M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_00517

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_00517 14 0.30 Mlig455_030063

Neo: -

Age: -

Regeneration-enriched R4: 7.437
Regeneration-enriched R3: 7.435
Regeneration-enriched R6: 7.315

 Mlig455_030063 {REF} {Length: 1513} {RNA1509_5594} {RNA1310_99804} {RNA815_59053.1}

Cumulative graph for MligTC455_00517

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -9.531 0.702 0.99964 1.00000
RegionR2 6.878 0.702 0.99983 1.00000
RegionR3 1.723 0.702 0.99993 1.00000
RegionR4 -5.618 0.702 0.99980 1.00000
RegionR5 2.979 0.702 0.13359 0.37286
RegionR6 1.648 0.702 0.99996 1.00000
RegionR7 0.651 0.702 0.99991 1.00000
RegionR8 1.271 0.702 0.99993 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 9.779 0.702 0.99991 1.00000
RegenerationR2 2.885 0.702 0.01778 0.21900
RegenerationR3 7.435 0.702 0.00002 0.00429
RegenerationR4 7.437 0.702 0.00005 0.00393
RegenerationR5 3.252 0.702 0.00127 0.05965
RegenerationR6 7.315 0.702 0.00003 0.00454
RegenerationBL 3.742 0.702 0.40840 0.77754
RegenerationTP 7.462 0.702 0.00038 0.02675


Genes with expression patterns similar to MligTC455_00517

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_00517 14 0.3 Mlig455_030063

Neo: -

Age: -

Regeneration-enriched R4: 7.437
Regeneration-enriched R3: 7.435
Regeneration-enriched R6: 7.315

 2 - - - - 1.000 1.000 Mlig455_030063 {REF} {Length: 1513} {RNA1509_5594} {RNA1310_99804} {RNA815_59053.1}
2. MligTC455_40990 33 0.69 Mlig455_028229

Neo: -

Age: -

 1.853 - - - - 0.956 0.897 Mlig455_028229 {REF} {Length: 910} {NoTransDecoderORF} {RNA1509_31256} {RNA1310_2177} {RNA815_2763.1}
3. MligTC455_31207 43 0.9 Mlig455_002822

Neo: -

Age: -

 0.982 - - - - 0.982 - Mlig455_002822 {REF} {Length: 1058} {Smed: dd_Smed_v6_91651_0_1, dd_Smed_v6_91651_0_1, [Score=50.4, Expect=2e-08]} {RNA1310_66267} {RNA815_45185}
4. MligTC455_31216 103 2.15 Mlig455_007970, Mlig455_033836

Neo: -

Age: -

 0.982 - - - - 0.982 -

Mlig455_007970 {REF} {Length: 4393} {RNA1509_47848} {RNA1310_23510} {RNA815_21831}

Mlig455_033836 {REF} {Length: 7022} {RNA1509_51255} {RNA1310_40336.1} {RNA815_39433}
5. MligTC455_48921 282 5.87 Mlig455_029707

Neo: Int S/G2/M

Age: -

 0.981 - - - - 0.981 - Mlig455_029707 {REF} {Length: 292} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_50538.2} {RNA815_19005.1}
6. MligTC455_07051 26 0.54 Mlig455_024162, Mlig455_047642

Neo: -

Age: -

 0.976 - - - - 0.976 -

Mlig455_024162 {REF} {Length: 2495} {Pfam: SET domain [PF00856.30, score=35.1]; C2H2-type zinc-finger domain [PF13909.8, score=22.1]} {RNA1310_131883} {RNA815_45891}

Mlig455_047642 {REF} {Length: 799} {RNA1310_131883}
7. MligTC455_18527 360 7.5 Mlig455_012969, Mlig455_028760, Mlig455_033181, Mlig455_046334

Neo: -

Age: -

 0.976 - - - - - 0.976

Mlig455_012969 {REF} {Length: 8607} {TRANSSPLICED} {Pfam: Sarcoglycan complex subunit protein [PF04790.15, score=23.1]; U11-48K-like CHHC zinc finger [PF05253.14, score=21.1]} {RNA1509_4266} {RNA1310_7216} {RNA815_4504}

Mlig455_028760 {REF} {Length: 4445} {TRANSSPLICED} {Pfam: Sarcoglycan complex subunit protein [PF04790.15, score=23.1]; U11-48K-like CHHC zinc finger [PF05253.14, score=21.1]} {RNA1509_4266} {RNA1310_7216} {RNA815_4504}

Mlig455_033181 {REF} {Length: 5163} {TRANSSPLICED} {Pfam: Sarcoglycan complex subunit protein [PF04790.15, score=23.1]; U11-48K-like CHHC zinc finger [PF05253.14, score=21.1]} {RNA1509_4266} {RNA1310_7216} {RNA815_4504}

Mlig455_046334 {REF} {Length: 4445} {TRANSSPLICED} {Pfam: Sarcoglycan complex subunit protein [PF04790.15, score=23.1]; U11-48K-like CHHC zinc finger [PF05253.14, score=21.1]} {RNA1509_4266} {RNA1310_7216} {RNA815_4504}
8. MligTC455_52981 216 4.5 Mlig455_040266, Mlig455_040275

Neo: -

Age: -

 IPMK 0.976 - - - - 0.976 -

Mlig455_040266 {REF} {Length: 2596} {Pfam: Inositol polyphosphate kinase [PF03770.18, score=138.2]} {Human: ENSG00000151151, IPMK, inositol polyphosphate multikinase, [RH, Score=127, Expect=3e-32]} {Mouse: ENSMUSG00000060733, Ipmk, inositol polyphosphate multikinase, [Score=120, Expect=7e-30]} {Dmel: FBgn0031267, Ipk2, [Score=105, Expect=4e-25]} {Celegans: WBGene00009262, F30A10.3, Kinase, [RH, Score=66.2, Expect=9e-12]} {Smed: dd_Smed_v6_3701_0_1, dd_Smed_v6_3701_0_1, [Score=129, Expect=2e-34]} {RNA1509_12297} {RNA1310_12275} {RNA815_4311}

Mlig455_040275 {REF} {Length: 2517} {Pfam: Inositol polyphosphate kinase [PF03770.18, score=138.7]} {Human: ENSG00000151151, IPMK, inositol polyphosphate multikinase, [Score=119, Expect=1e-29]} {Mouse: ENSMUSG00000060733, Ipmk, inositol polyphosphate multikinase, [Score=119, Expect=3e-30]} {Dmel: FBgn0031267, Ipk2, [Score=99.8, Expect=1e-23]} {Celegans: WBGene00009262, F30A10.3, Kinase, [RH, Score=65.1, Expect=1e-11]} {Smed: dd_Smed_v6_3701_0_1, dd_Smed_v6_3701_0_1, [Score=117, Expect=1e-30]} {RNA1509_12297, RNA1509_57864} {RNA1310_13642, RNA1509_57864} {RNA1509_57864, RNA815_4311}
9. MligTC455_26433 15 0.31 Mlig455_013559

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_013559 {REF} {Length: 1067} {NoTransDecoderORF} {RNA1509_38155} {RNA1310_16376} {RNA815_12881}
10. MligTC455_36760 17 0.36 Mlig455_055646

Neo: -

Age: -

 HSPA1L 0.975 - - - - - 0.975 Mlig455_055646 {REF} {Length: 2399} {Pfam: Hsp70 protein [PF00012.22, score=812.0]; MreB/Mbl protein [PF06723.15, score=61.2]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=23.0]} {Human: ENSG00000236251, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=913, Expect=0.0]; ENSG00000206383, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=913, Expect=0.0]; ENSG00000226704, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=913, Expect=0.0]; ENSG00000204390, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=912, Expect=0.0]; ENSG00000234258, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=912, Expect=0.0]; ENSG00000109971, HSPA8, heat shock protein family A (Hsp70) member 8, [Score=907, Expect=0.0]; ENSG00000126803, HSPA2, heat shock protein family A (Hsp70) member 2, [Score=903, Expect=0.0]; ENSG00000212866, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=897, Expect=0.0]; ENSG00000232804, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=897, Expect=0.0]; ENSG00000235941, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=897, Expect=0.0]; ENSG00000237724, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=897, Expect=0.0]; ENSG00000224501, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=897, Expect=0.0]; ENSG00000231555, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=897, Expect=0.0]; ENSG00000234475, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=897, Expect=0.0]; ENSG00000204389, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=897, Expect=0.0]; ENSG00000204388, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=897, Expect=0.0]; ENSG00000215328, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=896, Expect=0.0]; ENSG00000173110, HSPA6, heat shock protein family A (Hsp70) member 6, [Score=889, Expect=0.0]} {Mouse: ENSMUSG00000007033, Hspa1l, heat shock protein 1-like, [Score=926, Expect=0.0]; ENSMUSG00000015656, Hspa8, heat shock protein 8, [Score=914, Expect=0.0]; ENSMUSG00000090877, Hspa1b, heat shock protein 1B, [Score=912, Expect=0.0]; ENSMUSG00000091971, Hspa1a, heat shock protein 1A, [Score=912, Expect=0.0]; ENSMUSG00000059970, Hspa2, heat shock protein 2, [Score=900, Expect=0.0]} {Dmel: FBgn0001217, Hsc70-2, Heat shock protein cognate 2, [Score=881, Expect=0.0]} {Celegans: WBGene00002005, hsp-1, Heat shock 70 kDa protein A, [Score=894, Expect=0.0]} {Smed: dd_Smed_v6_2221_0_1, dd_Smed_v6_2221_0_1, [Score=890, Expect=0.0]} {RNA1509_51127} {RNA1310_35263.1} {RNA815_20687.1}
11. MligTC455_39853 307 6.39 Mlig455_035859

Neo: -

Age: -

Region-enriched R6: 4.628/0.00000
Region-enriched R7: 3.113/0.00676

Regeneration-downregulated BL: -5.086

Regeneration-depleted BL: -5.086

 0.974 - - - - 0.974 - Mlig455_035859 {REF} {Length: 1893} {Pfam: Alphaherpesvirus glycoprotein E [PF02480.18, score=23.1]; Transmembrane protein 51 [PF15345.8, score=20.9]; Transmembrane 52 [PF14979.8, score=20.0]; FAM176 family [PF14851.8, score=19.2]} {RNA1310_29513} {RNA815_14781}
12. MligTC455_06646 23 0.47 Mlig455_052044

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_052044 {REF} {Length: 737}
13. MligTC455_08237 7 0.15 Mlig455_032716

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_032716 {REF} {Length: 497} {NoTransDecoderORF} {RNA1310_85843}
14. MligTC455_47334 21 0.43 Mlig455_025941

Neo: -

Age: -

 DSTYK 0.97 - - - - 0.970 - Mlig455_025941 {REF} {Length: 2677} {Pfam: Dynamin family [PF00350.25, score=63.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=59.5]; Protein kinase domain [PF00069.27, score=53.5]; 50S ribosome-binding GTPase [PF01926.25, score=26.8]} {Human: ENSG00000133059, DSTYK, dual serine/threonine and tyrosine protein kinase, [Score=99.8, Expect=8e-21]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=102, Expect=5e-22]} {Dmel: FBgn0000826, png, pan gu, [Score=58.5, Expect=7e-09]} {Celegans: WBGene00002193, kin-5, Tyrosine-protein kinase, [Score=59.7, Expect=6e-09]} {Smed: dd_Smed_v6_1371_0_1, dd_Smed_v6_1371_0_1, [Score=160, Expect=2e-40]} {RNA1509_27256} {RNA1310_2101.1} {RNA815_1104.2}
15. MligTC455_06328 144 3 Mlig455_044820

Neo: -

Age: Down-Down-Up

Region-enriched R8: 2.752/0.01310

Regeneration-downregulated BL: -7.394

Regeneration-depleted BL: -7.394

 NOTCH4 0.968 - - - - 0.968 - Mlig455_044820 {REF} {Length: 2669} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=37.2]; Human growth factor-like EGF [PF12661.9, score=29.7]; EGF-like domain [PF07974.15, score=19.8]} {Human: ENSG00000234876, NOTCH4, notch 4, [Score=105, Expect=1e-22]; ENSG00000204301, NOTCH4, notch 4, [Score=105, Expect=1e-22]; ENSG00000235396, NOTCH4, notch 4, [Score=105, Expect=1e-22]; ENSG00000223355, NOTCH4, notch 4, [Score=105, Expect=1e-22]; ENSG00000206312, NOTCH4, notch 4, [Score=105, Expect=1e-22]; ENSG00000232339, NOTCH4, notch 4, [Score=105, Expect=1e-22]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=104, Expect=3e-22]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=92.4, Expect=1e-18]; ENSMUSG00000027878, Notch2, notch 2, [Score=90.1, Expect=6e-18]; ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=89.7, Expect=7e-18]} {Dmel: FBgn0051665, wry, weary, [Score=115, Expect=3e-26]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=84.0, Expect=3e-16]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=107, Expect=1e-23]} {RNA1509_13430} {RNA1310_7596.1} {RNA815_13746}
16. MligTC455_40586 16 0.33 Mlig455_069787

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_069787 {REF} {Length: 931} {NoTransDecoderORF} {RNA1310_29562} {RNA815_33075}
17. MligTC455_45713 66 1.38 Mlig455_039432

Neo: -

Age: Up-Down-Up

 0.967 - - - - 0.967 - Mlig455_039432 {REF} {Length: 2393} {TRANSSPLICED} {RNA1509_58805} {RNA1310_59132} {RNA815_31237}
18. MligTC455_53154 84 1.74 Mlig455_043500

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_043500 {REF} {Length: 1914} {RNA1509_42280} {RNA1310_99128} {RNA815_61343}
19. MligTC455_03042 13 0.27 Mlig455_061930

Neo: -

Age: Down-Up-Up

 0.966 - - - - 0.966 - Mlig455_061930 {REF} {Length: 1439} {RNA1509_28149} {RNA1310_13368} {RNA815_4817.1}
20. MligTC455_07109 22 0.46 Mlig455_044529

Neo: -

Age: -

Regeneration-upregulated R6: 7.106

Regeneration-enriched R6: 7.106

 0.966 - - - - - 0.966 Mlig455_044529 {REF} {Length: 713} {NoTransDecoderORF} {RNA1310_63565}
21. MligTC455_21078 32 0.67 Mlig455_002675

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_002675 {REF} {Length: 3968} {NoTransDecoderORF} {RNA1509_49659} {RNA1310_88461} {RNA815_62212}
22. MligTC455_26047 280 5.83 Mlig455_061668

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_061668 {REF} {Length: 1740} {NoTransDecoderORF} {RNA1509_47332} {RNA1310_41891, RNA1509_47332} {RNA1509_47332, RNA815_20265.1}
23. MligTC455_00430 7 0.15 Mlig455_007037

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_007037 {REF} {Length: 320} {NoTransDecoderORF} {RNA1509_34772} {RNA1310_63289} {RNA815_33097}
24. MligTC455_07534 19 0.39 Mlig455_064907

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_064907 {REF} {Length: 220} {NoTransDecoderORF}
25. MligTC455_11873 182 3.8 Mlig455_064533

Neo: -

Age: -

Region-enriched R7: 6.862/0.00000
Region-enriched R8: 5.801/0.00001
Region-enriched R6: 4.321/0.00002

 TBX20 0.963 - - - - 0.963 - Mlig455_064533 {REF} {Length: 2157} {Pfam: T-box [PF00907.24, score=229.4]} {Human: ENSG00000164532, TBX20, T-box 20, [Score=259, Expect=6e-82]} {Mouse: ENSMUSG00000031965, Tbx20, T-box 20, [Score=259, Expect=3e-84]} {Dmel: FBgn0261963, mid, midline, [Score=254, Expect=1e-78]} {Celegans: WBGene00003106, mab-9, T-box protein 12, [Score=228, Expect=2e-71]} {Smed: dd_Smed_v6_19890_0_1, dd_Smed_v6_19890_0_1, [Score=259, Expect=6e-81]} {RNA1509_38966} {RNA1310_30620} {RNA815_7293.1}
26. MligTC455_33410 173 3.6 Mlig455_025792

Neo: -

Age: Down-Up-Up

 MED17 0.963 - - - - 0.963 - Mlig455_025792 {REF} {Length: 2790} {TRANSSPLICED} {Human: ENSG00000042429, MED17, mediator complex subunit 17, [RH, Score=116, Expect=1e-26]} {Mouse: ENSMUSG00000031935, Med17, mediator complex subunit 17, [RH, Score=122, Expect=1e-28]} {Dmel: FBgn0038578, MED17, Mediator complex subunit 17, [RH, Score=129, Expect=3e-31]} {Smed: dd_Smed_v6_9246_0_1, dd_Smed_v6_9246_0_1, [RH, Score=77.8, Expect=6e-15]} {RNA1509_27661, RNA1509_49945} {RNA1310_8043, RNA1509_27661, RNA1509_49945} {RNA1509_27661, RNA1509_49945, RNA815_13772}
27. MligTC455_14460 40 0.83 Mlig455_029779

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.445

 TRPM7 0.962 - - - - 0.962 - Mlig455_029779 {REF} {Length: 2359} {Pfam: Alpha-kinase family [PF02816.20, score=137.7]; von Willebrand factor type A domain [PF13519.8, score=32.5]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=69.7, Expect=1e-11]; ENSG00000119121, TRPM6, transient receptor potential cation channel subfamily M member 6, [Score=69.7, Expect=9e-12]} {Mouse: ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=69.7, Expect=6e-12]; ENSMUSG00000024727, Trpm6, transient receptor potential cation channel, subfamily M, member 6, [Score=66.6, Expect=5e-11]} {Celegans: WBGene00001160, efk-1, Eukaryotic elongation factor 2 kinase, [Score=50.1, Expect=3e-06]} {Smed: dd_Smed_v6_2226_1_1, dd_Smed_v6_2226_1_1, [Score=54.7, Expect=9e-08]} {RNA1509_4148} {RNA1310_6638.1} {RNA815_3624}
28. MligTC455_54448 21 0.44 Mlig455_013024

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_013024 {REF} {Length: 486} {RNA1509_42416} {RNA1310_122120}
29. MligTC455_07545 14 0.29 Mlig455_001083

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_001083 {REF} {Length: 859} {NoTransDecoderORF} {RNA1509_51478} {RNA1310_121350} {RNA815_4833.2}
30. MligTC455_09806 44 0.93 Mlig455_003652

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_003652 {REF} {Length: 1406} {NoTransDecoderORF} {RNA1509_26670} {RNA1310_1274.1} {RNA815_63692}
31. MligTC455_49994 56 1.18 Mlig455_064693

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_064693 {REF} {Length: 969} {NoTransDecoderORF} {RNA1310_116104}
32. MligTC455_51613 49 1.03 Mlig455_036759

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_036759 {REF} {Length: 427} {NoTransDecoderORF} {RNA1509_45539} {RNA1310_120300.2} {RNA815_29511.1}
33. MligTC455_00092 8 0.17 Mlig455_002951

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_002951 {REF} {Length: 188} {NoTransDecoderORF}
34. MligTC455_07523 37 0.76 Mlig455_009295

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_009295 {REF} {Length: 527} {NoTransDecoderORF} {RNA1509_54671} {RNA1310_20601} {RNA815_6311.1}
35. MligTC455_26942 8 0.16 Mlig455_014636, Mlig455_014715

Neo: -

Age: Up-Down-Up

 ANK2 0.96 - - - - - 0.960

Mlig455_014636 {REF} {Length: 4273} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=146.2]; Ankyrin repeat [PF00023.32, score=113.5]; Ankyrin repeats (many copies) [PF13637.8, score=107.9]; Ankyrin repeat [PF13606.8, score=103.5]; Ankyrin repeats (many copies) [PF13857.8, score=81.5]; Mab-21 protein [PF03281.16, score=18.9]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=162, Expect=9e-40]; ENSG00000151150, ANK3, ankyrin 3, [Score=158, Expect=2e-38]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=159, Expect=7e-39]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=158, Expect=1e-38]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=160, Expect=9e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=176, Expect=1e-44]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=154, Expect=3e-39]} {RNA1509_19588} {RNA1310_2850.1} {RNA815_2885.2}

Mlig455_014715 {REF} {Length: 4965} {Pfam: Mab-21 protein [PF03281.16, score=20.4]} {RNA1509_19588} {RNA1310_2850.1} {RNA815_2885.2}
36. MligTC455_28655 49 1.03 Mlig455_048319

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.727

 RNF213 0.96 - - - - 0.960 - Mlig455_048319 {REF} {Length: 12875} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=25.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=23.1]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=329, Expect=5e-89]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=319, Expect=3e-86]} {RNA1509_30363} {RNA1310_550} {RNA815_15}
37. MligTC455_35511 2685 55.94 Mlig455_028291

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_028291 {REF} {Length: 1495} {RNA1509_42313, RNA1509_7021} {RNA1310_28853, RNA1509_42313, RNA1509_7021} {RNA1509_42313, RNA1509_7021, RNA815_13425.1}
38. MligTC455_11257 114 2.38 Mlig455_001713

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_001713 {REF} {Length: 620} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_27830} {RNA815_13308}
39. MligTC455_32777 48 0.99 Mlig455_028676

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_028676 {REF} {Length: 869} {RNA1509_31677} {RNA1310_82986}
40. MligTC455_52042 46 0.95 Mlig455_003120

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_003120 {REF} {Length: 1626} {NoTransDecoderORF} {RNA1310_59659} {RNA815_5685.11}
41. MligTC455_42849 4989 103.94 Mlig455_003538

Neo: -

Age: -

 UBE2D1 0.956 - - - - 0.956 - Mlig455_003538 {REF} {Length: 1271} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=177.7]; RWD domain [PF05773.24, score=19.2]} {Human: ENSG00000072401, UBE2D1, ubiquitin conjugating enzyme E2 D1, [Score=220, Expect=2e-74]; ENSG00000131508, UBE2D2, ubiquitin conjugating enzyme E2 D2, [Score=216, Expect=6e-73]; ENSG00000078967, UBE2D4, ubiquitin conjugating enzyme E2 D4 (putative), [Score=215, Expect=1e-72]; ENSG00000109332, UBE2D3, ubiquitin conjugating enzyme E2 D3, [Score=214, Expect=3e-72]} {Mouse: ENSMUSG00000019927, Ube2d1, ubiquitin-conjugating enzyme E2D 1, [Score=220, Expect=1e-74]; ENSMUSG00000091896, Ube2d2a, ubiquitin-conjugating enzyme E2D 2A, [Score=216, Expect=4e-73]; ENSMUSG00000078578, Ube2d3, ubiquitin-conjugating enzyme E2D 3, [Score=214, Expect=2e-72]; ENSMUSG00000063447, Ube2d2b, ubiquitin-conjugating enzyme E2D 2B, [Score=210, Expect=8e-71]} {Dmel: FBgn0011217, eff, effete, [Score=218, Expect=3e-74]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=215, Expect=3e-73]} {Smed: dd_Smed_v6_153_0_1, dd_Smed_v6_153_0_1, [Score=207, Expect=3e-70]} {RNA1509_10716, RNA1509_21638, RNA1509_30081, RNA1509_59836} {RNA1310_17733.1, RNA1509_10716, RNA1509_21638, RNA1509_30081, RNA1509_59836} {RNA1509_10716, RNA1509_21638, RNA1509_30081, RNA1509_59836, RNA815_7954.1}
42. MligTC455_46660 319 6.65 Mlig455_029098, Mlig455_029118

Neo: -

Age: -

 TPCN1 0.956 - - - - 0.956 -

Mlig455_029098 {REF} {Length: 3236} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=111.5]} {Human: ENSG00000186815, TPCN1, two pore segment channel 1, [Score=167, Expect=2e-42]} {Mouse: ENSMUSG00000032741, Tpcn1, two pore channel 1, [Score=176, Expect=5e-46]} {Dmel: FBgn0085434, NaCP60E, Na channel protein 60E, [Score=65.5, Expect=1e-10]} {Celegans: WBGene00006742, unc-2, High voltage activated calcium channel alpha-1 subunit, [Score=53.1, Expect=7e-07]} {Smed: dd_Smed_v6_8333_0_1, dd_Smed_v6_8333_0_1, [Score=169, Expect=6e-44]} {RNA1509_51248} {RNA1310_6971.3} {RNA815_6160}

Mlig455_029118 {REF} {Length: 3351} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=165.9]} {Human: ENSG00000186815, TPCN1, two pore segment channel 1, [RH, Score=197, Expect=2e-52]} {Mouse: ENSMUSG00000032741, Tpcn1, two pore channel 1, [RH, Score=207, Expect=5e-56]} {Dmel: FBgn0001991, Ca-alpha1D, Ca[2+]-channel protein alpha[[1]] subunit D, [Score=73.6, Expect=6e-13]} {Celegans: WBGene00006742, unc-2, High voltage activated calcium channel alpha-1 subunit, [Score=67.4, Expect=3e-11]} {Smed: dd_Smed_v6_8333_0_1, dd_Smed_v6_8333_0_1, [RH, Score=229, Expect=2e-64]} {RNA1509_51248} {RNA1310_6971.1, RNA1509_51248} {RNA1509_51248, RNA815_6160}
43. MligTC455_42296 21 0.44 Mlig455_053339

Neo: -

Age: -

 PIP5K1A 0.955 - - - - 0.955 - Mlig455_053339 {REF} {Length: 2073} {TRANSSPLICED} {Pfam: Phosphatidylinositol-4-phosphate 5-Kinase [PF01504.20, score=268.3]} {Human: ENSG00000143398, PIP5K1A, phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, [RH, Score=417, Expect=9e-140]} {Mouse: ENSMUSG00000034902, Pip5k1c, phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma, [RH, Score=409, Expect=5e-136]} {Dmel: FBgn0016984, sktl, skittles, [Score=435, Expect=2e-144]} {Celegans: WBGene00004087, ppk-1, PIP Kinase, [Score=409, Expect=1e-136]} {Smed: dd_Smed_v6_7632_0_3, dd_Smed_v6_7632_0_3, [Score=414, Expect=8e-140]} {RNA1509_26123} {RNA1310_25286.1} {RNA815_4999.1}
44. MligTC455_08858 195 4.07 Mlig455_058112

Neo: -

Age: -

Regeneration-enriched R5: 4.501
Regeneration-enriched R6: 4.064

 0.953 - - - - 0.953 - Mlig455_058112 {REF} {Length: 1662} {RNA1509_26637} {RNA1310_27547} {RNA815_16487}
45. MligTC455_30074 224 4.67 Mlig455_010726

Neo: Int S/G2/M

Age: -

 MCM6 0.953 - - - - 0.953 - Mlig455_010726 {REF} {Length: 5430} {Pfam: MCM P-loop domain [PF00493.25, score=325.2]; MCM OB domain [PF17207.5, score=124.3]; MCM6 C-terminal winged-helix domain [PF18263.3, score=96.2]; MCM AAA-lid domain [PF17855.3, score=87.7]; MCM N-terminal domain [PF14551.8, score=60.7]; Magnesium chelatase, subunit ChlI [PF01078.23, score=31.9]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=25.0]; AAA domain (dynein-related subfamily) [PF07728.16, score=20.5]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.4]; Sigma-54 interaction domain [PF00158.28, score=18.9]} {Human: ENSG00000076003, MCM6, minichromosome maintenance complex component 6, [RH, Score=879, Expect=0.0]} {Mouse: ENSMUSG00000026355, Mcm6, minichromosome maintenance complex component 6, [RH, Score=868, Expect=0.0]} {Dmel: FBgn0025815, Mcm6, Minichromosome maintenance 6, [RH, Score=852, Expect=0.0]} {Celegans: WBGene00003158, mcm-6, DNA replication licensing factor mcm-6, [RH, Score=747, Expect=0.0]} {Smed: dd_Smed_v6_2682_0_1, dd_Smed_v6_2682_0_1, [RH, Score=769, Expect=0.0]} {RNA1509_4924} {RNA1310_1781.1} {RNA815_909}
46. MligTC455_31185 18 0.37 Mlig455_044975

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_044975 {REF} {Length: 682} {RNA1509_38155} {RNA1310_23095} {RNA815_12881}
47. MligTC455_35357 192 4 Mlig455_063125

Neo: -

Age: -

 PNP 0.953 - - - - 0.953 - Mlig455_063125 {REF} {Length: 2364} {TRANSSPLICED} {Pfam: Phosphorylase superfamily [PF01048.22, score=153.4]} {Human: ENSG00000198805, PNP, purine nucleoside phosphorylase, [RH, Score=322, Expect=1e-110]} {Mouse: ENSMUSG00000068417, Pnp2, purine-nucleoside phosphorylase 2, [RH, Score=321, Expect=7e-110]; ENSMUSG00000115338, Pnp, purine-nucleoside phosphorylase, [RH, Score=315, Expect=6e-108]} {Dmel: FBgn0035348, CG16758, [Score=243, Expect=2e-79]} {Celegans: WBGene00019298, K02D7.1, Purine nucleoside phosphorylase, [RH, Score=239, Expect=3e-78]} {Smed: dd_Smed_v6_786_0_1, dd_Smed_v6_786_0_1, [RH, Score=301, Expect=4e-103]} {RNA1509_18050, RNA1509_46352} {RNA1310_18366, RNA1509_18050, RNA1509_46352} {RNA1509_18050, RNA1509_46352, RNA815_14241}
48. MligTC455_49639 6233 129.85 Mlig455_022526, Mlig455_022566

Neo: -

Age: -

Region-enriched R7: 4.041/0.00000
Region-enriched R8: 2.616/0.00002

Regeneration-downregulated BL: -3.756

Regeneration-depleted BL: -3.756

 0.952 - - - - 0.952 -

Mlig455_022526 {REF} {Length: 493} {TRANSSPLICED} {RNA1509_5516} {RNA1310_67929} {RNA815_34597}

Mlig455_022566 {REF} {Length: 494} {TRANSSPLICED} {RNA1509_5516} {RNA1310_67929, RNA1509_5516} {RNA1509_5516, RNA815_34597}
49. MligTC455_03038 227 4.72 Mlig455_060778

Neo: -

Age: Down-Up-Down

Region-enriched R8: 6.261/0.00000
Region-enriched R7: 4.320/0.00011

 0.951 - - - - 0.951 - Mlig455_060778 {REF} {Length: 4155} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=27.8} {Mouse: ENSMUSG00000059854, Hydin, HYDIN, axonemal central pair apparatus protein, [Score=55.1, Expect=5e-07]} {RNA1509_16236} {RNA1310_4008} {RNA815_2550}
50. MligTC455_30730 121 2.52 Mlig455_010096

Neo: -

Age: Up-Down-Down

 CACNA1H 0.951 - - - - 0.951 - Mlig455_010096 {REF} {Length: 5627} {Pfam: Ion transport protein [PF00520.33, score=445.4]; Polycystin cation channel [PF08016.14, score=60.4]; Domain of unknown function (DUF4834) [PF16118.7, score=22.5]; FAM176 family [PF14851.8, score=20.1]} {Human: ENSG00000196557, CACNA1H, calcium voltage-gated channel subunit alpha1 H, [RH, Score=748, Expect=0.0]; ENSG00000100346, CACNA1I, calcium voltage-gated channel subunit alpha1 I, [RH, Score=734, Expect=0.0]} {Mouse: ENSMUSG00000024112, Cacna1h, calcium channel, voltage-dependent, T type, alpha 1H subunit, [Score=870, Expect=0.0]} {Dmel: FBgn0264386, Ca-alpha1T, Ca[2+]-channel protein alpha[[1]] subunit T, [RH, Score=868, Expect=0.0]} {Celegans: WBGene00000367, cca-1, Voltage-dependent T-type calcium channel subunit alpha, [RH, Score=774, Expect=0.0]} {Smed: dd_Smed_v6_14730_0_1, dd_Smed_v6_14730_0_1, [Score=1018, Expect=0.0]} {RNA1509_27261, RNA1509_28376} {RNA1310_7416.1, RNA1509_27261, RNA1509_28376} {RNA1509_27261, RNA1509_28376, RNA815_3853}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA