Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_54315 | 1719 | 35.82 | Mlig455_031154 | Neo: Irradiation Age: - Region-enriched R5: 1.397/0.00013 |
CEP95 | Mlig455_031154 {REF} {Length: 1994} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF5745) [PF19016.2, score=70.0]} {Human: ENSG00000258890, CEP95, centrosomal protein 95, [Score=85.1, Expect=5e-17]} {Mouse: ENSMUSG00000018372, Cep95, centrosomal protein 95, [Score=83.6, Expect=9e-17]} {Smed: dd_Smed_v6_8515_0_1, dd_Smed_v6_8515_0_1, [Score=76.3, Expect=1e-14]} {RNA1509_4062} {RNA1310_13760} {RNA815_19737} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -1.417 | 5.352 | 0.13251 | 0.73161 | |
RegionR2 | -0.009 | 5.352 | 0.98458 | 1.00000 | |
RegionR3 | -0.617 | 5.352 | 0.10561 | 0.56850 | |
RegionR4 | -0.395 | 5.352 | 0.32828 | 0.64644 | |
RegionR5 | 1.397 | 5.352 | 0.00000 | 0.00013 | |
RegionR6 | 0.619 | 5.352 | 0.07006 | 0.49307 | |
RegionR7 | -0.261 | 5.352 | 0.56383 | 1.00000 | |
RegionR8 | 0.682 | 5.352 | 0.17649 | 0.75615 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 1.449 | 5.352 | 0.21004 | 0.94956 | |
RegenerationR2 | 0.224 | 5.352 | 0.56954 | 0.90222 | |
RegenerationR3 | 0.598 | 5.352 | 0.16674 | 0.60123 | |
RegenerationR4 | 0.233 | 5.352 | 0.57132 | 0.90196 | |
RegenerationR5 | -0.29 | 5.352 | 0.44764 | 0.82944 | |
RegenerationR6 | 0.353 | 5.352 | 0.38105 | 0.72201 | |
RegenerationBL | 0.48 | 5.352 | 0.25300 | 0.60956 | |
RegenerationTP | 0.047 | 5.352 | 0.92011 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_54315 | 1719 | 35.82 | Mlig455_031154 | Neo: Irradiation Age: - Region-enriched R5: 1.397/0.00013 |
CEP95 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_031154 {REF} {Length: 1994} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF5745) [PF19016.2, score=70.0]} {Human: ENSG00000258890, CEP95, centrosomal protein 95, [Score=85.1, Expect=5e-17]} {Mouse: ENSMUSG00000018372, Cep95, centrosomal protein 95, [Score=83.6, Expect=9e-17]} {Smed: dd_Smed_v6_8515_0_1, dd_Smed_v6_8515_0_1, [Score=76.3, Expect=1e-14]} {RNA1509_4062} {RNA1310_13760} {RNA815_19737} |
2. | MligTC455_54314 | 1737 | 36.2 | Mlig455_031145 | Neo: Irradiation Age: logFC(26M/2M)=0.240 Region-enriched R5: 1.323/0.00010 |
CEP95 | 5.985 | 0.998 | 1.000 | 0.997 | 0.996 | 0.998 | 0.996 | Mlig455_031145 {REF} {Length: 2001} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF5745) [PF19016.2, score=71.0]} {Human: ENSG00000258890, CEP95, centrosomal protein 95, [Score=82.0, Expect=5e-16]} {Mouse: ENSMUSG00000018372, Cep95, centrosomal protein 95, [Score=79.3, Expect=2e-15]} {Smed: dd_Smed_v6_8515_0_1, dd_Smed_v6_8515_0_1, [Score=73.9, Expect=5e-14]} {RNA1509_4062, RNA1509_51472} {RNA1310_13760, RNA1509_4062, RNA1509_51472} {RNA1509_4062, RNA1509_51472, RNA815_19737} |
3. | MligTC455_15823 | 6025 | 125.53 | Mlig455_031852, Mlig455_031938 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.388/0.00002 Regeneration-upregulated BL: 1.361 Regeneration-enriched BL: 1.361 |
CCNB1 | 3.419 | 0.811 | - | - | 0.959 | 0.824 | 0.825 | Mlig455_031852 {REF} {Length: 1803} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=114.4]; Cyclin, C-terminal domain [PF02984.21, score=79.8]} {Human: ENSG00000134057, CCNB1, cyclin B1, [Score=207, Expect=4e-62]} {Mouse: ENSMUSG00000032218, Ccnb2, cyclin B2, [Score=200, Expect=5e-60]; ENSMUSG00000041431, Ccnb1, cyclin B1, [Score=194, Expect=1e-57]} {Dmel: FBgn0000405, CycB, Cyclin B, [Score=182, Expect=2e-52]} {Celegans: WBGene00000867, cyb-2.2, CYclin B, [Score=129, Expect=6e-34]} {Smed: dd_Smed_v6_7837_0_1, dd_Smed_v6_7837_0_1, [Score=109, Expect=1e-26]} {RNA1509_35079} {RNA1310_13754.1} {RNA815_5712.1} Mlig455_031938 {REF} {Length: 2070} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=114.4]; Cyclin, C-terminal domain [PF02984.21, score=79.7]} {Human: ENSG00000134057, CCNB1, cyclin B1, [Score=206, Expect=5e-62]} {Mouse: ENSMUSG00000032218, Ccnb2, cyclin B2, [Score=201, Expect=1e-60]; ENSMUSG00000041431, Ccnb1, cyclin B1, [Score=194, Expect=2e-57]} {Dmel: FBgn0000405, CycB, Cyclin B, [Score=181, Expect=5e-52]} {Celegans: WBGene00000867, cyb-2.2, CYclin B, [Score=129, Expect=6e-34]} {Smed: dd_Smed_v6_7837_0_1, dd_Smed_v6_7837_0_1, [Score=110, Expect=1e-26]} {RNA1509_23408, RNA1509_27076, RNA1509_35079, RNA1509_8675} {RNA1310_13754.1, RNA1509_23408, RNA1509_27076, RNA1509_35079, RNA1509_8675} {RNA1509_23408, RNA1509_27076, RNA1509_35079, RNA1509_8675, RNA815_5712.1} |
4. | MligTC455_20988 | 1051 | 21.9 | Mlig455_035963 | Neo: Irradiation Age: - Region-enriched R5: 2.262/0.00002 |
3.298 | 0.763 | 0.750 | - | 0.963 | - | 0.822 | Mlig455_035963 {REF} {Length: 1101} {TRANSSPLICED} {Pfam: Geminin [PF07412.14, score=23.7]} {RNA1509_12313, RNA1509_12547, RNA1509_20018} {RNA1310_31319, RNA1509_12313, RNA1509_12547, RNA1509_20018} {RNA1509_12313, RNA1509_12547, RNA1509_20018, RNA815_14142} | |
5. | MligTC455_17124 | 484 | 10.08 | Mlig455_002400, Mlig455_060153 | Neo: Irradiation Age: Down-Up-Up Region-enriched R4: 2.442/0.02922 |
NFYC | 3.272 | 0.740 | - | - | 0.954 | 0.729 | 0.849 | Mlig455_002400 {REF} {Length: 2095} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1, RNA1509_28888} {RNA1509_28888, RNA815_29133} Mlig455_060153 {REF} {Length: 2439} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=39.9]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [Score=125, Expect=2e-32]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [Score=124, Expect=4e-33]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [Score=121, Expect=7e-31]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=158, Expect=3e-46]} {RNA1509_28888} {RNA1310_21090.1} {RNA815_29133} |
6. | MligTC455_19419 | 546 | 11.37 | Mlig455_007981 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 2.360/0.00027 |
2.724 | 0.880 | 0.875 | - | 0.969 | - | - | Mlig455_007981 {REF} {Length: 2650} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=38.6]} {RNA1509_28433, RNA1509_33646} {RNA1310_17456.1, RNA1509_28433, RNA1509_33646} {RNA1509_28433, RNA1509_33646, RNA815_21443} | |
7. | MligTC455_19942 | 770 | 16.04 | Mlig455_045672 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.530/0.00045 Regeneration-upregulated BL: 2.332 Regeneration-enriched BL: 2.332 |
RNPS1 | 2.594 | 0.723 | - | - | 0.951 | - | 0.920 | Mlig455_045672 {REF} {Length: 1204} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=46.9]} {Human: ENSG00000205937, RNPS1, RNA binding protein with serine rich domain 1, [RH, Score=119, Expect=6e-32]} {Mouse: ENSMUSG00000034681, Rnps1, ribonucleic acid binding protein S1, [RH, Score=119, Expect=7e-32]} {Dmel: FBgn0037707, RnpS1, RNA-binding protein S1, [RH, Score=94.0, Expect=5e-22]} {Celegans: WBGene00004388, rnp-5, RNP (RRM RNA binding domain) containing, [RH, Score=88.2, Expect=2e-20]} {Smed: dd_Smed_v6_1431_0_1, dd_Smed_v6_1431_0_1, [RH, Score=103, Expect=1e-25]} {RNA1509_14792} {RNA1310_28374, RNA1509_14792} {RNA1509_14792, RNA815_13087} |
8. | MligTC455_29794 | 13232 | 275.67 | Mlig455_008533, Mlig455_023375, Mlig455_068951 | Neo: Neoblast, stringent Age: Down-Up-Up, logFC(26M/2M)=0.338 Regeneration-upregulated BL: 1.258 Regeneration-enriched BL: 1.258 |
DDX39B | 2.558 | - | 0.769 | - | 0.833 | - | 0.956 | Mlig455_008533 {REF} {Length: 1439} Mlig455_023375 {REF} {Length: 1739} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.2]; Helicase conserved C-terminal domain [PF00271.33, score=92.8]; U3-containing 90S pre-ribosomal complex subunit [PF14617.8, score=33.4]; Type III restriction enzyme, res subunit [PF04851.17, score=29.8]} {Human: ENSG00000198563, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000229496, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000235439, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000225859, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000230624, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000215425, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000225073, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000123136, DDX39A, DExD-box helicase 39A, [RH, Score=701, Expect=0.0]} {Mouse: ENSMUSG00000019432, Ddx39b, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B, [RH, Score=716, Expect=0.0]; ENSMUSG00000005481, Ddx39, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, [RH, Score=703, Expect=0.0]} {Dmel: FBgn0014189, Hel25E, Helicase at 25E, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00001840, hel-1, Spliceosome RNA helicase DDX39B homolog, [RH, Score=655, Expect=0.0]} {Smed: dd_Smed_v6_724_0_1, dd_Smed_v6_724_0_1, [RH, Score=714, Expect=0.0]} {RNA1509_16673} {RNA1310_11845, RNA1509_16673} {RNA1509_16673, RNA815_6753} Mlig455_068951 {REF} {Length: 1734} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.2]; Helicase conserved C-terminal domain [PF00271.33, score=92.8]; U3-containing 90S pre-ribosomal complex subunit [PF14617.8, score=33.4]; Type III restriction enzyme, res subunit [PF04851.17, score=29.8]} {Human: ENSG00000225859, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000235439, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000215425, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000225073, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000198563, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000229496, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000230624, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000123136, DDX39A, DExD-box helicase 39A, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000019432, Ddx39b, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B, [RH, Score=716, Expect=0.0]; ENSMUSG00000005481, Ddx39, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, [RH, Score=703, Expect=0.0]} {Dmel: FBgn0014189, Hel25E, Helicase at 25E, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00001840, hel-1, Spliceosome RNA helicase DDX39B homolog, [RH, Score=654, Expect=0.0]} {Smed: dd_Smed_v6_724_0_1, dd_Smed_v6_724_0_1, [RH, Score=713, Expect=0.0]} {RNA1509_16673} {RNA1310_11845} {RNA815_6753} |
9. | MligTC455_30371 | 1006 | 20.96 | Mlig455_056792 | Neo: Int S/G2/M Age: - |
PPHLN1 | 2.504 | 0.761 | - | - | 0.784 | - | 0.959 | Mlig455_056792 {REF} {Length: 4639} {Pfam: Transcriptional regulatory protein LGE1 [PF11488.10, score=33.4]} {Human: ENSG00000134283, PPHLN1, periphilin 1, [RH, Score=82.8, Expect=1e-16]} {Mouse: ENSMUSG00000036167, Pphln1, periphilin 1, [RH, Score=80.9, Expect=2e-16]} {Celegans: WBGene00013307, Y57G11C.9, [Score=56.2, Expect=3e-08]} {Smed: dd_Smed_v6_3002_0_1, dd_Smed_v6_3002_0_1, [Score=112, Expect=7e-27]} {RNA1509_16220, RNA1509_16318, RNA1509_17626} {RNA1310_18930, RNA1509_16220, RNA1509_17626} {RNA1509_16220, RNA1509_17626, RNA815_5252.1} |
10. | MligTC455_31671 | 799 | 16.64 | Mlig455_007386 | Neo: Irradiation Age: - |
RAD21 | 1.834 | - | - | - | 0.960 | - | 0.874 | Mlig455_007386 {REF} {Length: 3384} {TRANSSPLICED} {Pfam: N terminus of Rad21 / Rec8 like protein [PF04825.15, score=137.7]} {Human: ENSG00000164754, RAD21, RAD21 cohesin complex component, [RH, Score=274, Expect=5e-85]} {Mouse: ENSMUSG00000022314, Rad21, RAD21 cohesin complex component, [RH, Score=275, Expect=4e-85]} {Dmel: FBgn0260987, vtd, verthandi, [RH, Score=276, Expect=4e-85]} {Celegans: WBGene00000591, coh-1, COHesin family, [RH, Score=201, Expect=6e-58]} {Smed: dd_Smed_v6_4032_0_1, dd_Smed_v6_4032_0_1, [RH, Score=288, Expect=3e-89]} {RNA1509_59154, RNA1509_59509} {RNA1310_10984.1, RNA1509_59154, RNA1509_59509} {RNA1509_59154, RNA1509_59509, RNA815_23741} |
11. | MligTC455_49140 | 1042 | 21.71 | Mlig455_010490 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.334 |
ZFR | 1.803 | - | - | - | 0.851 | - | 0.952 | Mlig455_010490 {REF} {Length: 3441} {TRANSSPLICED} {Pfam: DZF domain [PF07528.16, score=162.2]; Zinc-finger of C2H2 type [PF12874.9, score=72.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=55.5]} {Human: ENSG00000056097, ZFR, zinc finger RNA binding protein, [RH, Score=468, Expect=8e-149]} {Mouse: ENSMUSG00000022201, Zfr, zinc finger RNA binding protein, [RH, Score=466, Expect=4e-148]} {Dmel: FBgn0263603, Zn72D, Zinc-finger protein at 72D, [RH, Score=311, Expect=6e-92]} {Celegans: WBGene00022388, Y95B8A.8, [RH, Score=324, Expect=4e-98]} {Smed: dd_Smed_v6_3762_0_1, dd_Smed_v6_3762_0_1, [RH, Score=501, Expect=3e-164]} {RNA1509_12494} {RNA1310_3537.1, RNA1509_12494} {RNA1509_12494, RNA815_393.1} |
12. | MligTC455_39817 | 1535 | 31.98 | Mlig455_033826 | Neo: - Age: - |
G3BP2 | 1.795 | - | - | - | 0.950 | - | 0.845 | Mlig455_033826 {REF} {Length: 2160} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=84.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=46.0]; RNA recognition motif [PF16367.7, score=20.2]} {Human: ENSG00000138757, G3BP2, G3BP stress granule assembly factor 2, [RH, Score=130, Expect=1e-32]} {Mouse: ENSMUSG00000029405, G3bp2, GTPase activating protein (SH3 domain) binding protein 2, [RH, Score=130, Expect=9e-33]} {Dmel: FBgn0015778, rin, rasputin, [Score=130, Expect=2e-32]} {Celegans: WBGene00010677, gtbp-1, Ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein, [RH, Score=65.5, Expect=2e-11]} {Smed: dd_Smed_v6_316_0_1, dd_Smed_v6_316_0_1, [Score=134, Expect=3e-35]} {RNA1509_13282, RNA1509_45536, RNA1509_5980} {RNA1310_6247, RNA1509_13282, RNA1509_45536, RNA1509_5980} {RNA1509_13282, RNA1509_45536, RNA1509_5980, RNA815_6098.1} |
13. | MligTC455_29356 | 343 | 7.14 | Mlig455_047854 | Neo: Irradiation Age: - |
TRIM3 | 1.747 | - | - | - | 0.786 | - | 0.961 | Mlig455_047854 {REF} {Length: 5745} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=89.3]; B-box zinc finger [PF00643.26, score=35.4]; 6-bladed beta-propeller [PF17170.6, score=20.7]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=147, Expect=8e-36]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=147, Expect=5e-36]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=465, Expect=5e-147]} {Celegans: WBGene00003559, ncl-1, B-box type zinc finger protein ncl-1, [Score=224, Expect=2e-61]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=546, Expect=0.0]} {RNA1509_45780, RNA1509_55253, RNA1509_7414} {RNA1310_9506.1, RNA1509_45780, RNA1509_55253} {RNA1509_45780, RNA1509_55253, RNA815_13729.1} |
14. | MligTC455_20351 | 1824 | 38 | Mlig455_019951, Mlig455_020022 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.144/0.00068 |
DDX17 | 1.741 | - | 0.784 | - | - | - | 0.957 | Mlig455_019951 {REF} {Length: 2463} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=162.7]; Helicase conserved C-terminal domain [PF00271.33, score=107.8]; Type III restriction enzyme, res subunit [PF04851.17, score=20.2]} {Human: ENSG00000100201, DDX17, DEAD-box helicase 17, [RH, Score=523, Expect=3e-179]; ENSG00000108654, DDX5, DEAD-box helicase 5, [RH, Score=517, Expect=2e-178]} {Mouse: ENSMUSG00000055065, Ddx17, DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, [RH, Score=523, Expect=1e-180]; ENSMUSG00000020719, Ddx5, DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, [RH, Score=515, Expect=5e-178]} {Dmel: FBgn0035720, CG10077, [RH, Score=504, Expect=3e-171]} {Celegans: WBGene00010260, ddx-17, DEAD boX helicase homolog, [RH, Score=462, Expect=3e-158]} {Smed: dd_Smed_v6_3743_0_2, dd_Smed_v6_3743_0_2, [RH, Score=525, Expect=0.0]} {RNA1509_4339, RNA1509_46098} {RNA1310_12456.1, RNA1509_46098} {RNA1509_46098, RNA815_4698} Mlig455_020022 {REF} {Length: 2509} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=163.3]; Helicase conserved C-terminal domain [PF00271.33, score=108.3]; Type III restriction enzyme, res subunit [PF04851.17, score=19.0]} {Human: ENSG00000100201, DDX17, DEAD-box helicase 17, [RH, Score=522, Expect=5e-179]; ENSG00000108654, DDX5, DEAD-box helicase 5, [RH, Score=517, Expect=1e-178]} {Mouse: ENSMUSG00000055065, Ddx17, DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, [RH, Score=523, Expect=2e-180]; ENSMUSG00000020719, Ddx5, DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, [RH, Score=516, Expect=2e-178]} {Dmel: FBgn0035720, CG10077, [RH, Score=503, Expect=8e-171]} {Celegans: WBGene00010260, ddx-17, DEAD boX helicase homolog, [RH, Score=464, Expect=4e-159]} {Smed: dd_Smed_v6_3743_0_2, dd_Smed_v6_3743_0_2, [RH, Score=527, Expect=0.0]} {RNA1509_4339} {RNA1310_12456.1} {RNA815_4698} |
15. | MligTC455_32550 | 924 | 19.24 | Mlig455_019608 | Neo: - Age: Down-Down-Up |
KAT8 | 1.722 | - | - | - | 0.763 | - | 0.959 | Mlig455_019608 {REF} {Length: 2694} {TRANSSPLICED} {Pfam: MOZ/SAS family [PF01853.20, score=270.3]} {Human: ENSG00000103510, KAT8, lysine acetyltransferase 8, [Score=299, Expect=2e-99]} {Mouse: ENSMUSG00000030801, Kat8, K(lysine) acetyltransferase 8, [Score=298, Expect=2e-99]} {Dmel: FBgn0014340, mof, males absent on the first, [Score=281, Expect=5e-89]} {Celegans: WBGene00010537, mys-2, Histone acetyltransferase, [Score=236, Expect=7e-75]} {Smed: dd_Smed_v6_10027_0_1, dd_Smed_v6_10027_0_1, [Score=288, Expect=3e-96]} {RNA1509_14301} {RNA1310_7249.1} {RNA815_4204.1} |
16. | MligTC455_20586 | 596 | 12.41 | Mlig455_016355 | Neo: Int S/G2/M Age: - |
GPS1 | 1.718 | - | - | - | 0.768 | - | 0.950 | Mlig455_016355 {REF} {Length: 2810} {TRANSSPLICED} {Pfam: 26S proteasome subunit RPN7 [PF10602.11, score=151.8]; PCI domain [PF01399.29, score=57.5]} {Human: ENSG00000169727, GPS1, G protein pathway suppressor 1, [RH, Score=400, Expect=6e-135]} {Mouse: ENSMUSG00000025156, Gps1, G protein pathway suppressor 1, [RH, Score=404, Expect=2e-136]} {Dmel: FBgn0027057, CSN1b, COP9 signalosome subunit 1b, [RH, Score=366, Expect=1e-121]} {Celegans: WBGene00000813, csn-1, COP9 signalosome complex subunit 1, [RH, Score=179, Expect=1e-49]} {Smed: dd_Smed_v6_2705_0_1, dd_Smed_v6_2705_0_1, [RH, Score=305, Expect=5e-98]} {RNA1509_36879, RNA1509_8713} {RNA1310_17431.1, RNA1509_36879, RNA1509_8713} {RNA1509_36879, RNA1509_8713, RNA815_5660} |
17. | MligTC455_20391 | 3465 | 72.19 | Mlig455_000953 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.069/0.00002 Regeneration-upregulated BL: 1.238 Regeneration-enriched BL: 1.238 |
RBBP4 | 1.706 | - | 0.754 | - | 0.952 | - | - | Mlig455_000953 {REF} {Length: 2522} {TRANSSPLICED} {Pfam: Histone-binding protein RBBP4 or subunit C of CAF1 complex [PF12265.10, score=97.9]; WD domain, G-beta repeat [PF00400.34, score=93.9]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=24.1]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.6]} {Human: ENSG00000162521, RBBP4, RB binding protein 4, chromatin remodeling factor, [RH, Score=758, Expect=0.0]; ENSG00000102054, RBBP7, RB binding protein 7, chromatin remodeling factor, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000057236, Rbbp4, retinoblastoma binding protein 4, chromatin remodeling factor, [RH, Score=758, Expect=0.0]; ENSMUSG00000031353, Rbbp7, retinoblastoma binding protein 7, chromatin remodeling factor, [RH, Score=726, Expect=0.0]} {Dmel: FBgn0263979, Caf1-55, Chromatin assembly factor 1, p55 subunit, [RH, Score=736, Expect=0.0]} {Celegans: WBGene00003036, lin-53, Probable histone-binding protein lin-53, [RH, Score=629, Expect=0.0]} {Smed: dd_Smed_v6_2065_0_1, dd_Smed_v6_2065_0_1, [RH, Score=711, Expect=0.0]} {RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447} {RNA1310_7929.2, RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447} {RNA1509_2959, RNA1509_44857, RNA1509_56911, RNA1509_58447, RNA815_2262.1} |
18. | MligTC455_12430 | 1324 | 27.59 | Mlig455_000502, Mlig455_024840 | Neo: Irradiation Age: logFC(26M/2M)=0.716 Region-enriched R5: 3.500/0.00000 |
ANKRD6 | 1.702 | 0.958 | - | - | - | 0.744 | - | Mlig455_000502 {REF} {Length: 2742} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=144.3]; Ankyrin repeats (many copies) [PF13857.8, score=127.1]; Ankyrin repeat [PF00023.32, score=108.2]; Ankyrin repeats (many copies) [PF13637.8, score=107.3]; Ankyrin repeat [PF13606.8, score=78.8]; GET complex subunit GET2 [PF08690.12, score=19.3]} {Human: ENSG00000135299, ANKRD6, ankyrin repeat domain 6, [Score=182, Expect=4e-48]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=180, Expect=1e-47]} {Dmel: FBgn0086898, dgo, diego, [Score=136, Expect=8e-33]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=125, Expect=4e-29]} {Smed: dd_Smed_v6_10764_0_3, dd_Smed_v6_10764_0_3, [Score=231, Expect=5e-67]} {RNA1509_54903, RNA1509_5896} {RNA1310_7062.1, RNA1509_54903} {RNA1509_54903, RNA815_9964} Mlig455_024840 {REF} {Length: 6621} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=144.2]; Ankyrin repeats (many copies) [PF13857.8, score=127.2]; Ankyrin repeat [PF00023.32, score=114.4]; Ankyrin repeats (many copies) [PF13637.8, score=104.0]; Ankyrin repeat [PF13606.8, score=81.8]; GET complex subunit GET2 [PF08690.12, score=19.3]} {Human: ENSG00000135299, ANKRD6, ankyrin repeat domain 6, [Score=178, Expect=5e-47]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=176, Expect=1e-46]} {Dmel: FBgn0086898, dgo, diego, [Score=133, Expect=8e-32]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=127, Expect=1e-29]} {Smed: dd_Smed_v6_10764_0_3, dd_Smed_v6_10764_0_3, [Score=236, Expect=9e-69]} {RNA1509_5896} {RNA1310_7062.1, RNA1509_5896} {RNA1509_5896, RNA815_9964} |
19. | MligTC455_50273 | 640 | 13.34 | Mlig455_027896 | Neo: Int S/G2/M Age: - |
PPIL1 | 0.974 | - | - | - | 0.974 | - | - | Mlig455_027896 {REF} {Length: 1834} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=183.0]} {Human: ENSG00000137168, PPIL1, peptidylprolyl isomerase like 1, [RH, Score=249, Expect=8e-86]} {Mouse: ENSMUSG00000024007, Ppil1, peptidylprolyl isomerase (cyclophilin)-like 1, [RH, Score=248, Expect=2e-85]} {Dmel: FBgn0035141, Cypl, Cyclophilin-like, [RH, Score=251, Expect=2e-86]} {Celegans: WBGene00000888, cyn-12, Peptidyl-prolyl cis-trans isomerase, [RH, Score=224, Expect=5e-76]} {Smed: dd_Smed_v6_5638_0_1, dd_Smed_v6_5638_0_1, [RH, Score=231, Expect=1e-78]} {RNA1509_26016, RNA1509_45468} {RNA1310_19931, RNA1509_26016, RNA1509_45468} {RNA1509_26016, RNA1509_45468, RNA815_9319.1} |
20. | MligTC455_09552 | 2324 | 48.42 | Mlig455_057928 | Neo: Neoblast, stringent Age: Down-Up-Up Regeneration-upregulated BL: 1.398 Regeneration-enriched BL: 1.398 |
FBL | 0.966 | - | - | - | 0.966 | - | - | Mlig455_057928 {REF} {Length: 2231} {TRANSSPLICED} {Pfam: Fibrillarin [PF01269.19, score=346.9]; tRNA methyltransferase complex GCD14 subunit [PF08704.12, score=24.9]} {Human: ENSG00000105202, FBL, fibrillarin, [RH, Score=353, Expect=7e-122]; ENSG00000280548, FBL, fibrillarin, [RH, Score=353, Expect=7e-122]; ENSG00000188573, FBLL1, fibrillarin like 1, [RH, Score=339, Expect=4e-116]} {Mouse: ENSMUSG00000051062, Fbll1, fibrillarin-like 1, [RH, Score=340, Expect=5e-117]} {Dmel: FBgn0003062, Fib, Fibrillarin, [RH, Score=359, Expect=4e-124]} {Celegans: WBGene00001423, fib-1, rRNA 2'-O-methyltransferase fibrillarin, [Score=342, Expect=3e-117]} {Smed: dd_Smed_v6_2811_0_1, dd_Smed_v6_2811_0_1, [RH, Score=316, Expect=3e-108]} {RNA1509_2653, RNA1509_2873} {RNA1310_19218, RNA1509_2653, RNA1509_2873} {RNA1509_2653, RNA1509_2873, RNA815_13797} |
21. | MligTC455_09553 | 2323 | 48.39 | Mlig455_057964 | Neo: Irradiation Age: logFC(26M/2M)=0.350 Regeneration-upregulated BL: 1.398 Regeneration-enriched BL: 1.398 |
FBL | 0.966 | - | - | - | 0.966 | - | - | Mlig455_057964 {REF} {Length: 1690} {TRANSSPLICED} {Pfam: Fibrillarin [PF01269.19, score=347.0]; tRNA methyltransferase complex GCD14 subunit [PF08704.12, score=25.1]} {Human: ENSG00000105202, FBL, fibrillarin, [RH, Score=352, Expect=2e-121]; ENSG00000280548, FBL, fibrillarin, [RH, Score=352, Expect=2e-121]; ENSG00000188573, FBLL1, fibrillarin like 1, [RH, Score=338, Expect=2e-115]} {Mouse: ENSMUSG00000046865, Fbl, fibrillarin, [RH, Score=353, Expect=1e-121]; ENSMUSG00000051062, Fbll1, fibrillarin-like 1, [RH, Score=340, Expect=1e-116]} {Dmel: FBgn0003062, Fib, Fibrillarin, [Score=361, Expect=1e-124]} {Celegans: WBGene00001423, fib-1, rRNA 2'-O-methyltransferase fibrillarin, [RH, Score=343, Expect=1e-117]} {Smed: dd_Smed_v6_2811_0_1, dd_Smed_v6_2811_0_1, [RH, Score=315, Expect=8e-108]} {RNA1509_2873} {RNA1310_21307} {RNA815_13797} |
22. | MligTC455_27292 | 3532 | 73.59 | Mlig455_040525 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.300 Regeneration-enriched BL: 1.630 |
DEK | 0.96 | - | - | - | 0.960 | - | - | Mlig455_040525 {REF} {Length: 2029} {TRANSSPLICED} {Pfam: DEK C terminal domain [PF08766.13, score=46.8]} {Human: ENSG00000124795, DEK, DEK proto-oncogene, [RH, Score=84.7, Expect=3e-17]} {Mouse: ENSMUSG00000021377, Dek, DEK oncogene (DNA binding), [RH, Score=91.3, Expect=6e-21]} {Dmel: FBgn0026533, Dek, [RH, Score=60.5, Expect=2e-09]} {RNA1509_16091, RNA1509_23683, RNA1509_3429, RNA1509_51680, RNA1509_57384} {RNA1310_12184, RNA1509_16091, RNA1509_23683, RNA1509_3429, RNA1509_51680, RNA1509_57384} {RNA1509_16091, RNA1509_23683, RNA1509_3429, RNA1509_51680, RNA1509_57384, RNA815_16871} |
23. | MligTC455_28596 | 52 | 1.08 | Mlig455_039629 | Neo: - Age: - |
0.958 | - | - | - | 0.958 | - | - | Mlig455_039629 {REF} {Length: 1244} {Pfam: Integrase core domain [PF00665.28, score=31.2]} {Smed: dd_Smed_v6_11155_0_2, dd_Smed_v6_11155_0_2, [Score=58.2, Expect=2e-10]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1} | |
24. | MligTC455_27291 | 3494 | 72.8 | Mlig455_040513 | Neo: Irradiation Age: logFC(26M/2M)=0.341 Regeneration-enriched BL: 1.592 |
DEK | 0.957 | - | - | - | 0.957 | - | - | Mlig455_040513 {REF} {Length: 2092} {Pfam: DEK C terminal domain [PF08766.13, score=46.1]} {Human: ENSG00000124795, DEK, DEK proto-oncogene, [RH, Score=84.3, Expect=4e-17]} {Mouse: ENSMUSG00000021377, Dek, DEK oncogene (DNA binding), [RH, Score=91.3, Expect=8e-21]} {Dmel: FBgn0026533, Dek, [RH, Score=59.7, Expect=3e-09]} {RNA1509_16418, RNA1509_3429} {RNA1310_12184, RNA1509_16418} {RNA1509_16418, RNA815_16871} |
25. | MligTC455_41070 | 310 | 6.46 | Mlig455_047644 | Neo: Irradiation Age: Down-Up-Down |
0.955 | - | - | - | 0.955 | - | - | Mlig455_047644 {REF} {Length: 3607} {RNA1509_22396, RNA1509_50089} {RNA1310_14148.1, RNA1509_22396, RNA1509_50089} {RNA1509_22396, RNA1509_50089, RNA815_10177} | |
26. | MligTC455_21027 | 1167 | 24.32 | Mlig455_019739 | Neo: - Age: logFC(26M/2M)=-0.527 |
MEX3B | 0.954 | - | - | - | 0.954 | - | - | Mlig455_019739 {REF} {Length: 2452} {Pfam: KH domain [PF00013.31, score=72.2]; NusA-like KH domain [PF13184.8, score=22.6]; KH domain [PF07650.19, score=20.4]; KH domain [PF13083.8, score=20.2]} {Human: ENSG00000183496, MEX3B, mex-3 RNA binding family member B, [RH, Score=112, Expect=9e-27]; ENSG00000176624, MEX3C, mex-3 RNA binding family member C, [RH, Score=110, Expect=8e-26]} {Mouse: ENSMUSG00000057706, Mex3b, mex3 RNA binding family member B, [RH, Score=112, Expect=6e-27]; ENSMUSG00000037253, Mex3c, mex3 RNA binding family member C, [RH, Score=110, Expect=4e-26]} {Dmel: FBgn0039920, CG11360, [Score=101, Expect=5e-23]} {Celegans: WBGene00003229, mex-3, Muscle EXcess, [Score=108, Expect=3e-26]} {Smed: dd_Smed_v6_1999_0_1, dd_Smed_v6_1999_0_1, [RH, Score=70.5, Expect=4e-13]} {RNA1509_6767} {RNA1310_9378} {RNA815_11633.1} |
27. | MligTC455_51351 | 116 | 2.43 | Mlig455_040920 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.585 Region-enriched R4: 3.203/0.00816 |
HIST4H4 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_040920 {REF} {Length: 1614} {Pfam: Centromere kinetochore component CENP-T histone fold [PF15511.8, score=33.4]; TATA box binding protein associated factor (TAF) [PF02969.19, score=25.4]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=23.3]; CENP-S protein [PF15630.8, score=23.3]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.2]} {Human: ENSG00000197837, HIST4H4, histone cluster 4 H4, [RH, Score=199, Expect=1e-67]; ENSG00000274618, HIST1H4F, histone cluster 1 H4 family member f, [RH, Score=199, Expect=1e-67]; ENSG00000197238, HIST1H4J, histone cluster 1 H4 family member j, [RH, Score=199, Expect=1e-67]; ENSG00000270882, HIST2H4A, histone cluster 2 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000276180, HIST1H4I, histone cluster 1 H4 family member i, [RH, Score=199, Expect=1e-67]; ENSG00000158406, HIST1H4H, histone cluster 1 H4 family member h, [RH, Score=199, Expect=1e-67]; ENSG00000276966, HIST1H4E, histone cluster 1 H4 family member e, [RH, Score=199, Expect=1e-67]; ENSG00000273542, HIST1H4K, histone cluster 1 H4 family member k, [RH, Score=199, Expect=1e-67]; ENSG00000278637, HIST1H4A, histone cluster 1 H4 family member a, [RH, Score=199, Expect=1e-67]; ENSG00000275126, HIST1H4L, histone cluster 1 H4 family member l, [RH, Score=199, Expect=1e-67]; ENSG00000277157, HIST1H4D, histone cluster 1 H4 family member d, [RH, Score=199, Expect=1e-67]; ENSG00000197061, HIST1H4C, histone cluster 1 H4 family member c, [RH, Score=199, Expect=1e-67]; ENSG00000278705, HIST1H4B, histone cluster 1 H4 family member b, [RH, Score=199, Expect=1e-67]; ENSG00000270276, HIST2H4B, histone cluster 2 H4 family member b, [RH, Score=199, Expect=1e-67]} {Mouse: ENSMUSG00000061482, Hist1h4d, histone cluster 1, H4d, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060639, Hist1h4i, histone cluster 1, H4i, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069266, Hist1h4b, histone cluster 1, H4b, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060981, Hist1h4h, histone cluster 1, H4h, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069306, Hist1h4m, histone cluster 1, H4m, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060678, Hist1h4c, histone cluster 1, H4c, [RH, Score=199, Expect=1e-67]; ENSMUSG00000091405, Hist2h4, histone cluster 2, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000096010, Hist4h4, histone cluster 4, H4, [RH, Score=199, Expect=1e-67]; ENSMUSG00000064288, Hist1h4k, histone cluster 1, H4k, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069274, Hist1h4f, histone cluster 1, H4f, [RH, Score=199, Expect=1e-67]; ENSMUSG00000060093, Hist1h4a, histone cluster 1, H4a, [RH, Score=199, Expect=1e-67]; ENSMUSG00000067455, Hist1h4j, histone cluster 1, H4j, [RH, Score=199, Expect=1e-67]; ENSMUSG00000069305, Hist1h4n, histone cluster 1, H4n, [RH, Score=199, Expect=1e-67]} {Dmel: FBgn0013981, His4r, Histone H4 replacement, [RH, Score=197, Expect=2e-67]} {Celegans: WBGene00001920, his-46, Histone H4, [RH, Score=197, Expect=3e-67]} {Smed: dd_Smed_v6_5700_0_1, dd_Smed_v6_5700_0_1, [RH, Score=199, Expect=4e-68]} {RNA1509_21430} {RNA1310_47788.1} {RNA815_23950.1} |
28. | MligTC455_36666 | 222 | 4.63 | Mlig455_008425 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_008425 {REF} {Length: 1550} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=111.3]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=62.0, Expect=1e-10]} {RNA1509_57500} {RNA1310_38108} {RNA815_17993} |