect=1e-36]} {Celegans: WBGene00004888, smo-1, Small ubiquitin-related modifier, [RH, Score=93.6, Expect=2e-26]} {Smed: dd_Smed_v6_265_0_1, dd_Smed_v6_265_0_1, [RH, Score=143, Expect=4e-46]} {RNA1509_36383, RNA1509_9891} {RNA1310_33911, RNA1509_36383} {RNA1509_36383, RNA815_5193} |
| 4. | MligTC455_54267 | 737 | 15.36 | Mlig455_051071 | Neo: Int S/G2/M Age: Up-Down-Up |
SUPT5H | 1.685 | 0.717 | - | - | 0.968 | - | - | Mlig455_051071 {REF} {Length: 5544} {TRANSSPLICED} {Pfam: KOW motif [PF00467.31, score=88.3]; Early transcription elongation factor of RNA pol II, NGN section [PF03439.15, score=86.4]; Spt5 transcription elongation factor, acidic N-terminal [PF11942.10, score=36.8]; Spt5 C-terminal nonapeptide repeat binding Spt4 [PF12815.9, score=33.2]} {Human: ENSG00000196235, SUPT5H, SPT5 homolog, DSIF elongation factor subunit, [RH, Score=805, Expect=0.0]} {Mouse: ENSMUSG00000003435, Supt5, suppressor of Ty 5, [RH, Score=808, Expect=0.0]} {Dmel: FBgn0040273, Spt5, [RH, Score=756, Expect=0.0]} {Celegans: WBGene00005015, spt-5, Transcription elongation factor SPT5, [RH, Score=572, Expect=0.0]} {Smed: dd_Smed_v6_3492_0_1, dd_Smed_v6_3492_0_1, [RH, Score=478, Expect=5e-152]} {RNA1509_2802} {RNA1310_3974.1} {RNA815_4949} |
| 5. | MligTC455_36746 | 584 | 12.16 | Mlig455_010816 | Neo: - Age: - |
SMU1 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_010816 {REF} {Length: 4670} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=125.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=65.4]; LisH-like dimerisation domain [PF17814.3, score=44.8]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=39.6]; Nucleoporin Nup120/160 [PF11715.10, score=33.1]} {Human: ENSG00000122692, SMU1, SMU1, DNA replication regulator and spliceosomal factor, [RH, Score=828, Expect=0.0]} {Mouse: ENSMUSG00000028409, Smu1, smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans), [RH, Score=828, Expect=0.0]} {Dmel: FBgn0038666, Smu1, Smu1 spliceosomal factor, [RH, Score=803, Expect=0.0]} {Celegans: WBGene00004895, smu-1, SMU-1; Suppressor of Mec and Unc defects, [RH, Score=667, Expect=0.0]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [RH, Score=790, Expect=0.0]} {RNA1509_23947, RNA1509_35954} {RNA1310_16357, RNA1509_23947, RNA1509_35954} {RNA1509_23947, RNA1509_35954, RNA815_7592} |
| 6. | MligTC455_37830 | 16 | 0.32 | Mlig455_038855 | Neo: - Age: - |
CHRNB4 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_038855 {REF} {Length: 1844} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=142.6]} {Human: ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [Score=150, Expect=1e-42]} {Mouse: ENSMUSG00000035200, Chrnb4, cholinergic receptor, nicotinic, beta polypeptide 4, [Score=142, Expect=1e-39]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=136, Expect=2e-37]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=156, Expect=4e-45]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=124, Expect=3e-33]} {Smed: dd_Smed_v6_9799_0_1, dd_Smed_v6_9799_0_1, [Score=152, Expect=1e-43]} {RNA1509_31540} {RNA1310_128283} {RNA815_9285.1} |
| 7. | MligTC455_46490 | 159 | 3.31 | Mlig455_023332 | Neo: Int S/G2/M Age: Down-Up-Down Regeneration-upregulated R4: 4.570 Regeneration-enriched R4: 4.570 |
CLTA | 0.958 | - | - | - | 0.958 | - | - | Mlig455_023332 {REF} {Length: 1050} {Pfam: Clathrin light chain [PF01086.19, score=73.7]} {Human: ENSG00000122705, CLTA, clathrin light chain A, [Score=63.9, Expect=6e-13]} {Mouse: ENSMUSG00000028478, Clta, clathrin, light polypeptide (Lca), [Score=64.7, Expect=2e-13]} {RNA1509_23129} {RNA1310_38212.1} {RNA815_14039} |
| 8. | MligTC455_26386 | 624 | 13 | Mlig455_020042 | Neo: - Age: logFC(26M/2M)=0.231 Region-enriched R5: 1.382/0.00337 |
0.955 | - | - | - | - | 0.955 | - | Mlig455_020042 {REF} {Length: 4207} {TRANSSPLICED} {Smed: dd_Smed_v6_3465_0_1, dd_Smed_v6_3465_0_1, [RH, Score=112, Expect=6e-26]} {RNA1509_13462, RNA1509_58720} {RNA1310_9257, RNA1509_13462, RNA1509_58720} {RNA1509_13462, RNA1509_58720, RNA815_5213} | |
| 9. | MligTC455_27004 | 325 | 6.76 | Mlig455_030132 | Neo: - Age: - |
MGAT1 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_030132 {REF} {Length: 3167} {Pfam: GNT-I family [PF03071.17, score=239.3]} {Human: ENSG00000131446, MGAT1, mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, [Score=149, Expect=3e-38]} {Mouse: ENSMUSG00000020346, Mgat1, mannoside acetylglucosaminyltransferase 1, [Score=170, Expect=6e-46]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=164, Expect=7e-44]} {Celegans: WBGene00001638, gly-13, Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, [Score=171, Expect=2e-46]} {Smed: dd_Smed_v6_13024_0_1, dd_Smed_v6_13024_0_1, [Score=157, Expect=7e-42]} {RNA1509_17370} {RNA1310_6218.1} {RNA815_2982} |
| 10. | MligTC455_41338 | 68 | 1.41 | Mlig455_007838 | Neo: - Age: Up-Up-Down |
0.955 | - | - | - | - | 0.955 | - | Mlig455_007838 {REF} {Length: 4757} {RNA1310_34392} {RNA815_25763} | |
| 11. | MligTC455_47817 | 284 | 5.91 | Mlig455_046861 | Neo: - Age: - |
SDR42E1 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_046861 {REF} {Length: 2105} {TRANSSPLICED} {Pfam: 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=205.8]; NAD dependent epimerase/dehydratase family [PF01370.23, score=110.8]; RmlD substrate binding domain [PF04321.19, score=65.7]; GDP-mannose 4,6 dehydratase [PF16363.7, score=48.6]; NAD(P)H-binding [PF13460.8, score=39.7]; Male sterility protein [PF07993.14, score=39.5]; Polysaccharide biosynthesis protein [PF02719.17, score=27.0]} {Human: ENSG00000184860, SDR42E1, short chain dehydrogenase/reductase family 42E, member 1, [RH, Score=316, Expect=6e-105]} {Mouse: ENSMUSG00000034308, Sdr42e1, short chain dehydrogenase/reductase family 42E, member 1, [RH, Score=313, Expect=9e-104]} {Dmel: FBgn0036698, CG7724, [Score=58.9, Expect=3e-09]} {Celegans: WBGene00012394, hsd-1, HydroxySteroid Dehydrogenase homolog, [RH, Score=120, Expect=4e-30]} {RNA1509_53922} {RNA1310_22604.1} {RNA815_25343} |
| 12. | MligTC455_36936 | 69 | 1.45 | Mlig455_036570 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_036570 {REF} {Length: 238} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_99471} {RNA815_64986} |
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