Data search


search
Exact
Search

Results for MligTC455_53733

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53733 70 1.46 Mlig455_042224

Neo: -

Age: -

Mlig455_042224 {REF} {Length: 2282} {RNA1509_48475} {RNA1310_18466, RNA1509_48475} {RNA1509_48475, RNA815_22605}

Cumulative graph for MligTC455_53733

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.381 1.71 0.99972 1.00000
RegionR2 0.537 1.71 0.61806 0.96344
RegionR3 0.322 1.71 0.67547 1.00000
RegionR4 1.931 1.71 0.14683 0.39400
RegionR5 0.755 1.71 0.48450 0.84817
RegionR6 1.061 1.71 0.38316 0.96155
RegionR7 -0.022 1.71 0.81362 1.00000
RegionR8 -3.204 1.71 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.367 1.71 0.99991 1.00000
RegenerationR2 0.006 1.71 0.99318 1.00000
RegenerationR3 1.387 1.71 0.13024 0.55332
RegenerationR4 0.229 1.71 0.82424 0.99545
RegenerationR5 0.257 1.71 0.74963 0.97188
RegenerationR6 1.202 1.71 0.14447 0.46575
RegenerationBL 2.15 1.71 0.21239 0.55665
RegenerationTP 2.751 1.71 0.21378 0.65648


Genes with expression patterns similar to MligTC455_53733

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53733 70 1.46 Mlig455_042224

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_042224 {REF} {Length: 2282} {RNA1509_48475} {RNA1310_18466, RNA1509_48475} {RNA1509_48475, RNA815_22605}
2. MligTC455_53734 59 1.23 Mlig455_055711

Neo: -

Age: -

3.564 0.808 - 0.834 0.950 - 0.972 Mlig455_055711 {REF} {Length: 2272} {RNA1509_48475} {RNA1310_18466} {RNA815_22605}
3. MligTC455_25374 428 8.91 Mlig455_036389, Mlig455_036390, Mlig455_036391, Mlig455_054557

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.690

Regeneration-upregulated BL: 5.459

Regeneration-enriched BL: 5.459

2.586 - - 0.803 0.952 - 0.831

Mlig455_036389 {REF} {Length: 860} {NoTransDecoderORF} {RNA1509_40044} {RNA1310_33232} {RNA815_16463}

Mlig455_036390 {REF} {Length: 5024} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}

Mlig455_036391 {REF} {Length: 3445} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}

Mlig455_054557 {REF} {Length: 6330} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}
4. MligTC455_41301 46 0.95 Mlig455_066529

Neo: -

Age: -

1.807 - - - 0.853 0.954 - Mlig455_066529 {REF} {Length: 2912} {NoTransDecoderORF} {RNA1310_114868} {RNA815_46872}
5. MligTC455_24665 140 2.92 Mlig455_005982

Neo: Int S/G2/M

Age: Up-Down-Up

MSTO1 1.666 - - - 0.950 0.716 - Mlig455_005982 {REF} {Length: 3047} {TRANSSPLICED} {Pfam: Misato Segment II tubulin-like domain [PF10644.11, score=73.7]; Tubulin domain [PF14881.8, score=34.9]} {Human: ENSG00000125459, MSTO1, misato 1, mitochondrial distribution and morphology regulator, [Score=108, Expect=1e-24]} {Mouse: ENSMUSG00000068922, Msto1, misato 1, mitochondrial distribution and morphology regulator, [Score=104, Expect=3e-23]} {Dmel: FBgn0020272, mst, misato, [RH, Score=121, Expect=5e-29]} {Smed: dd_Smed_v6_11439_0_1, dd_Smed_v6_11439_0_1, [Score=105, Expect=3e-24]} {RNA1509_26413} {RNA1310_14007.1, RNA1509_26413} {RNA1509_26413, RNA815_5955.1}
6. MligTC455_22318 95 1.97 Mlig455_010919

Neo: -

Age: -

Region-enriched R4: 3.575/0.02891

TSEN2 0.972 - - 0.972 - - - Mlig455_010919 {REF} {Length: 2420} {TRANSSPLICED} {Pfam: tRNA intron endonuclease, catalytic C-terminal domain [PF01974.19, score=53.4]} {Human: ENSG00000154743, TSEN2, tRNA splicing endonuclease subunit 2, [RH, Score=108, Expect=7e-27]} {Mouse: ENSMUSG00000042389, Tsen2, tRNA splicing endonuclease subunit 2, [RH, Score=110, Expect=2e-27]} {Dmel: FBgn0051812, CG31812, [RH, Score=61.2, Expect=5e-11]} {Smed: dd_Smed_v6_13711_0_2, dd_Smed_v6_13711_0_2, [RH, Score=68.9, Expect=8e-14]} {RNA1509_27046} {RNA1310_25073} {RNA815_53112}
7. MligTC455_32672 285 5.95 Mlig455_003822

Neo: -

Age: Down-Up-Down

VTI1A 0.97 - - - 0.970 - - Mlig455_003822 {REF} {Length: 2285} {TRANSSPLICED} {Pfam: Vesicle transport v-SNARE protein N-terminus [PF05008.17, score=59.4]; Snare region anchored in the vesicle membrane C-terminus [PF12352.10, score=54.7]; Sec20 [PF03908.15, score=21.9]} {Human: ENSG00000151532, VTI1A, vesicle transport through interaction with t-SNAREs 1A, [RH, Score=173, Expect=1e-53]} {Mouse: ENSMUSG00000024983, Vti1a, vesicle transport through interaction with t-SNAREs 1A, [RH, Score=175, Expect=3e-54]} {Dmel: FBgn0260862, Vti1a, Vesicle transport through interaction with t-SNAREs 1a, [RH, Score=144, Expect=2e-42]} {Celegans: WBGene00013302, vti-1, VTI (Vesicle Transport through t-SNARE Interaction) homolog, [Score=113, Expect=1e-30]} {Smed: dd_Smed_v6_5094_0_1, dd_Smed_v6_5094_0_1, [RH, Score=155, Expect=3e-47]} {RNA1509_11936} {RNA1310_29540.1, RNA1509_11936} {RNA1509_11936, RNA815_14399}
8. MligTC455_21448 87 1.81 Mlig455_016140

Neo: -

Age: -

Region-enriched R5: 2.917/0.00616

0.963 - - - - 0.963 - Mlig455_016140 {REF} {Length: 1011} {RNA1509_45988} {RNA1310_75270}
9. MligTC455_42441 943 19.65 Mlig455_067966

Neo: Neoblast, stringent

Age: -

BUB1B 0.962 - - - 0.962 - - Mlig455_067966 {REF} {Length: 4977} {Pfam: Mad3/BUB1 homology region 1 [PF08311.14, score=116.8]; Protein kinase domain [PF00069.27, score=31.3]} {Human: ENSG00000156970, BUB1B, BUB1 mitotic checkpoint serine/threonine kinase B, [Score=118, Expect=3e-26]} {Mouse: ENSMUSG00000027379, Bub1, BUB1, mitotic checkpoint serine/threonine kinase, [RH, Score=112, Expect=2e-24]} {Dmel: FBgn0031696, Bub1, Bub1 kinase, [RH, Score=103, Expect=1e-21]} {Celegans: WBGene00000275, bub-1, Mitotic checkpoint serine/threonine-protein kinase bub-1, [RH, Score=71.2, Expect=4e-12]} {Smed: dd_Smed_v6_5366_0_2, dd_Smed_v6_5366_0_2, [Score=50.4, Expect=3e-07]} {RNA1509_9302} {RNA1310_672.1} {RNA815_6919}
10. MligTC455_17497 4275 89.06 Mlig455_005291

Neo: -

Age: -

SLC25A21 0.96 - - - - 0.960 - Mlig455_005291 {REF} {Length: 2346} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=188.8]} {Human: ENSG00000183032, SLC25A21, solute carrier family 25 member 21, [RH, Score=318, Expect=8e-103]} {Mouse: ENSMUSG00000035472, Slc25a21, solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21, [RH, Score=306, Expect=2e-98]} {Dmel: FBgn0040383, CG5254, [RH, Score=292, Expect=3e-93]} {Celegans: WBGene00011226, slc-25A21, SLC (SoLute Carrier) homolog, [RH, Score=256, Expect=8e-80]} {Smed: dd_Smed_v6_1662_0_1, dd_Smed_v6_1662_0_1, [Score=86.7, Expect=2e-18]} {RNA1509_4652} {RNA1310_19382} {RNA815_8848}
11. MligTC455_51455 235 4.9 Mlig455_020896

Neo: -

Age: -

Region-enriched R2: 2.815/0.01995

INTS9 0.958 - - - 0.958 - - Mlig455_020896 {REF} {Length: 2141} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily domain [PF16661.7, score=46.8]; Beta-Casp domain [PF10996.10, score=24.8]} {Human: ENSG00000104299, INTS9, integrator complex subunit 9, [RH, Score=350, Expect=6e-111]} {Mouse: ENSMUSG00000021975, Ints9, integrator complex subunit 9, [RH, Score=341, Expect=2e-107]} {Dmel: FBgn0036570, IntS9, Integrator 9, [RH, Score=308, Expect=2e-95]} {Celegans: WBGene00017608, F19F10.12, [RH, Score=206, Expect=9e-58]} {Smed: dd_Smed_v6_5262_0_1, dd_Smed_v6_5262_0_1, [RH, Score=317, Expect=5e-99]} {RNA1509_13901} {RNA1310_11245.1} {RNA815_21239}
12. MligTC455_16231 113 2.36 Mlig455_011361

Neo: -

Age: logFC(26M/2M)=-1.629

0.956 - - - 0.956 - - Mlig455_011361 {REF} {Length: 717} {TRANSSPLICED} {RNA1509_1634, RNA1509_44264} {RNA1310_62516, RNA1509_1634} {RNA1509_1634, RNA815_22723}
13. MligTC455_53859 28 0.59 Mlig455_056956

Neo: -

Age: -

0.956 - - - 0.956 - - Mlig455_056956 {REF} {Length: 1452} {RNA1310_30892} {RNA815_30662}
14. MligTC455_08633 45 0.93 Mlig455_012424

Neo: -

Age: -

Region-enriched R4: 6.767/0.01731

0.954 - - - 0.954 - - Mlig455_012424 {REF} {Length: 975} {TRANSSPLICED} {RNA1509_43208} {RNA1310_19732} {RNA815_10956}
15. MligTC455_14243 58 1.22 Mlig455_057238

Neo: -

Age: -

ETV7 0.952 - - - 0.952 - - Mlig455_057238 {REF} {Length: 1031} {Pfam: Ets-domain [PF00178.24, score=57.2]} {Human: ENSG00000010030, ETV7, ETS variant 7, [Score=60.5, Expect=1e-10]} {Mouse: ENSMUSG00000024215, Spdef, SAM pointed domain containing ets transcription factor, [Score=57.0, Expect=2e-09]} {Dmel: FBgn0005659, Ets98B, Ets at 98B, [Score=57.8, Expect=9e-10]} {RNA1310_20084.1} {RNA815_23782.1}
16. MligTC455_07345 22 0.46 Mlig455_048875

Neo: -

Age: Down-Up-Up

FLVCR2 0.951 - - - 0.951 - - Mlig455_048875 {REF} {Length: 1646} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=105.9]; Sugar (and other) transporter [PF00083.26, score=29.0]} {Human: ENSG00000119686, FLVCR2, feline leukemia virus subgroup C cellular receptor family member 2, [RH, Score=355, Expect=4e-117]; ENSG00000162769, FLVCR1, feline leukemia virus subgroup C cellular receptor 1, [RH, Score=345, Expect=3e-113]} {Mouse: ENSMUSG00000034258, Flvcr2, feline leukemia virus subgroup C cellular receptor 2, [RH, Score=367, Expect=6e-122]} {Dmel: FBgn0033196, CG1358, [RH, Score=366, Expect=2e-122]} {Celegans: WBGene00015632, C09D4.1, Uncharacterized MFS-type transporter C09D4.1, [RH, Score=376, Expect=2e-126]} {Smed: dd_Smed_v6_7578_0_1, dd_Smed_v6_7578_0_1, [RH, Score=365, Expect=2e-122]} {RNA1310_13875} {RNA815_15816}
17. MligTC455_44742 25 0.51 Mlig455_058971

Neo: -

Age: logFC(26M/2M)=0.846

0.95 - - - 0.950 - - Mlig455_058971 {REF} {Length: 2351} {RNA1310_20861} {RNA815_10446}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA