M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_53859

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_53859 28 0.59 Mlig455_056956

Neo: -

Age: -

 Mlig455_056956 {REF} {Length: 1452} {RNA1310_30892} {RNA815_30662}

Cumulative graph for MligTC455_53859

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.795 1.155 0.99969 1.00000
RegionR2 2.194 1.155 0.17827 0.52796
RegionR3 0.215 1.155 0.72984 1.00000
RegionR4 0.9 1.155 0.48844 0.81581
RegionR5 -1.734 1.155 0.98482 1.00000
RegionR6 0.994 1.155 0.45870 1.00000
RegionR7 1.716 1.155 0.33387 0.96903
RegionR8 -2.491 1.155 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.386 1.155 0.99997 1.00000
RegenerationR2 -1.101 1.155 0.21797 0.66536
RegenerationR3 1.153 1.155 0.34300 0.76691
RegenerationR4 0.699 1.155 0.60761 0.91642
RegenerationR5 1.266 1.155 0.31586 0.74049
RegenerationR6 1.062 1.155 0.32349 0.66965
RegenerationBL -2.496 1.155 1.00000 1.00000
RegenerationTP -2.128 1.155 1.00000 1.00000


Genes with expression patterns similar to MligTC455_53859

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_53859 28 0.59 Mlig455_056956

Neo: -

Age: -

 5 - 1.000 1.000 1.000 1.000 1.000 Mlig455_056956 {REF} {Length: 1452} {RNA1310_30892} {RNA815_30662}
2. MligTC455_37898 52 1.09 Mlig455_047414

Neo: -

Age: -

 1.772 - - - - 0.957 0.815 Mlig455_047414 {REF} {Length: 1354} {RNA1509_56529} {RNA1310_971.2} {RNA815_36603}
3. MligTC455_53858 23 0.48 Mlig455_053248

Neo: -

Age: Down-Up-Up

 1.751 - - - 0.971 0.780 - Mlig455_053248 {REF} {Length: 1450} {RNA1310_30892} {RNA815_30662}
4. MligTC455_50615 204 4.25 Mlig455_056431

Neo: -

Age: -

 GRK3 1.703 - - 0.739 0.964 - - Mlig455_056431 {REF} {Length: 4903} {Pfam: Protein kinase domain [PF00069.27, score=230.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=94.3]; Regulator of G protein signaling domain [PF00615.21, score=52.7]} {Human: ENSG00000100077, GRK3, G protein-coupled receptor kinase 3, [RH, Score=914, Expect=0.0]; ENSG00000173020, GRK2, G protein-coupled receptor kinase 2, [RH, Score=908, Expect=0.0]} {Mouse: ENSMUSG00000024858, Grk2, G protein-coupled receptor kinase 2, [RH, Score=908, Expect=0.0]; ENSMUSG00000042249, Grk3, G protein-coupled receptor kinase 3, [RH, Score=906, Expect=0.0]} {Dmel: FBgn0260798, Gprk1, G protein-coupled receptor kinase 1, [RH, Score=907, Expect=0.0]} {Celegans: WBGene00001709, grk-2, G protein-coupled receptor kinase 2, [RH, Score=887, Expect=0.0]} {Smed: dd_Smed_v6_6480_0_1, dd_Smed_v6_6480_0_1, [RH, Score=1042, Expect=0.0]} {RNA1509_18859, RNA1509_46485} {RNA1310_7105, RNA1509_18859, RNA1509_46485} {RNA1509_18859, RNA1509_46485, RNA815_2886}
5. MligTC455_14954 32 0.66 Mlig455_051468, Mlig455_066698

Neo: -

Age: -

 1.687 - - - 0.959 0.728 -

Mlig455_051468 {REF} {Length: 741} {NoTransDecoderORF}

Mlig455_066698 {REF} {Length: 2055} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=41.2, Expect=1e-05]} {RNA1509_10844} {RNA1310_32662} {RNA815_30370}
6. MligTC455_23672 92 1.91 Mlig455_027992

Neo: Irradiation

Age: Up-Up-Up, logFC(26M/2M)=0.571

Region-enriched R5: 3.231/0.00880

 NPHS1 1 - - 1.000 - - - Mlig455_027992 {REF} {Length: 2183} {Pfam: Lipopolysaccharide assembly protein A domain [PF06305.13, score=22.0]} {Human: ENSG00000161270, NPHS1, NPHS1, nephrin, [Score=68.9, Expect=7e-12]} {Mouse: ENSMUSG00000006649, Nphs1, nephrosis 1, nephrin, [Score=65.5, Expect=5e-11]} {Dmel: FBgn0024189, sns, sticks and stones, [Score=53.1, Expect=4e-07]} {Smed: dd_Smed_v6_13903_0_1, dd_Smed_v6_13903_0_1, [Score=77.4, Expect=4e-15]} {RNA1509_21115} {RNA1310_2704} {RNA815_9534.1}
7. MligTC455_32663 99 2.06 Mlig455_067221

Neo: Int S/G2/M

Age: Up-Down-Up

 0.999 - - 0.999 - - - Mlig455_067221 {REF} {Length: 2415} {Pfam: PH domain [PF00169.31, score=25.8]} {RNA1509_43721} {RNA1310_326} {RNA815_8437.1}
8. MligTC455_41269 116 2.42 Mlig455_005909, Mlig455_005922

Neo: -

Age: -

 0.996 - - 0.996 - - -

Mlig455_005909 {REF} {Length: 1188} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=56.7]} {Celegans: WBGene00002023, hsp-25, Heat Shock Protein, [Score=52.8, Expect=7e-09]} {Smed: dd_Smed_v6_1039_0_1, dd_Smed_v6_1039_0_1, [Score=49.7, Expect=6e-07]} {RNA1310_42807} {RNA815_40719}

Mlig455_005922 {REF} {Length: 1188} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=56.8]} {Celegans: WBGene00002023, hsp-25, Heat Shock Protein, [Score=52.8, Expect=7e-09]} {RNA1310_42807} {RNA815_40719}
9. MligTC455_18973 78 1.63 Mlig455_019347

Neo: -

Age: Up-Down-Down

Region-enriched R4: 3.600/0.01920

 0.981 - - - 0.981 - - Mlig455_019347 {REF} {Length: 1563} {RNA1509_35598, RNA1509_58186} {RNA1310_23207.2, RNA1509_58186} {RNA1509_58186, RNA815_10106}
10. MligTC455_07943 18 0.37 Mlig455_064043

Neo: -

Age: -

 0.979 - - - 0.979 - - Mlig455_064043 {REF} {Length: 381} {NoTransDecoderORF}
11. MligTC455_53734 59 1.23 Mlig455_055711

Neo: -

Age: -

 0.976 - - - 0.976 - - Mlig455_055711 {REF} {Length: 2272} {RNA1509_48475} {RNA1310_18466} {RNA815_22605}
12. MligTC455_28622 626 13.05 Mlig455_028335, Mlig455_066149

Neo: -

Age: Down-Up-Down

 ANO7 0.972 - - - - 0.972 -

Mlig455_028335 {REF} {Length: 5358} {TRANSSPLICED} {Pfam: Calcium-activated chloride channel [PF04547.14, score=416.5]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=98.7]} {Human: ENSG00000146205, ANO7, anoctamin 7, [Score=303, Expect=5e-88]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [Score=303, Expect=6e-89]} {Dmel: FBgn0036235, CG6938, [Score=279, Expect=2e-78]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [RH, Score=432, Expect=1e-137]} {Smed: dd_Smed_v6_4761_0_1, dd_Smed_v6_4761_0_1, [Score=310, Expect=7e-92]} {RNA1509_16739} {RNA1310_3159} {RNA815_709.1}

Mlig455_066149 {REF} {Length: 4069} {TRANSSPLICED} {Pfam: Calcium-activated chloride channel [PF04547.14, score=416.3]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=105.2]} {Human: ENSG00000146205, ANO7, anoctamin 7, [Score=301, Expect=6e-87]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [Score=300, Expect=2e-87]} {Dmel: FBgn0036235, CG6938, [Score=280, Expect=3e-78]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [RH, Score=440, Expect=5e-140]} {Smed: dd_Smed_v6_4761_0_1, dd_Smed_v6_4761_0_1, [Score=311, Expect=4e-92]} {RNA1509_16739} {RNA1310_3045} {RNA815_709.1}
13. MligTC455_02375 31 0.64 Mlig455_023809

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_023809 {REF} {Length: 555} {Pfam: RNase H [PF00075.26, score=28.7]} {RNA1310_49685}
14. MligTC455_10522 86 1.8 Mlig455_047713

Neo: -

Age: -

 0.968 - - - 0.968 - - Mlig455_047713 {REF} {Length: 2067} {RNA1509_36146} {RNA1310_33642} {RNA815_14202}
15. MligTC455_35641 204 4.26 Mlig455_063893

Neo: -

Age: -

Region-enriched R7: 2.222/0.00831

 WSCD2 0.967 - - - 0.967 - - Mlig455_063893 {REF} {Length: 4676} {Pfam: WSC domain [PF01822.21, score=494.1]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=58.9, Expect=4e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=60.5, Expect=1e-08]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=58.9, Expect=3e-08]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=57.4, Expect=5e-08]} {RNA1509_10855, RNA1509_32133} {RNA1310_564, RNA1509_32133} {RNA1509_32133, RNA815_597.1}
16. MligTC455_36024 28 0.59 Mlig455_055284, Mlig455_055330

Neo: -

Age: -

 0.967 - - - - 0.967 -

Mlig455_055284 {REF} {Length: 1451} {RNA1509_29082} {RNA1310_61099} {RNA815_29618}

Mlig455_055330 {REF} {Length: 1771} {RNA1509_29082} {RNA1310_61099} {RNA815_29618}
17. MligTC455_43600 420 8.74 Mlig455_038777

Neo: Int S/G2/M

Age: -

 XPNPEP3 0.964 - - - 0.964 - - Mlig455_038777 {REF} {Length: 2274} {TRANSSPLICED} {Pfam: Metallopeptidase family M24 [PF00557.26, score=153.6]; Aminopeptidase P, N-terminal domain [PF05195.18, score=53.9]} {Human: ENSG00000196236, XPNPEP3, X-prolyl aminopeptidase 3, [RH, Score=233, Expect=1e-69]} {Mouse: ENSMUSG00000022401, Xpnpep3, X-prolyl aminopeptidase 3, mitochondrial, [RH, Score=238, Expect=8e-72]} {Dmel: FBgn0031093, CG9581, [RH, Score=241, Expect=1e-72]} {Celegans: WBGene00020088, R119.2, [RH, Score=225, Expect=6e-68]} {Smed: dd_Smed_v6_6038_0_1, dd_Smed_v6_6038_0_1, [RH, Score=265, Expect=3e-83]} {RNA1509_30315, RNA1509_59429} {RNA1310_10748, RNA1509_59429} {RNA1509_59429, RNA815_1464.1}
18. MligTC455_53645 230 4.79 Mlig455_056853

Neo: Irradiation

Age: Up-Down-Up

Region-enriched R5: 2.305/0.00036

Regeneration-upregulated R4: 3.325

Regeneration-enriched R4: 3.325

 MYO9A 0.961 - - - 0.961 - - Mlig455_056853 {REF} {Length: 3207} {Pfam: RhoGAP domain [PF00620.29, score=92.6]} {Human: ENSG00000066933, MYO9A, myosin IXA, [Score=73.9, Expect=8e-13]} {Mouse: ENSMUSG00000039585, Myo9a, myosin IXa, [Score=72.8, Expect=2e-12]} {Dmel: FBgn0036257, RhoGAP68F, Rho GTPase activating protein at 68F, [Score=67.8, Expect=2e-11]} {Celegans: WBGene00001559, gei-1, GEX Interacting protein, [Score=73.2, Expect=6e-13]} {Smed: dd_Smed_v6_6129_0_1, dd_Smed_v6_6129_0_1, [Score=62.8, Expect=6e-10]} {RNA1310_25774} {RNA815_32981}
19. MligTC455_12103 45 0.93 Mlig455_058005, Mlig455_058199

Neo: -

Age: -

 PTH1R 0.96 - - 0.960 - - -

Mlig455_058005 {REF} {Length: 2247} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=180.8]; Hormone receptor domain [PF02793.24, score=71.6]} {Human: ENSG00000160801, PTH1R, parathyroid hormone 1 receptor, [Score=218, Expect=5e-62]} {Mouse: ENSMUSG00000032492, Pth1r, parathyroid hormone 1 receptor, [Score=218, Expect=2e-62]} {Dmel: FBgn0033744, Dh44-R2, Diuretic hormone 44 receptor 2, [RH, Score=136, Expect=3e-34]} {Celegans: WBGene00015735, pdfr-1, Calcitonin receptor-like protein 1, [Score=108, Expect=9e-25]} {Smed: dd_Smed_v6_20871_0_1, dd_Smed_v6_20871_0_1, [Score=233, Expect=2e-69]} {RNA1310_107845}

Mlig455_058199 {REF} {Length: 2151} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=133.8]; Hormone receptor domain [PF02793.24, score=72.0]} {Human: ENSG00000160801, PTH1R, parathyroid hormone 1 receptor, [Score=180, Expect=1e-48]} {Mouse: ENSMUSG00000032492, Pth1r, parathyroid hormone 1 receptor, [Score=182, Expect=2e-49]} {Dmel: FBgn0033744, Dh44-R2, Diuretic hormone 44 receptor 2, [Score=112, Expect=5e-26]} {Celegans: WBGene00015735, pdfr-1, Calcitonin receptor-like protein 1, [Score=90.1, Expect=1e-18]} {Smed: dd_Smed_v6_20871_0_1, dd_Smed_v6_20871_0_1, [Score=206, Expect=8e-60]} {RNA1310_107845}
20. MligTC455_18373 45 0.93 Mlig455_046441

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_046441 {REF} {Length: 3745} {Pfam: C2H2-type zinc finger [PF13894.8, score=47.0]; Zinc finger, C2H2 type [PF00096.28, score=32.6]; C2H2 type zinc-finger (1 copy) [PF16293.7, score=22.6]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=21.7]} {RNA1509_21763} {RNA1310_9886.1} {RNA815_7892}
21. MligTC455_19310 70 1.45 Mlig455_003091

Neo: -

Age: -

Region-enriched R2: 3.267/0.02767

 SPRED2 0.96 - 0.960 - - - - Mlig455_003091 {REF} {Length: 1347} {Pfam: Sprouty protein (Spry) [PF05210.15, score=59.9]} {Human: ENSG00000198369, SPRED2, sprouty related EVH1 domain containing 2, [RH, Score=70.1, Expect=8e-13]} {Mouse: ENSMUSG00000045671, Spred2, sprouty-related, EVH1 domain containing 2, [RH, Score=70.1, Expect=5e-13]} {Dmel: FBgn0020767, Spred, Sprouty-related protein with EVH-1 domain, [Score=54.3, Expect=6e-08]} {Smed: dd_Smed_v6_14816_0_1, dd_Smed_v6_14816_0_1, [RH, Score=59.3, Expect=6e-11]} {RNA1310_54905} {RNA815_26736}
22. MligTC455_14243 58 1.22 Mlig455_057238

Neo: -

Age: -

 ETV7 0.959 - - - 0.959 - - Mlig455_057238 {REF} {Length: 1031} {Pfam: Ets-domain [PF00178.24, score=57.2]} {Human: ENSG00000010030, ETV7, ETS variant 7, [Score=60.5, Expect=1e-10]} {Mouse: ENSMUSG00000024215, Spdef, SAM pointed domain containing ets transcription factor, [Score=57.0, Expect=2e-09]} {Dmel: FBgn0005659, Ets98B, Ets at 98B, [Score=57.8, Expect=9e-10]} {RNA1310_20084.1} {RNA815_23782.1}
23. MligTC455_18317 200 4.17 Mlig455_012193

Neo: -

Age: -

 TUBGCP6 0.959 - - - 0.959 - - Mlig455_012193 {REF} {Length: 6073} {TRANSSPLICED} {Pfam: Gamma tubulin complex component C-terminal [PF04130.15, score=140.2]; Gamma tubulin complex component N-terminal [PF17681.3, score=39.9]} {Human: ENSG00000128159, TUBGCP6, tubulin gamma complex associated protein 6, [RH, Score=146, Expect=2e-34]} {Mouse: ENSMUSG00000051786, Tubgcp6, tubulin, gamma complex associated protein 6, [RH, Score=144, Expect=6e-34]} {Smed: dd_Smed_v6_10229_0_1, dd_Smed_v6_10229_0_1, [Score=65.9, Expect=2e-10]} {RNA1509_23983} {RNA1310_6044.1} {RNA815_3163}
24. MligTC455_31199 97 2.02 Mlig455_052593

Neo: -

Age: Up-Down-Up

 TRPA1 0.959 - - - - 0.959 - Mlig455_052593 {REF} {Length: 5026} {tRNA: Undet(NNN),pseudo, score=20.2} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=229.9]; Ankyrin repeats (many copies) [PF13637.8, score=125.3]; Ankyrin repeats (many copies) [PF13857.8, score=124.0]; Ankyrin repeat [PF13606.8, score=103.8]; Ankyrin repeat [PF00023.32, score=95.8]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=188, Expect=5e-53]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=186, Expect=3e-52]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=247, Expect=7e-74]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=103, Expect=4e-24]} {Smed: dd_Smed_v6_14207_0_1, dd_Smed_v6_14207_0_1, [Score=279, Expect=1e-85]} {RNA1509_23399} {RNA1310_1132.2} {RNA815_2938.1}
25. MligTC455_08966 67 1.4 Mlig455_050187

Neo: -

Age: -

 0.958 - - - 0.958 - - Mlig455_050187 {REF} {Length: 682} {NoTransDecoderORF} {RNA1310_138902}
26. MligTC455_19218 249 5.18 Mlig455_034022

Neo: -

Age: -

 0.958 - - - 0.958 - - Mlig455_034022 {REF} {Length: 2371} {Pfam: EF-hand domain pair [PF13499.8, score=79.6]; EF-hand domain [PF13405.8, score=63.7]; EF-hand domain pair [PF13833.8, score=62.4]; EF hand [PF00036.34, score=57.3]; EF hand [PF13202.8, score=40.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=30.2]} {Dmel: FBgn0026144, CBP, sarcoplasmic calcium-binding protein, [Score=58.9, Expect=1e-09]} {Smed: dd_Smed_v6_1010_0_1, dd_Smed_v6_1010_0_1, [RH, Score=412, Expect=2e-143]} {RNA1509_14509} {RNA1310_13479} {RNA815_4591.1}
27. MligTC455_25374 428 8.91 Mlig455_036389, Mlig455_036390, Mlig455_036391, Mlig455_054557

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.690

Regeneration-upregulated BL: 5.459

Regeneration-enriched BL: 5.459

 0.958 - - - 0.958 - -

Mlig455_036389 {REF} {Length: 860} {NoTransDecoderORF} {RNA1509_40044} {RNA1310_33232} {RNA815_16463}

Mlig455_036390 {REF} {Length: 5024} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}

Mlig455_036391 {REF} {Length: 3445} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}

Mlig455_054557 {REF} {Length: 6330} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}
28. MligTC455_34462 54 1.13 Mlig455_033965, Mlig455_058027

Neo: Neoblast

Age: -

 CELF3 0.958 - - - 0.958 - -

Mlig455_033965 {REF} {Length: 634} {Celegans: WBGene00021449, mltn-7, MLt-TeN (Mlt-10) related, [Score=49.7, Expect=5e-07]}

Mlig455_058027 {REF} {Length: 2471} {Human: ENSG00000159409, CELF3, CUGBP Elav-like family member 3, [Score=56.6, Expect=9e-09]; ENSG00000048740, CELF2, CUGBP Elav-like family member 2, [Score=56.2, Expect=1e-08]; ENSG00000101489, CELF4, CUGBP Elav-like family member 4, [Score=55.5, Expect=4e-09]; ENSG00000161082, CELF5, CUGBP Elav-like family member 5, [Score=54.7, Expect=5e-08]; ENSG00000273025, AC009690.3, novel transcript, [Score=54.7, Expect=5e-08]; ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [Score=54.7, Expect=4e-08]; ENSG00000149187, CELF1, CUGBP Elav-like family member 1, [Score=54.3, Expect=6e-08]} {Mouse: ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [Score=57.0, Expect=5e-09]; ENSMUSG00000002107, Celf2, CUGBP, Elav-like family member 2, [Score=56.2, Expect=1e-08]; ENSMUSG00000024268, Celf4, CUGBP, Elav-like family member 4, [Score=55.1, Expect=2e-08]; ENSMUSG00000032297, Celf6, CUGBP, Elav-like family member 6, [Score=54.7, Expect=2e-08]; ENSMUSG00000005506, Celf1, CUGBP, Elav-like family member 1, [Score=54.3, Expect=4e-08]; ENSMUSG00000110883, Celf1, CUGBP, Elav-like family member 1, [Score=54.3, Expect=4e-08]} {Dmel: FBgn0264001, bru3, bruno 3, [Score=57.0, Expect=3e-09]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [Score=58.2, Expect=1e-09]} {Smed: dd_Smed_v6_11349_0_1, dd_Smed_v6_11349_0_1, [Score=55.5, Expect=7e-09]} {RNA1509_40041} {RNA1310_25362.1, RNA1509_40041} {RNA1509_40041, RNA815_13994}
29. MligTC455_36685 249 5.19 Mlig455_011304, Mlig455_022484, Mlig455_038580, Mlig455_053177, Mlig455_053195, Mlig455_054147, Mlig455_057048

Neo: -

Age: -

 0.958 - - - 0.958 - -

Mlig455_011304 {REF} {Length: 2066} {RNA1310_36097} {RNA815_32539}

Mlig455_022484 {REF} {Length: 1980} {RNA1310_36097} {RNA815_32539}

Mlig455_038580 {REF} {Length: 1727} {RNA1310_36097} {RNA815_32539}

Mlig455_053177 {REF} {Length: 1901} {RNA1310_36097} {RNA815_32539}

Mlig455_053195 {REF} {Length: 1903} {RNA1310_36097} {RNA815_32539}

Mlig455_054147 {REF} {Length: 709} {RNA1310_36097} {RNA815_32539}

Mlig455_057048 {REF} {Length: 2030} {RNA1310_36097} {RNA815_32539}
30. MligTC455_23488 260 5.42 Mlig455_006084, Mlig455_006111

Neo: -

Age: -

 0.957 - - - - 0.957 -

Mlig455_006084 {REF} {Length: 2438} {TRANSSPLICED} {RNA1509_55206} {RNA1310_12495} {RNA815_795.1}

Mlig455_006111 {REF} {Length: 2449} {TRANSSPLICED} {RNA1509_55206} {RNA1310_12495} {RNA815_795.1}
31. MligTC455_48478 222 4.63 Mlig455_035468

Neo: -

Age: Down-Up-Down

 SYNPO2L 0.957 - - - - - 0.957 Mlig455_035468 {REF} {Length: 4132} {Pfam: PDZ domain [PF00595.26, score=34.4]; PDZ domain [PF17820.3, score=31.7]} {Human: ENSG00000166317, SYNPO2L, synaptopodin 2 like, [Score=62.8, Expect=5e-10]} {Mouse: ENSMUSG00000039376, Synpo2l, synaptopodin 2-like, [RH, Score=67.0, Expect=2e-11]} {Dmel: FBgn0039897, CG1674, [RH, Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_8867_0_1, dd_Smed_v6_8867_0_1, [RH, Score=130, Expect=2e-33]} {RNA1509_27975, RNA1509_48856} {RNA1310_2698, RNA1509_27975, RNA1509_48856} {RNA1509_27975, RNA1509_48856, RNA815_2100}
32. MligTC455_06004 90 1.87 Mlig455_001723, Mlig455_001735, Mlig455_063322, Mlig455_063326

Neo: -

Age: Up-Up-Down

Region-enriched R4: 4.350/0.02066

 SLC22A4, SLC22A5, SLC22A7 0.956 - - - - - 0.956

Mlig455_001723 {REF} {Length: 2386} {TRANSSPLICED} {Pfam: Sugar (and other) transporter [PF00083.26, score=61.3]; Major Facilitator Superfamily [PF07690.18, score=61.2]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=177, Expect=2e-48]} {Mouse: ENSMUSG00000018900, Slc22a5, solute carrier family 22 (organic cation transporter), member 5, [Score=191, Expect=1e-53]; ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=185, Expect=3e-51]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=146, Expect=2e-37]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=134, Expect=3e-33]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=149, Expect=1e-38]} {RNA1509_45235} {RNA1310_37752} {RNA815_8805}

Mlig455_001735 {REF} {Length: 1708} {TRANSSPLICED} {Pfam: Sugar (and other) transporter [PF00083.26, score=32.4]; Major Facilitator Superfamily [PF07690.18, score=29.2]} {Human: ENSG00000137204, SLC22A7, solute carrier family 22 member 7, [Score=120, Expect=2e-30]; ENSG00000197208, SLC22A4, solute carrier family 22 member 4, [Score=114, Expect=2e-28]} {Mouse: ENSMUSG00000018900, Slc22a5, solute carrier family 22 (organic cation transporter), member 5, [Score=119, Expect=4e-30]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=95.5, Expect=5e-22]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=83.2, Expect=7e-18]} {Smed: dd_Smed_v6_10826_0_1, dd_Smed_v6_10826_0_1, [RH, Score=99.4, Expect=1e-24]} {RNA1509_45235} {RNA1310_37752} {RNA815_8805}

Mlig455_063322 {REF} {Length: 1717} {Pfam: Sugar (and other) transporter [PF00083.26, score=63.2]; Major Facilitator Superfamily [PF07690.18, score=58.8]} {Human: ENSG00000197208, SLC22A4, solute carrier family 22 member 4, [Score=159, Expect=5e-42]; ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=158, Expect=1e-41]} {Mouse: ENSMUSG00000018900, Slc22a5, solute carrier family 22 (organic cation transporter), member 5, [Score=175, Expect=7e-48]; ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=170, Expect=4e-46]; ENSMUSG00000020334, Slc22a4, solute carrier family 22 (organic cation transporter), member 4, [Score=167, Expect=4e-45]} {Dmel: FBgn0038404, CG8925, [Score=122, Expect=2e-29]} {Celegans: WBGene00003837, oat-1, Multispecific organic anion transporter; Organic Anion Transporter, [Score=119, Expect=9e-29]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=145, Expect=1e-37]} {RNA1509_45235} {RNA1310_37752} {RNA815_8805}

Mlig455_063326 {REF} {Length: 2384} {TRANSSPLICED} {Pfam: Sugar (and other) transporter [PF00083.26, score=61.3]; Major Facilitator Superfamily [PF07690.18, score=59.5]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=197, Expect=2e-55]} {Mouse: ENSMUSG00000018900, Slc22a5, solute carrier family 22 (organic cation transporter), member 5, [Score=213, Expect=3e-61]; ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=206, Expect=6e-59]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=161, Expect=7e-43]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=148, Expect=4e-38]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=172, Expect=8e-47]} {RNA1509_45235} {RNA1310_37752} {RNA815_8805}
33. MligTC455_39769 21 0.43 Mlig455_027600

Neo: -

Age: -

 QRFPR 0.956 - - - - 0.956 - Mlig455_027600 {REF} {Length: 2346} {tRNA: Val(AAC),pseudo, score=31.9} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=49.4]; Sodium:dicarboxylate symporter family [PF00375.20, score=19.3]} {Human: ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=58.9, Expect=3e-09]; ENSG00000082556, OPRK1, opioid receptor kappa 1, [Score=57.8, Expect=6e-09]} {Mouse: ENSMUSG00000025905, Oprk1, opioid receptor, kappa 1, [Score=68.2, Expect=2e-12]} {Dmel: FBgn0036789, AstC-R2, Allatostatin C receptor 2, [Score=66.6, Expect=5e-12]} {Celegans: WBGene00020086, npr-24, NeuroPeptide Receptor family, [Score=61.6, Expect=1e-10]} {Smed: dd_Smed_v6_17008_0_1, dd_Smed_v6_17008_0_1, [Score=85.1, Expect=1e-18]} {RNA1509_45595} {RNA1310_117665} {RNA815_31014}
34. MligTC455_53733 70 1.46 Mlig455_042224

Neo: -

Age: -

 0.956 - - - 0.956 - - Mlig455_042224 {REF} {Length: 2282} {RNA1509_48475} {RNA1310_18466, RNA1509_48475} {RNA1509_48475, RNA815_22605}
35. MligTC455_21023 30 0.62 Mlig455_009468, Mlig455_035246

Neo: -

Age: -

 0.955 - - - - 0.955 -

Mlig455_009468 {REF} {Length: 834} {TRANSSPLICED} {RNA1509_59965} {RNA1310_53720} {RNA815_38962.1}

Mlig455_035246 {REF} {Length: 864} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59965} {RNA1310_40914} {RNA815_38962.2}
36. MligTC455_24897 1565 32.6 Mlig455_048310, Mlig455_048334, Mlig455_048354

Neo: -

Age: logFC(26M/2M)=-0.953

Region-enriched R6: 7.021/0.00000

 SLC6A5 0.955 - - - 0.955 - -

Mlig455_048310 {REF} {Length: 2569} {TRANSSPLICED} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=599.3]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=531, Expect=3e-179]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=529, Expect=1e-178]} {Dmel: FBgn0034911, CG5549, [RH, Score=523, Expect=5e-172]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=408, Expect=4e-134]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=556, Expect=0.0]} {RNA1509_14130} {RNA1310_6202.1, RNA1509_14130} {RNA1509_14130, RNA815_3548}

Mlig455_048334 {REF} {Length: 2413} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=594.3]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=528, Expect=4e-178]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=527, Expect=9e-178]} {Dmel: FBgn0034911, CG5549, [RH, Score=518, Expect=9e-170]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=407, Expect=8e-134]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=550, Expect=0.0]} {RNA1509_14130} {RNA1310_6202.1} {RNA815_3548}

Mlig455_048354 {REF} {Length: 2413} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=598.4]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=530, Expect=7e-179]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=528, Expect=2e-178]} {Dmel: FBgn0034911, CG5549, [RH, Score=522, Expect=2e-171]} {Celegans: WBGene00004910, snf-11, Transporter, [Score=409, Expect=8e-135]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=556, Expect=0.0]} {RNA1509_14130, RNA1509_31856} {RNA1310_6202.1, RNA1509_31856} {RNA1509_31856, RNA815_3548}
37. MligTC455_42159 22 0.47 Mlig455_053152

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_053152 {REF} {Length: 451} {NoTransDecoderORF} {RNA1509_6161} {RNA1310_119994} {RNA815_33418}
38. MligTC455_27775 97 2.02 Mlig455_018548

Neo: Irradiation

Age: -

 ATAD5 0.954 - - - - 0.954 - Mlig455_018548 {REF} {Length: 4116} {TRANSSPLICED} {Human: ENSG00000176208, ATAD5, ATPase family, AAA domain containing 5, [RH, Score=77.4, Expect=1e-13]} {Mouse: ENSMUSG00000017550, Atad5, ATPase family, AAA domain containing 5, [RH, Score=76.3, Expect=2e-13]} {Dmel: FBgn0036574, elg1, enhanced level of genomic instability 1, [Score=51.6, Expect=4e-06]} {Celegans: WBGene00013156, Y53F4B.9, [Score=51.2, Expect=4e-06]} {RNA1509_17564} {RNA1310_10601.1, RNA1509_17564} {RNA1509_17564, RNA815_24292}
39. MligTC455_28678 1649 34.35 Mlig455_001112, Mlig455_001114, Mlig455_042059

Neo: -

Age: -

Region-specific R6: 5.445

Region-enriched R6: 5.816/0.00000

 SLC5A8 0.953 - - - 0.953 - -

Mlig455_001112 {REF} {Length: 4229} {TRANSSPLICED} {Pfam: Sodium:solute symporter family [PF00474.19, score=115.2]} {Human: ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=369, Expect=9e-119]; ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=369, Expect=9e-119]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=361, Expect=8e-116]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=345, Expect=2e-109]} {Dmel: FBgn0250757, CG42235, [RH, Score=309, Expect=3e-95]} {Celegans: WBGene00014092, ZK822.5, [Score=213, Expect=2e-60]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [Score=318, Expect=5e-100]} {RNA1509_12386} {RNA1310_9016} {RNA815_2751}

Mlig455_001114 {REF} {Length: 2478} {Pfam: Sodium:solute symporter family [PF00474.19, score=102.4]} {Human: ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=345, Expect=6e-110]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=345, Expect=6e-110]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=337, Expect=1e-106]; ENSMUSG00000006641, Slc5a6, solute carrier family 5 (sodium-dependent vitamin transporter), member 6, [Score=336, Expect=3e-106]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=323, Expect=2e-101]} {Dmel: FBgn0250757, CG42235, [Score=292, Expect=6e-89]} {Celegans: WBGene00014092, ZK822.5, [Score=200, Expect=5e-56]} {Smed: dd_Smed_v6_14173_0_1, dd_Smed_v6_14173_0_1, [Score=308, Expect=3e-96]} {RNA1509_12386} {RNA1310_8136.1} {RNA815_2751}

Mlig455_042059 {REF} {Length: 885} {Human: ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=90.5, Expect=6e-20]; ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=90.5, Expect=6e-20]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=94.0, Expect=2e-21]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=90.9, Expect=3e-20]} {Dmel: FBgn0250757, CG42235, [Score=72.4, Expect=4e-14]} {Celegans: WBGene00018716, F52H2.4, [Score=46.6, Expect=1e-05]} {RNA1509_43797} {RNA1310_9016} {RNA815_26977}
40. MligTC455_47004 371 7.72 Mlig455_007268

Neo: -

Age: Down-Up-Up

 OGFOD1 0.953 - - - 0.953 - - Mlig455_007268 {REF} {Length: 1419} {Pfam: Oxoglutarate and iron-dependent oxygenase degradation C-term [PF10637.11, score=46.5]} {Human: ENSG00000087263, OGFOD1, 2-oxoglutarate and iron dependent oxygenase domain containing 1, [Score=86.3, Expect=5e-19]} {Mouse: ENSMUSG00000033009, Ogfod1, 2-oxoglutarate and iron-dependent oxygenase domain containing 1, [Score=85.5, Expect=6e-19]} {RNA1509_32662, RNA1509_50798} {RNA1310_19206, RNA1509_32662, RNA1509_50798} {RNA1509_32662, RNA1509_50798, RNA815_18604}
41. MligTC455_51601 185 3.85 Mlig455_025475

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_025475 {REF} {Length: 3495} {TRANSSPLICED} {RNA1509_42536} {RNA1310_9013} {RNA815_28709}
42. MligTC455_06614 35 0.72 Mlig455_052447

Neo: -

Age: -

 0.952 - - - 0.952 - - Mlig455_052447 {REF} {Length: 869} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_20081} {RNA1310_65601} {RNA815_26807}
43. MligTC455_07346 16 0.34 Mlig455_048886

Neo: -

Age: -

 FLVCR2 0.952 - - - 0.952 - - Mlig455_048886 {REF} {Length: 1646} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=106.3]; Sugar (and other) transporter [PF00083.26, score=28.3]} {Human: ENSG00000119686, FLVCR2, feline leukemia virus subgroup C cellular receptor family member 2, [RH, Score=354, Expect=6e-117]; ENSG00000162769, FLVCR1, feline leukemia virus subgroup C cellular receptor 1, [RH, Score=345, Expect=4e-113]} {Mouse: ENSMUSG00000034258, Flvcr2, feline leukemia virus subgroup C cellular receptor 2, [RH, Score=367, Expect=1e-121]} {Dmel: FBgn0033196, CG1358, [RH, Score=367, Expect=9e-123]} {Celegans: WBGene00015632, C09D4.1, Uncharacterized MFS-type transporter C09D4.1, [RH, Score=377, Expect=1e-126]} {Smed: dd_Smed_v6_7578_0_1, dd_Smed_v6_7578_0_1, [RH, Score=365, Expect=1e-122]} {RNA1310_13875} {RNA815_15816}
44. MligTC455_50645 44 0.91 Mlig455_036533

Neo: -

Age: -

 SCYL1 0.952 - - - 0.952 - - Mlig455_036533 {REF} {Length: 4260} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=41.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.1]; HEAT repeats [PF13646.8, score=32.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=25.7]; Protein kinase domain [PF00069.27, score=23.0]} {Human: ENSG00000142186, SCYL1, SCY1 like pseudokinase 1, [RH, Score=447, Expect=7e-145]} {Mouse: ENSMUSG00000024941, Scyl1, SCY1-like 1 (S. cerevisiae), [RH, Score=441, Expect=6e-143]} {Dmel: FBgn0260990, yata, [RH, Score=516, Expect=4e-171]} {Celegans: WBGene00012337, W07G4.3, [RH, Score=404, Expect=6e-129]} {Smed: dd_Smed_v6_3470_0_1, dd_Smed_v6_3470_0_1, [RH, Score=460, Expect=5e-152]} {RNA1509_21531, RNA1509_23084, RNA1509_58473} {RNA1310_4140, RNA1509_21531, RNA1509_23084, RNA1509_58473} {RNA1509_21531, RNA1509_23084, RNA1509_58473, RNA815_4060}
45. MligTC455_35094 87 1.81 Mlig455_005764, Mlig455_005781, Mlig455_005808

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.906

 CNNM2 0.95 - - - 0.950 - -

Mlig455_005764 {REF} {Length: 3715} {Pfam: Cyclin M transmembrane N-terminal domain [PF01595.22, score=113.5]; CBS domain [PF00571.30, score=21.2]} {Human: ENSG00000148842, CNNM2, cyclin and CBS domain divalent metal cation transport mediator 2, [Score=189, Expect=1e-51]} {Mouse: ENSMUSG00000064105, Cnnm2, cyclin M2, [Score=188, Expect=1e-51]} {Dmel: FBgn0262124, uex, unextended, [Score=172, Expect=2e-46]} {Celegans: WBGene00016879, cnnm-1, Metal transporter cnnm-1, [Score=147, Expect=6e-38]} {Smed: dd_Smed_v6_6666_0_1, dd_Smed_v6_6666_0_1, [Score=221, Expect=1e-67]} {RNA1509_31868} {RNA1310_40700} {RNA815_5292}

Mlig455_005781 {REF} {Length: 3716} {Pfam: Cyclin M transmembrane N-terminal domain [PF01595.22, score=113.5]; CBS domain [PF00571.30, score=21.2]} {Human: ENSG00000148842, CNNM2, cyclin and CBS domain divalent metal cation transport mediator 2, [Score=189, Expect=1e-51]} {Mouse: ENSMUSG00000064105, Cnnm2, cyclin M2, [Score=188, Expect=1e-51]} {Dmel: FBgn0262124, uex, unextended, [Score=172, Expect=2e-46]} {Celegans: WBGene00016879, cnnm-1, Metal transporter cnnm-1, [Score=147, Expect=6e-38]} {Smed: dd_Smed_v6_6666_0_1, dd_Smed_v6_6666_0_1, [Score=221, Expect=1e-67]} {RNA1509_31868} {RNA1310_40700} {RNA815_5292}

Mlig455_005808 {REF} {Length: 2715} {Pfam: Cyclin M transmembrane N-terminal domain [PF01595.22, score=113.9]; CBS domain [PF00571.30, score=21.8]} {Human: ENSG00000148842, CNNM2, cyclin and CBS domain divalent metal cation transport mediator 2, [Score=189, Expect=1e-52]} {Mouse: ENSMUSG00000064105, Cnnm2, cyclin M2, [Score=189, Expect=1e-52]} {Dmel: FBgn0262124, uex, unextended, [Score=171, Expect=1e-46]} {Celegans: WBGene00016879, cnnm-1, Metal transporter cnnm-1, [Score=146, Expect=4e-38]} {Smed: dd_Smed_v6_6666_0_1, dd_Smed_v6_6666_0_1, [Score=222, Expect=1e-68]} {RNA1509_31868} {RNA1310_40700} {RNA815_5292}
46. MligTC455_49810 21 0.44 Mlig455_041830

Neo: -

Age: -

 GFOD2 0.95 - - 0.950 - - - Mlig455_041830 {REF} {Length: 1798} {TRANSSPLICED} {Human: ENSG00000141098, GFOD2, glucose-fructose oxidoreductase domain containing 2, [RH, Score=57.8, Expect=2e-08]} {Mouse: ENSMUSG00000013150, Gfod2, glucose-fructose oxidoreductase domain containing 2, [RH, Score=57.4, Expect=2e-08]} {RNA1509_36239} {RNA1310_15767} {RNA815_6344.1}
47. MligTC455_54103 21 0.43 Mlig455_052513

Neo: -

Age: logFC(26M/2M)=0.666

 0.95 - - 0.950 - - - Mlig455_052513 {REF} {Length: 1830} {TRANSSPLICED} {RNA1310_29892} {RNA815_39834}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA