Data search
Results for MligTC455_53828
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53828 | 16 | 0.33 | Mlig455_070862 | Neo: - Age: - |
Mlig455_070862 {REF} {Length: 389} {NoTransDecoderORF} {RNA1509_33299} {RNA1310_49265} {RNA815_41488} |
Cumulative graph for MligTC455_53828
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.794 | 0.608 | 1.00000 | 1.00000 | |
| RegionR2 | 1.934 | 0.608 | 0.69314 | 1.00000 | |
| RegionR3 | 1.163 | 0.608 | 0.43658 | 0.95379 | |
| RegionR4 | -1.318 | 0.608 | 0.99934 | 1.00000 | |
| RegionR5 | 2.046 | 0.608 | 0.27357 | 0.59954 | |
| RegionR6 | -0.831 | 0.608 | 0.99940 | 1.00000 | |
| RegionR7 | -1.02 | 0.608 | 0.99933 | 1.00000 | |
| RegionR8 | -1.182 | 0.608 | 0.99937 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.837 | 0.608 | 1.00000 | 1.00000 | |
| RegenerationR2 | 1.529 | 0.608 | 0.49795 | 0.87080 | |
| RegenerationR3 | 0.718 | 0.608 | 0.69998 | 0.94753 | |
| RegenerationR4 | 3.569 | 0.608 | 0.42055 | 0.82589 | |
| RegenerationR5 | -0.456 | 0.608 | 0.67650 | 0.94343 | |
| RegenerationR6 | 1.556 | 0.608 | 1.00000 | 1.00000 | |
| RegenerationBL | 1.628 | 0.608 | 0.99970 | 1.00000 | |
| RegenerationTP | 1.206 | 0.608 | 1.00000 | 1.00000 |
Genes with expression patterns similar to MligTC455_53828
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53828 | 16 | 0.33 | Mlig455_070862 | Neo: - Age: - |
1 | - | - | - | - | - | 1.000 | Mlig455_070862 {REF} {Length: 389} {NoTransDecoderORF} {RNA1509_33299} {RNA1310_49265} {RNA815_41488} | |
| 2. | MligTC455_07075 | 23 | 0.48 | Mlig455_017838 | Neo: Int S/G2/M Age: - |
0.976 | - | - | - | - | - | 0.976 | Mlig455_017838 {REF} {Length: 589} {NoTransDecoderORF} {RNA1509_13746} {RNA1310_17949} {RNA815_52124} | |
| 3. | MligTC455_53500 | 32 | 0.66 | Mlig455_009118 | Neo: - Age: - |
0.969 | - | - | - | - | - | 0.969 | Mlig455_009118 {REF} {Length: 2320} {RNA1509_16338, RNA1509_3633} {RNA1310_36186, RNA1509_16338} {RNA1509_16338, RNA815_22645} | |
| 4. | MligTC455_15731 | 36 | 0.76 | Mlig455_045491 | Neo: - Age: - |
0.963 | - | - | - | - | - | 0.963 | Mlig455_045491 {REF} {Length: 560} {NoTransDecoderORF} {RNA1509_38091} {RNA1310_15069.1} {RNA815_11643} | |
| 5. | MligTC455_21736 | 54 | 1.12 | Mlig455_023919, Mlig455_040958, Mlig455_057346 | Neo: Germline Age: logFC(26M/2M)=-0.873 |
RTL1 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_023919 {REF} {Length: 557} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=93.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=85.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=47.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=76.3, Expect=1e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=174, Expect=5e-49]} {RNA1509_49309} {RNA1310_936} {RNA815_13565} Mlig455_040958 {REF} {Length: 4329} {Pfam: Integrase core domain [PF00665.28, score=33.0]; Integrase core domain [PF13683.8, score=23.1]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=58.5, Expect=5e-10]} {RNA1509_30470} {RNA1310_936} {RNA815_2209} Mlig455_057346 {REF} {Length: 4336} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=109.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=90.8]; Integrase zinc binding domain [PF17921.3, score=61.0]; Integrase core domain [PF00665.28, score=42.4]; H2C2 zinc finger [PF09337.12, score=36.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.7]; Integrase core domain [PF13683.8, score=20.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=77.8, Expect=1e-13]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=264, Expect=4e-73]} {RNA1509_30470, RNA1509_49309, RNA1509_8154} {RNA1310_936, RNA1509_30470, RNA1509_49309, RNA1509_8154} {RNA1509_30470, RNA1509_49309, RNA1509_8154, RNA815_2209} |
| 6. | MligTC455_17088 | 56 | 1.16 | Mlig455_022778 | Neo: - Age: logFC(26M/2M)=-0.737 |
0.956 | - | - | - | - | - | 0.956 | Mlig455_022778 {REF} {Length: 2080} {RNA1509_56619} {RNA1310_21133.1} {RNA815_8631.1} |