M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_15731

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_15731 36 0.76 Mlig455_045491

Neo: -

Age: -

 Mlig455_045491 {REF} {Length: 560} {NoTransDecoderORF} {RNA1509_38091} {RNA1310_15069.1} {RNA815_11643}

Cumulative graph for MligTC455_15731

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.397 1.132 1.00000 1.00000
RegionR2 1.571 1.132 0.31572 0.70658
RegionR3 -0.214 1.132 0.86165 1.00000
RegionR4 0.935 1.132 0.50365 0.83044
RegionR5 1.622 1.132 0.20528 0.49851
RegionR6 1.048 1.132 0.46633 1.00000
RegionR7 1.444 1.132 0.39818 1.00000
RegionR8 -3.008 1.132 0.99976 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.321 1.132 1.00000 1.00000
RegenerationR2 -0.082 1.132 0.92148 1.00000
RegenerationR3 0.109 1.132 0.89635 1.00000
RegenerationR4 1.447 1.132 0.21484 0.66151
RegenerationR5 -1.001 1.132 0.34151 0.75860
RegenerationR6 -0.423 1.132 0.76092 0.95717
RegenerationBL -2.673 1.132 0.99993 1.00000
RegenerationTP 2.078 1.132 0.37780 0.81326


Genes with expression patterns similar to MligTC455_15731

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_15731 36 0.76 Mlig455_045491

Neo: -

Age: -

 4 1.000 - - 1.000 1.000 1.000 Mlig455_045491 {REF} {Length: 560} {NoTransDecoderORF} {RNA1509_38091} {RNA1310_15069.1} {RNA815_11643}
2. MligTC455_15232 178 3.71 Mlig455_049868

Neo: -

Age: -

 1.72 0.759 - - - 0.961 - Mlig455_049868 {REF} {Length: 1412} {Dmel: FBgn0003374, Sgs4, Salivary gland secretion 4, [Score=84.0, Expect=4e-18]} {Smed: dd_Smed_v6_1965_0_1, dd_Smed_v6_1965_0_1, [Score=47.0, Expect=1e-05]} {RNA1509_38184} {RNA1310_48376} {RNA815_27513.2}
3. MligTC455_42361 60 1.25 Mlig455_046645

Neo: -

Age: -

 1.675 0.720 - - - 0.955 - Mlig455_046645 {REF} {Length: 4174} {TRANSSPLICED} {RNA1509_14274} {RNA1310_2883.1, RNA1509_14274} {RNA1509_14274, RNA815_1000}
4. MligTC455_46176 40 0.83 Mlig455_063902

Neo: Int S/G2/M

Age: -

 0.984 - - - - 0.984 - Mlig455_063902 {REF} {Length: 2105} {RNA1509_8906} {RNA1310_18621.1} {RNA815_15980.1}
5. MligTC455_37927 29 0.59 Mlig455_005071, Mlig455_014052, Mlig455_025140, Mlig455_039469, Mlig455_070126

Neo: -

Age: -

 0.982 - - - - 0.982 -

Mlig455_005071 {REF} {Length: 965} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=28.7]; Myb/SANT-like DNA-binding domain [PF13837.8, score=20.2]} {RNA1310_46038}

Mlig455_014052 {REF} {Length: 1489} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=32.8]; Myb/SANT-like DNA-binding domain [PF13837.8, score=22.5]} {RNA1310_68333}

Mlig455_025140 {REF} {Length: 761} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=35.9]; Myb/SANT-like DNA-binding domain [PF13837.8, score=23.0]} {RNA1310_46038}

Mlig455_039469 {REF} {Length: 1212} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=25.1]} {RNA1310_46038} {RNA815_30681}

Mlig455_070126 {REF} {Length: 1489} {Pfam: Myb/SANT-like DNA-binding domain [PF13873.8, score=32.8]; Myb/SANT-like DNA-binding domain [PF13837.8, score=22.5]} {RNA1310_68333}
6. MligTC455_30180 41 0.85 Mlig455_009174

Neo: -

Age: Up-Down-Up

 KIDINS220 0.981 - - - - 0.981 - Mlig455_009174 {REF} {Length: 4514} {Pfam: Mab-21 protein [PF03281.16, score=38.4]; Ankyrin repeats (3 copies) [PF12796.9, score=33.2]; Ankyrin repeat [PF13606.8, score=23.6]; Ankyrin repeats (many copies) [PF13857.8, score=23.2]; Integrase core domain [PF00665.28, score=22.4]} {Human: ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=52.0, Expect=8e-06]; ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=51.2, Expect=1e-05]; ENSG00000165887, ANKRD2, ankyrin repeat domain 2, [Score=50.4, Expect=1e-05]} {Mouse: ENSMUSG00000078487, Ankrd65, ankyrin repeat domain 65, [Score=59.3, Expect=1e-08]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=52.4, Expect=3e-06]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=63.5, Expect=6e-10]} {RNA1509_48615} {RNA1310_1764.1} {RNA815_3668.1}
7. MligTC455_21736 54 1.12 Mlig455_023919, Mlig455_040958, Mlig455_057346

Neo: Germline

Age: logFC(26M/2M)=-0.873

 RTL1 0.977 - - - - - 0.977

Mlig455_023919 {REF} {Length: 557} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=93.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=85.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=47.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=76.3, Expect=1e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=174, Expect=5e-49]} {RNA1509_49309} {RNA1310_936} {RNA815_13565}

Mlig455_040958 {REF} {Length: 4329} {Pfam: Integrase core domain [PF00665.28, score=33.0]; Integrase core domain [PF13683.8, score=23.1]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=58.5, Expect=5e-10]} {RNA1509_30470} {RNA1310_936} {RNA815_2209}

Mlig455_057346 {REF} {Length: 4336} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=109.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=90.8]; Integrase zinc binding domain [PF17921.3, score=61.0]; Integrase core domain [PF00665.28, score=42.4]; H2C2 zinc finger [PF09337.12, score=36.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.7]; Integrase core domain [PF13683.8, score=20.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=77.8, Expect=1e-13]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=264, Expect=4e-73]} {RNA1509_30470, RNA1509_49309, RNA1509_8154} {RNA1310_936, RNA1509_30470, RNA1509_49309, RNA1509_8154} {RNA1509_30470, RNA1509_49309, RNA1509_8154, RNA815_2209}
8. MligTC455_32280 64 1.34 Mlig455_011932, Mlig455_047803, Mlig455_070958, Mlig455_070959

Neo: Germline

Age: Down-Up-Down

Region-enriched R3: 5.180/0.00563

 0.975 - - - - 0.975 -

Mlig455_011932 {REF} {Length: 1608} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF07727.16, score=178.0]} {RNA1310_256.1} {RNA815_3111}

Mlig455_047803 {REF} {Length: 2197} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF07727.16, score=264.7]} {RNA1310_256.1} {RNA815_3111}

Mlig455_070958 {REF} {Length: 843} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF07727.16, score=262.6]; gag-polypeptide of LTR copia-type [PF14223.8, score=151.2]; Integrase core domain [PF00665.28, score=60.8]; GAG-pre-integrase domain [PF13976.8, score=43.6]; Domain of unknown function (DUF4219) [PF13961.8, score=29.0]; Integrase core domain [PF13683.8, score=19.6]} {RNA1310_256.1} {RNA815_3111}

Mlig455_070959 {REF} {Length: 549} {NoTransDecoderORF} {RNA1310_256.1} {RNA815_32599.2}
9. MligTC455_20010 83 1.72 Mlig455_003143, Mlig455_062747

Neo: -

Age: Up-Down-Down

 0.973 - - - - - 0.973

Mlig455_003143 {REF} {Length: 2444} {NoTransDecoderORF} {RNA1509_20444} {RNA1310_68389} {RNA815_19417}

Mlig455_062747 {REF} {Length: 1276} {NoTransDecoderORF} {RNA1509_20444} {RNA1310_126134} {RNA815_134.1}
10. MligTC455_28587 1330 27.7 Mlig455_002542, Mlig455_047505

Neo: -

Age: -

Region-enriched R4: 4.665/0.00011

 0.973 - - - - 0.973 -

Mlig455_002542 {REF} {Length: 252} {NoTransDecoderORF} {RNA1310_10854.2} {RNA815_29999}

Mlig455_047505 {REF} {Length: 31} {NoTransDecoderORF}
11. MligTC455_13923 18 0.38 Mlig455_027566, Mlig455_039121

Neo: -

Age: -

 0.972 - - - - 0.972 -

Mlig455_027566 {REF} {Length: 1444} {NoTransDecoderORF} {RNA1509_58025} {RNA1310_89044} {RNA815_59752}

Mlig455_039121 {REF} {Length: 395} {NoTransDecoderORF} {RNA1509_58025} {RNA1310_3355.1} {RNA815_59752}
12. MligTC455_35238 25 0.51 Mlig455_041811

Neo: -

Age: Up-Down-Up

 0.972 - - - - - 0.972 Mlig455_041811 {REF} {Length: 1433} {Pfam: BRCA1 C Terminus (BRCT) domain [PF00533.28, score=20.6]} {RNA1509_55191} {RNA1310_18594} {RNA815_15631}
13. MligTC455_26306 88 1.83 Mlig455_042029

Neo: -

Age: -

 0.971 - - - - 0.971 - Mlig455_042029 {REF} {Length: 1756} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=172.1]; Tetratricopeptide repeat [PF13424.8, score=21.0]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=134, Expect=2e-37]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=111, Expect=6e-29]} {RNA1509_30138} {RNA1310_37045} {RNA815_18403}
14. MligTC455_05707 923 19.23 Mlig455_049603

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.203

Region-enriched R7: 6.518/0.00000
Region-enriched R8: 5.082/0.00021

Regeneration-depleted BL: -10.878
Regeneration-depleted R6: -8.619

 0.97 - - - - 0.970 - Mlig455_049603 {REF} {Length: 5184} {Pfam: MAC/Perforin domain [PF01823.21, score=54.1]} {RNA1509_16420, RNA1509_29603, RNA1509_35956, RNA1509_57526, RNA1509_94} {RNA1310_1237.1, RNA1509_16420, RNA1509_29603, RNA1509_35956, RNA1509_57526} {RNA1509_16420, RNA1509_29603, RNA1509_35956, RNA1509_57526, RNA815_324.2}
15. MligTC455_12502 27 0.56 Mlig455_023559, Mlig455_058927

Neo: -

Age: -

 0.97 - - - - 0.970 -

Mlig455_023559 {REF} {Length: 239} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_32550} {RNA1310_57270} {RNA815_14295}

Mlig455_058927 {REF} {Length: 234} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38113} {RNA1310_57270} {RNA815_14295}
16. MligTC455_12526 15 0.31 Mlig455_002108

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_002108 {REF} {Length: 1517} {NoTransDecoderORF} {RNA1310_38807} {RNA815_47102}
17. MligTC455_46106 17 0.35 Mlig455_005750

Neo: -

Age: -

 NEUROD1 0.97 - - - - 0.970 - Mlig455_005750 {REF} {Length: 2658} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=57.3]} {Human: ENSG00000162992, NEUROD1, neuronal differentiation 1, [Score=63.9, Expect=1e-10]; ENSG00000123307, NEUROD4, neuronal differentiation 4, [Score=63.2, Expect=2e-10]; ENSG00000181965, NEUROG1, neurogenin 1, [Score=62.8, Expect=1e-10]; ENSG00000146618, FERD3L, Fer3 like bHLH transcription factor, [Score=62.8, Expect=3e-11]; ENSG00000168267, PTF1A, pancreas associated transcription factor 1a, [Score=61.6, Expect=5e-10]; ENSG00000171532, NEUROD2, neuronal differentiation 2, [Score=61.2, Expect=9e-10]; ENSG00000260428, SCX, scleraxis bHLH transcription factor, [Score=60.8, Expect=3e-10]; ENSG00000125878, TCF15, transcription factor 15, [Score=60.8, Expect=3e-10]} {Mouse: ENSMUSG00000048015, Neurod4, neurogenic differentiation 4, [Score=65.1, Expect=3e-11]; ENSMUSG00000068079, Tcf15, transcription factor 15, [Score=64.7, Expect=1e-11]; ENSMUSG00000034701, Neurod1, neurogenic differentiation 1, [Score=63.9, Expect=8e-11]; ENSMUSG00000046518, Ferd3l, Fer3 like bHLH transcription factor, [Score=63.5, Expect=1e-11]; ENSMUSG00000048904, Neurog1, neurogenin 1, [Score=62.8, Expect=8e-11]} {Dmel: FBgn0037475, Fer1, 48 related 1, [Score=70.9, Expect=1e-13]} {Celegans: WBGene00001954, hlh-10, Helix Loop Helix, [RH, Score=57.0, Expect=2e-09]} {Smed: dd_Smed_v6_6869_0_1, dd_Smed_v6_6869_0_1, [RH, Score=68.2, Expect=2e-13]} {RNA1310_27559} {RNA815_55155}
18. MligTC455_22067 76 1.59 Mlig455_001752, Mlig455_001775

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R5: 4.257/0.00021

 NANOS1 0.968 - - - - 0.968 -

Mlig455_001752 {REF} {Length: 2806} {Pfam: Nanos RNA binding domain [PF05741.15, score=79.7]} {Human: ENSG00000188613, NANOS1, nanos C2HC-type zinc finger 1, [RH, Score=82.4, Expect=2e-17]; ENSG00000188425, NANOS2, nanos C2HC-type zinc finger 2, [RH, Score=81.6, Expect=2e-18]} {Mouse: ENSMUSG00000072437, Nanos1, nanos C2HC-type zinc finger 1, [RH, Score=83.2, Expect=5e-18]; ENSMUSG00000051965, Nanos2, nanos C2HC-type zinc finger 2, [RH, Score=79.3, Expect=1e-17]} {Dmel: FBgn0002962, nos, Nitric oxide synthase, [Score=74.7, Expect=9e-15]} {Smed: dd_Smed_v6_10484_0_1, dd_Smed_v6_10484_0_1, [RH, Score=114, Expect=6e-30]} {RNA1310_14325} {RNA815_45506}

Mlig455_001775 {REF} {Length: 2572} {Pfam: Nanos RNA binding domain [PF05741.15, score=79.5]} {Human: ENSG00000188613, NANOS1, nanos C2HC-type zinc finger 1, [RH, Score=82.4, Expect=3e-17]; ENSG00000188425, NANOS2, nanos C2HC-type zinc finger 2, [RH, Score=81.6, Expect=3e-18]} {Mouse: ENSMUSG00000072437, Nanos1, nanos C2HC-type zinc finger 1, [RH, Score=83.2, Expect=1e-17]; ENSMUSG00000051965, Nanos2, nanos C2HC-type zinc finger 2, [RH, Score=79.7, Expect=1e-17]} {Dmel: FBgn0002962, nos, Nitric oxide synthase, [Score=73.9, Expect=3e-14]} {Smed: dd_Smed_v6_10484_0_1, dd_Smed_v6_10484_0_1, [RH, Score=113, Expect=3e-29]} {RNA1310_14325} {RNA815_51586}
19. MligTC455_40184 660 13.74 Mlig455_004167, Mlig455_004192

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.655

 0.968 - - - - 0.968 -

Mlig455_004167 {REF} {Length: 1157} {RNA1509_29172, RNA1509_51059} {RNA1310_10204, RNA1509_29172, RNA1509_51059} {RNA1509_29172, RNA1509_51059, RNA815_19579}

Mlig455_004192 {REF} {Length: 887} {RNA1509_51059, RNA1509_60087} {RNA1310_10204, RNA1509_60087} {RNA1509_60087, RNA815_19579}
20. MligTC455_57616 11 0.23 Mlig455_029418

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_029418 {REF} {Length: 242} {NoTransDecoderORF}
21. MligTC455_14361 30 0.62 Mlig455_018338

Neo: Irradiation

Age: Up-Down-Up

 0.966 - - - - 0.966 - Mlig455_018338 {REF} {Length: 2514} {Pfam: Galactosyltransferase [PF01762.23, score=19.2]} {RNA1509_39518} {RNA1310_47457} {RNA815_35070}
22. MligTC455_21369 20 0.41 Mlig455_004493

Neo: Germline

Age: -

 0.966 - - - - 0.966 - Mlig455_004493 {REF} {Length: 649} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF07727.16, score=184.3]} {RNA1310_256.1} {RNA815_3111}
23. MligTC455_36961 50 1.05 Mlig455_031335

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_031335 {REF} {Length: 519} {RNA1509_53976} {RNA1310_63130} {RNA815_33431}
24. MligTC455_15990 53 1.1 Mlig455_053183

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_053183 {REF} {Length: 1875} {RNA1310_81425}
25. MligTC455_30575 30 0.62 Mlig455_038999

Neo: -

Age: -

 0.965 - - - - - 0.965 Mlig455_038999 {REF} {Length: 1377} {Pfam: PAN domain [PF00024.28, score=21.3]} {RNA1509_48973} {RNA1310_53414} {RNA815_46038}
26. MligTC455_07090 36 0.74 Mlig455_036358

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_036358 {REF} {Length: 626} {NoTransDecoderORF} {RNA1310_49246}
27. MligTC455_32515 262 5.45 Mlig455_052102

Neo: -

Age: Up-Down-Down

 RNFT2 0.964 - - - - 0.964 - Mlig455_052102 {REF} {Length: 2229} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=26.8]; RING-H2 zinc finger domain [PF12678.9, score=26.2]; Ring finger domain [PF13639.8, score=25.7]; zinc-RING finger domain [PF14634.8, score=24.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=23.2]; RING-type zinc-finger [PF13445.8, score=19.0]} {Human: ENSG00000135119, RNFT2, ring finger protein, transmembrane 2, [Score=81.6, Expect=1e-16]} {Mouse: ENSMUSG00000032850, Rnft2, ring finger protein, transmembrane 2, [Score=80.9, Expect=2e-16]} {Celegans: WBGene00022502, ZC13.1, [Score=50.1, Expect=1e-06]} {RNA1509_39112, RNA1509_52203, RNA1509_53909} {RNA1310_18608, RNA1509_39112, RNA1509_52203, RNA1509_53909} {RNA1509_39112, RNA1509_52203, RNA1509_53909, RNA815_11999}
28. MligTC455_20782 91 1.9 Mlig455_066519

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-1.321

Region-enriched R8: 5.950/0.00576
Region-enriched R7: 5.330/0.01039

 0.963 - - - - 0.963 - Mlig455_066519 {REF} {Length: 3710} {RNA1509_53671} {RNA1310_35957.1} {RNA815_13121.1}
29. MligTC455_53828 16 0.33 Mlig455_070862

Neo: -

Age: -

 0.963 - - - - - 0.963 Mlig455_070862 {REF} {Length: 389} {NoTransDecoderORF} {RNA1509_33299} {RNA1310_49265} {RNA815_41488}
30. MligTC455_08626 34 0.7 Mlig455_016338

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_016338 {REF} {Length: 1057} {NoTransDecoderORF}
31. MligTC455_12309 17 0.36 Mlig455_043008

Neo: Irradiation

Age: Up-Down-Down

 ABCA10 0.962 - - - - 0.962 - Mlig455_043008 {REF} {Length: 5813} {Pfam: ABC transporter [PF00005.29, score=175.6]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=76.3]; ABC-2 family transporter protein [PF12698.9, score=38.5]; AAA domain [PF13476.8, score=29.2]; AAA ATPase domain [PF13175.8, score=28.6]; RsgA GTPase [PF03193.18, score=27.5]; NB-ARC domain [PF00931.24, score=24.9]; AAA domain [PF13401.8, score=24.0]; P-loop containing region of AAA domain [PF13555.8, score=23.9]; AAA domain [PF13604.8, score=23.9]; AAA ATPase domain [PF13191.8, score=22.9]; RecF/RecN/SMC N terminal domain [PF02463.21, score=21.9]} {Human: ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=236, Expect=3e-62]; ENSG00000154258, ABCA9, ATP binding cassette subfamily A member 9, [Score=226, Expect=5e-59]; ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=225, Expect=1e-58]} {Mouse: ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=223, Expect=6e-58]; ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=215, Expect=1e-55]} {Dmel: FBgn0031170, CG1718, [Score=185, Expect=1e-46]} {Celegans: WBGene00000421, ced-7, ABC transporter ced-7, [Score=295, Expect=9e-81]} {Smed: dd_Smed_v6_10304_0_1, dd_Smed_v6_10304_0_1, [Score=176, Expect=4e-44]} {RNA1509_6974} {RNA1310_809} {RNA815_234.1}
32. MligTC455_13958 157 3.27 Mlig455_003609

Neo: -

Age: -

Region-enriched R3: 2.933/0.00923

 0.962 - - - - 0.962 - Mlig455_003609 {REF} {Length: 1179} {NoTransDecoderORF} {RNA1509_57187} {RNA1310_83315, RNA1509_57187} {RNA1509_57187, RNA815_54608}
33. MligTC455_51887 123 2.56 Mlig455_009015

Neo: Int S/G2/M

Age: -

Region-enriched R4: 4.290/0.00000

 0.962 - - - - 0.962 - Mlig455_009015 {REF} {Length: 2778} {Pfam: Nucleoside 2-deoxyribosyltransferase [PF05014.17, score=23.6]} {Mouse: ENSMUSG00000040658, Dnph1, 2'-deoxynucleoside 5'-phosphate N-hydrolase 1, [Score=48.1, Expect=5e-07]} {RNA1509_34641} {RNA1310_41930} {RNA815_14966}
34. MligTC455_07536 6 0.12 Mlig455_051582

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_051582 {REF} {Length: 1633} {RNA1509_26120} {RNA1310_33604.2} {RNA815_20504}
35. MligTC455_11178 117 2.44 Mlig455_056466

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.399

Region-enriched R4: 4.829/0.00000

 SLC16A9 0.961 - - - - 0.961 - Mlig455_056466 {REF} {Length: 3961} {Pfam: Major Facilitator Superfamily [PF07690.18, score=67.9]} {Human: ENSG00000165449, SLC16A9, solute carrier family 16 member 9, [Score=132, Expect=5e-33]; ENSG00000163053, SLC16A14, solute carrier family 16 member 14, [Score=132, Expect=5e-33]} {Mouse: ENSMUSG00000037762, Slc16a9, solute carrier family 16 (monocarboxylic acid transporters), member 9, [Score=127, Expect=2e-31]; ENSMUSG00000041920, Slc16a6, solute carrier family 16 (monocarboxylic acid transporters), member 6, [Score=124, Expect=2e-30]; ENSMUSG00000026220, Slc16a14, solute carrier family 16 (monocarboxylic acid transporters), member 14, [Score=121, Expect=3e-29]} {Dmel: FBgn0023549, Mct1, Monocarboxylate transporter 1, [Score=119, Expect=3e-28]} {Celegans: WBGene00015273, mct-2, MonoCarboxylate Transporter family, [Score=124, Expect=1e-30]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=137, Expect=5e-35]} {RNA1509_42957} {RNA1310_19535.1, RNA1509_42957} {RNA1509_42957, RNA815_27581}
36. MligTC455_22144 227 4.73 Mlig455_016643, Mlig455_034917, Mlig455_044862, Mlig455_053181, Mlig455_058559, Mlig455_063638

Neo: -

Age: Down-Up-Down

 0.961 - - - - 0.961 -

Mlig455_016643 {REF} {Length: 796} {Pfam: Helix-turn-helix domain [PF13518.8, score=26.7]; Homeodomain-like domain [PF13384.8, score=24.6]; Winged helix-turn helix [PF13551.8, score=22.4]; CENP-B N-terminal DNA-binding domain [PF04218.15, score=19.1]} {RNA1509_22932} {RNA1310_54181} {RNA815_224.1}

Mlig455_034917 {REF} {Length: 751} {RNA1509_22932} {RNA1310_19377.1} {RNA815_224.1}

Mlig455_044862 {REF} {Length: 540} {Pfam: DDE superfamily endonuclease [PF13358.8, score=19.7]} {RNA1310_19377.1} {RNA815_224.1}

Mlig455_053181 {REF} {Length: 769} {NoTransDecoderORF} {RNA1509_57429} {RNA1310_73907} {RNA815_44596}

Mlig455_058559 {REF} {Length: 690} {Pfam: Helix-turn-helix domain [PF13518.8, score=26.5]; Homeodomain-like domain [PF13384.8, score=24.4]; Winged helix-turn helix [PF13551.8, score=22.3]; CENP-B N-terminal DNA-binding domain [PF04218.15, score=19.1]} {RNA1310_54181} {RNA815_224.1}

Mlig455_063638 {REF} {Length: 490} {RNA1310_19377.1} {RNA815_224.1}
37. MligTC455_05994 19 0.39 Mlig455_062719

Neo: -

Age: Up-Down-Up

 0.96 - - - - 0.960 - Mlig455_062719 {REF} {Length: 3592} {Pfam: Transposase protein [PF12017.10, score=90.1]; THAP domain [PF05485.14, score=42.6]} {RNA1509_59289} {RNA1310_65815}
38. MligTC455_07135 38 0.79 Mlig455_022075

Neo: Germline

Age: -

 0.96 - - - - 0.960 - Mlig455_022075 {REF} {Length: 756} {RNA1509_57357} {RNA1310_46616.2, RNA1509_57357} {RNA1509_57357, RNA815_29890}
39. MligTC455_14480 9 0.19 Mlig455_057564

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_057564 {REF} {Length: 2088} {Pfam: Sushi repeat (SCR repeat) [PF00084.22, score=20.0]} {Smed: dd_Smed_v6_41498_0_1, dd_Smed_v6_41498_0_1, [Score=146, Expect=2e-37]} {RNA1310_34907} {RNA815_42361}
40. MligTC455_46000 520 10.83 Mlig455_000630

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.078

Region-enriched R4: 3.276/0.00197

 0.96 - - - - 0.960 - Mlig455_000630 {REF} {Length: 684} {RNA1509_12508, RNA1509_25632} {RNA1310_95202.1, RNA1509_12508, RNA1509_25632} {RNA1509_12508, RNA1509_25632, RNA815_43926}
41. MligTC455_46694 16 0.34 Mlig455_058779

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_058779 {REF} {Length: 301} {NoTransDecoderORF} {RNA1509_51543} {RNA1310_60199} {RNA815_641.1}
42. MligTC455_48407 103 2.14 Mlig455_033382

Neo: -

Age: -

Region-specific R4: 5.171

 0.96 - - - - 0.960 - Mlig455_033382 {REF} {Length: 435} {RNA1509_54740, RNA1509_56133} {RNA1310_8398, RNA1509_54740} {RNA1509_54740, RNA815_65067}
43. MligTC455_38592 9 0.19 Mlig455_068348

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_068348 {REF} {Length: 979} {RNA1310_40042} {RNA815_34279}
44. MligTC455_14552 16 0.33 Mlig455_065727

Neo: -

Age: -

Region-enriched R2: 7.671/0.03351

 0.958 - - - - 0.958 - Mlig455_065727 {REF} {Length: 518} {NoTransDecoderORF} {RNA1509_32371} {RNA1310_83550} {RNA815_28290}
45. MligTC455_15516 107 2.23 Mlig455_052960

Neo: Germline

Age: Down-Down-Up

Region-specific R4: 5.444

Region-enriched R4: 3.219/0.00440

 0.958 - - - - 0.958 - Mlig455_052960 {REF} {Length: 931} {RNA1509_6281} {RNA1310_42233} {RNA815_26722}
46. MligTC455_26535 92 1.91 Mlig455_028631

Neo: -

Age: logFC(26M/2M)=-0.989

 0.958 - - - - 0.958 - Mlig455_028631 {REF} {Length: 2945} {TRANSSPLICED} {Pfam: Guanine nucleotide exchange factor synembryn [PF10165.11, score=55.1]} {RNA1509_37009, RNA1509_38508} {RNA1310_10694.2, RNA1509_37009, RNA1509_38508} {RNA1509_37009, RNA1509_38508, RNA815_4977}
47. MligTC455_06142 23 0.49 Mlig455_063912

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_063912 {REF} {Length: 117} {NoTransDecoderORF} {RNA1310_38970}
48. MligTC455_20343 24 0.51 Mlig455_011024

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_011024 {REF} {Length: 104} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_50783} {RNA1310_2608} {RNA815_1620}
49. MligTC455_40072 24 0.51 Mlig455_010359

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_010359 {REF} {Length: 1032} {RNA1509_6056} {RNA1310_433} {RNA815_9169}
50. MligTC455_52929 36 0.76 Mlig455_055215

Neo: -

Age: -

 MAP3K19 0.955 - - - - 0.955 - Mlig455_055215 {REF} {Length: 3182} {Pfam: Protein kinase domain [PF00069.27, score=136.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=108.2]; PH domain [PF00169.31, score=31.0]; Fungal protein kinase [PF17667.3, score=29.5]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=116, Expect=6e-27]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=117, Expect=8e-28]} {Dmel: FBgn0014006, Ask1, Apoptotic signal-regulating kinase 1, [Score=102, Expect=2e-22]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=98.2, Expect=2e-21]} {Smed: dd_Smed_v6_4849_0_1, dd_Smed_v6_4849_0_1, [Score=105, Expect=6e-24]} {RNA1509_26827} {RNA1310_30186} {RNA815_26192}
51. MligTC455_06815 70 1.46 Mlig455_026013, Mlig455_070440

Neo: -

Age: -

Region-enriched R8: 5.840/0.01787

 0.954 - - - - 0.954 -

Mlig455_026013 {REF} {Length: 978} {NoTransDecoderORF} {RNA1310_100888} {RNA815_20773}

Mlig455_070440 {REF} {Length: 978} {NoTransDecoderORF} {RNA1310_100888} {RNA815_20773}
52. MligTC455_54172 139 2.89 Mlig455_010947

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.319

Region-enriched R4: 2.570/0.04231

 0.954 - - - - 0.954 - Mlig455_010947 {REF} {Length: 2780} {RNA1509_21301, RNA1509_27892, RNA1509_55865} {RNA1310_14403, RNA1509_21301, RNA1509_27892, RNA1509_55865} {RNA1509_21301, RNA1509_27892, RNA1509_55865, RNA815_5347}
53. MligTC455_24755 4 0.08 Mlig455_016707

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_016707 {REF} {Length: 1124} {Pfam: PAN domain [PF00024.28, score=19.5]} {Smed: dd_Smed_v6_85740_0_1, dd_Smed_v6_85740_0_1, [RH, Score=66.6, Expect=4e-14]} {RNA1310_47779} {RNA815_39270}
54. MligTC455_42020 58 1.22 Mlig455_059333

Neo: -

Age: -

 WSCD2 0.953 - - - - 0.953 - Mlig455_059333 {REF} {Length: 1392} {Pfam: WSC domain [PF01822.21, score=60.0]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=48.9, Expect=1e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=48.5, Expect=1e-06]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=60.5, Expect=9e-11]} {RNA1509_57286} {RNA1310_34378} {RNA815_35918}
55. MligTC455_54174 62 1.3 Mlig455_033112

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.497

 0.952 - - - - 0.952 - Mlig455_033112 {REF} {Length: 2671} {RNA1509_21301} {RNA1310_14403} {RNA815_5347}
56. MligTC455_00967 18 0.37 Mlig455_070923

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_070923 {REF} {Length: 620} {Mouse: ENSMUSG00000073490, Ifi207, interferon activated gene 207, [Score=58.2, Expect=3e-10]} {RNA1509_11295} {RNA1310_687} {RNA815_55072.1}
57. MligTC455_30839 19 0.39 Mlig455_027444

Neo: -

Age: -

 0.951 0.951 - - - - - Mlig455_027444 {REF} {Length: 516} {NoTransDecoderORF} {RNA1310_123335}
58. MligTC455_32870 33 0.69 Mlig455_028340

Neo: -

Age: -

 PWWP2A 0.951 - - - - - 0.951 Mlig455_028340 {REF} {Length: 2944} {TRANSSPLICED} {Pfam: PWWP domain [PF00855.19, score=41.1]} {Human: ENSG00000170234, PWWP2A, PWWP domain containing 2A, [Score=65.9, Expect=1e-10]} {Mouse: ENSMUSG00000060260, Pwwp2b, PWWP domain containing 2B, [RH, Score=65.9, Expect=8e-11]; ENSMUSG00000110798, Pwwp2b, PWWP domain containing 2B, [RH, Score=65.9, Expect=8e-11]} {Smed: dd_Smed_v6_11117_0_1, dd_Smed_v6_11117_0_1, [RH, Score=68.9, Expect=3e-12]} {RNA1509_11193, RNA1509_51578} {RNA1310_14175, RNA1509_11193, RNA1509_51578} {RNA1509_11193, RNA1509_51578, RNA815_5362}
59. MligTC455_43444 41 0.86 Mlig455_043262

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_043262 {REF} {Length: 1823} {TRANSSPLICED} {Pfam: NICE-3 protein [PF07406.13, score=83.4]} {Dmel: FBgn0034172, CG6665, [Score=55.5, Expect=2e-08]} {RNA1509_24375} {RNA1310_15514.2} {RNA815_13288}
60. MligTC455_54210 70 1.45 Mlig455_005068

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.568

 LRRC74A 0.951 - - - - - 0.951 Mlig455_005068 {REF} {Length: 4549} {Pfam: Leucine Rich repeat [PF13516.8, score=97.2]; Leucine Rich Repeat [PF00560.35, score=29.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.2]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=186, Expect=2e-51]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=182, Expect=5e-50]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=80.1, Expect=2e-15]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [RH, Score=369, Expect=3e-120]} {RNA1509_24088} {RNA1310_10119} {RNA815_985}
61. MligTC455_17088 56 1.16 Mlig455_022778

Neo: -

Age: logFC(26M/2M)=-0.737

 0.95 - - - - - 0.950 Mlig455_022778 {REF} {Length: 2080} {RNA1509_56619} {RNA1310_21133.1} {RNA815_8631.1}
62. MligTC455_51937 465 9.7 Mlig455_000671

Neo: -

Age: Down-Up-Up

 BBIP1 0.95 - - - - 0.950 - Mlig455_000671 {REF} {Length: 795} {TRANSSPLICED} {Pfam: Cilia BBSome complex subunit 10 [PF14777.8, score=81.5]} {Human: ENSG00000214413, BBIP1, BBSome interacting protein 1, [RH, Score=58.9, Expect=1e-12]} {Mouse: ENSMUSG00000084957, Bbip1, BBSome interacting protein 1, [RH, Score=59.3, Expect=3e-13]} {Dmel: FBgn0260237, CG42511, [RH, Score=40.4, Expect=6e-06]} {Celegans: WBGene00019482, K07C11.10, [RH, Score=43.5, Expect=8e-07]} {Smed: dd_Smed_v6_12991_0_1, dd_Smed_v6_12991_0_1, [Score=59.3, Expect=2e-13]} {RNA1509_11275, RNA1509_30377} {RNA1310_33550, RNA1509_11275, RNA1509_30377} {RNA1509_11275, RNA1509_30377, RNA815_15542}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA