Data search


search
Exact
Search

Results for MligTC455_04552

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_04552 15 0.31 Mlig455_069681

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.677

Mlig455_069681 {REF} {Length: 311} {NoTransDecoderORF} {RNA1509_12879} {RNA1310_633} {RNA815_23891.1}

Cumulative graph for MligTC455_04552

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.505 0.915 0.99952 1.00000
RegionR2 -1.187 0.915 0.99971 1.00000
RegionR3 0.826 0.915 0.41071 0.93663
RegionR4 2.524 0.915 0.15324 0.40540
RegionR5 0.063 0.915 0.65940 1.00000
RegionR6 0.482 0.915 0.51525 1.00000
RegionR7 -1.541 0.915 0.99954 1.00000
RegionR8 -1.67 0.915 0.99953 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.16 0.915 0.99994 1.00000
RegenerationR2 1.048 0.915 0.99992 1.00000
RegenerationR3 0.809 0.915 0.39636 0.80073
RegenerationR4 -0.243 0.915 0.93742 1.00000
RegenerationR5 1.715 0.915 0.08152 0.44306
RegenerationR6 -0.583 0.915 0.86723 1.00000
RegenerationBL -0.04 0.915 0.99979 1.00000
RegenerationTP -0.119 0.915 0.99996 1.00000


Genes with expression patterns similar to MligTC455_04552

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_04552 15 0.31 Mlig455_069681

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.677

2 1.000 - - - 1.000 - Mlig455_069681 {REF} {Length: 311} {NoTransDecoderORF} {RNA1509_12879} {RNA1310_633} {RNA815_23891.1}
2. MligTC455_04551 13 0.27 Mlig455_047551

Neo: -

Age: -

1 1.000 - - - - - Mlig455_047551 {REF} {Length: 238} {NoTransDecoderORF} {RNA1509_12879} {RNA1310_633} {RNA815_23891.1}
3. MligTC455_30694 3 0.06 Mlig455_042172

Neo: -

Age: -

VIRMA 0.984 - - - - 0.984 - Mlig455_042172 {REF} {Length: 9345} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=121.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.1]; Integrase zinc binding domain [PF17921.3, score=65.5]; Virilizer, N-terminal [PF15912.7, score=64.6]; Integrase core domain [PF00665.28, score=49.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.3]; Aspartyl protease [PF13650.8, score=25.4]} {Human: ENSG00000164944, VIRMA, vir like m6A methyltransferase associated, [Score=139, Expect=6e-32]} {Mouse: ENSMUSG00000040720, Virma, vir like m6A methyltransferase associated, [Score=144, Expect=2e-33]} {Dmel: FBgn0003977, vir, virilizer, [RH, Score=90.1, Expect=3e-17]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=441, Expect=3e-131]} {RNA1509_2811, RNA1509_55457} {RNA1310_704.2, RNA1509_55457} {RNA1509_55457, RNA815_993.1}
4. MligTC455_00259 2 0.05 Mlig455_043126

Neo: -

Age: -

0.982 - - - - 0.982 - Mlig455_043126 {REF} {Length: 373} {NoTransDecoderORF}
5. MligTC455_10122 57 1.19 Mlig455_038355

Neo: -

Age: -

SIK3 0.976 - - - - 0.976 - Mlig455_038355 {REF} {Length: 5615} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=228.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=119.7]; Kinase-like [PF14531.8, score=27.2]; Phosphotransferase enzyme family [PF01636.25, score=19.0]} {Human: ENSG00000160584, SIK3, SIK family kinase 3, [Score=324, Expect=1e-94]; ENSG00000170145, SIK2, salt inducible kinase 2, [Score=320, Expect=1e-95]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=311, Expect=4e-94]} {Mouse: ENSMUSG00000034135, Sik3, SIK family kinase 3, [Score=325, Expect=3e-95]; ENSMUSG00000037112, Sik2, salt inducible kinase 2, [Score=323, Expect=1e-96]; ENSMUSG00000024042, Sik1, salt inducible kinase 1, [Score=311, Expect=7e-94]} {Dmel: FBgn0025625, Sik2, Salt-inducible kinase 2, [Score=326, Expect=2e-95]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=293, Expect=2e-85]} {Smed: dd_Smed_v6_8348_0_2, dd_Smed_v6_8348_0_2, [RH, Score=376, Expect=1e-113]} {RNA1509_14551} {RNA1310_21972.1} {RNA815_29595}
6. MligTC455_42293 28 0.59 Mlig455_053679

Neo: -

Age: -

PIP5K1A 0.975 - - - - 0.975 - Mlig455_053679 {REF} {Length: 4383} {TRANSSPLICED} {Pfam: Phosphatidylinositol-4-phosphate 5-Kinase [PF01504.20, score=268.6]} {Human: ENSG00000143398, PIP5K1A, phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, [RH, Score=416, Expect=1e-140]} {Mouse: ENSMUSG00000034902, Pip5k1c, phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma, [RH, Score=409, Expect=2e-136]; ENSMUSG00000024867, Pip5k1b, phosphatidylinositol-4-phosphate 5-kinase, type 1 beta, [RH, Score=404, Expect=7e-136]} {Dmel: FBgn0016984, sktl, skittles, [Score=434, Expect=2e-144]} {Celegans: WBGene00004087, ppk-1, PIP Kinase, [Score=409, Expect=6e-137]} {Smed: dd_Smed_v6_7632_0_3, dd_Smed_v6_7632_0_3, [Score=419, Expect=4e-142]} {RNA1509_47422} {RNA1310_16235.2, RNA1509_47422} {RNA1509_47422, RNA815_4999.1}
7. MligTC455_07568 59 1.24 Mlig455_050176

Neo: -

Age: -

Region-enriched R4: 5.685/0.01793

0.973 - - - - 0.973 - Mlig455_050176 {REF} {Length: 797} {RNA1509_50562} {RNA1310_122277}
8. MligTC455_26099 48 1 Mlig455_009302, Mlig455_009311

Neo: -

Age: -

0.97 - - - - 0.970 -

Mlig455_009302 {REF} {Length: 1235} {RNA1509_41127} {RNA1310_52145.2} {RNA815_42871}

Mlig455_009311 {REF} {Length: 1018} {RNA1509_41127} {RNA1310_52145.2} {RNA815_42871}
9. MligTC455_20392 28 0.59 Mlig455_020400

Neo: -

Age: -

0.963 - - - - 0.963 - Mlig455_020400 {REF} {Length: 1475} {Pfam: Homeodomain-like domain [PF13384.8, score=25.9]; Helix-turn-helix domain [PF13518.8, score=24.2]} {RNA1509_28798} {RNA1310_89189} {RNA815_14917.2}
10. MligTC455_41474 104 2.16 Mlig455_014812

Neo: -

Age: -

DNAJC27 0.959 - - - - 0.959 - Mlig455_014812 {REF} {Length: 5391} {Pfam: Ras family [PF00071.24, score=116.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=58.4]; ADP-ribosylation factor family [PF00025.23, score=41.9]; 50S ribosome-binding GTPase [PF01926.25, score=24.5]; CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=20.3]} {Human: ENSG00000115137, DNAJC27, DnaJ heat shock protein family (Hsp40) member C27, [Score=110, Expect=5e-29]} {Mouse: ENSMUSG00000020657, Dnajc27, DnaJ heat shock protein family (Hsp40) member C27, [Score=110, Expect=3e-29]; ENSMUSG00000027935, Rab13, RAB13, member RAS oncogene family, [Score=108, Expect=4e-29]} {Dmel: FBgn0029959, Rab39, [Score=98.2, Expect=3e-25]} {Celegans: WBGene00004279, rab-21, RAB family, [Score=93.6, Expect=1e-23]} {Smed: dd_Smed_v6_1573_0_1, dd_Smed_v6_1573_0_1, [Score=112, Expect=5e-31]} {RNA1509_34577} {RNA1310_27449.1, RNA1509_34577} {RNA1509_34577, RNA815_21008}
11. MligTC455_09017 12 0.24 Mlig455_014487, Mlig455_014508

Neo: -

Age: -

FYN 0.958 - - - - 0.958 -

Mlig455_014487 {REF} {Length: 2444} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=301.6]; Protein kinase domain [PF00069.27, score=148.1]; SH2 domain [PF00017.26, score=77.9]; Variant SH3 domain [PF14604.8, score=40.1]; SH3 domain [PF00018.30, score=37.3]; Variant SH3 domain [PF07653.19, score=28.1]; Haspin like kinase domain [PF12330.10, score=24.7]; ABC1 atypical kinase-like domain [PF03109.18, score=20.9]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.9]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [RH, Score=525, Expect=5e-180]; ENSG00000197122, SRC, SRC proto-oncogene, non-receptor tyrosine kinase, [RH, Score=499, Expect=8e-170]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [RH, Score=526, Expect=1e-180]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=488, Expect=3e-166]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [RH, Score=482, Expect=1e-163]} {Smed: dd_Smed_v6_6272_0_1, dd_Smed_v6_6272_0_1, [RH, Score=532, Expect=0.0]} {RNA1509_36919} {RNA1310_10880} {RNA815_32391}

Mlig455_014508 {REF} {Length: 2263} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=301.9]; Protein kinase domain [PF00069.27, score=148.2]; SH2 domain [PF00017.26, score=76.1]; Variant SH3 domain [PF14604.8, score=40.2]; SH3 domain [PF00018.30, score=37.5]; Variant SH3 domain [PF07653.19, score=28.4]; Haspin like kinase domain [PF12330.10, score=22.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.6]; ABC1 atypical kinase-like domain [PF03109.18, score=21.2]} {Human: ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [RH, Score=523, Expect=0.0]} {Mouse: ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [RH, Score=524, Expect=0.0]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=490, Expect=8e-169]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [RH, Score=479, Expect=1e-164]} {Smed: dd_Smed_v6_6272_0_1, dd_Smed_v6_6272_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_36919} {RNA1310_10880} {RNA815_46373}
12. MligTC455_45985 33 0.68 Mlig455_024368

Neo: -

Age: -

CDC42SE2 0.958 - - - - 0.958 - Mlig455_024368 {REF} {Length: 4034} {TRANSSPLICED} {Pfam: P21-Rho-binding domain [PF00786.30, score=20.1]} {Human: ENSG00000158985, CDC42SE2, CDC42 small effector 2, [Score=42.7, Expect=1e-05]} {Mouse: ENSMUSG00000052298, Cdc42se2, CDC42 small effector 2, [Score=42.7, Expect=9e-06]; ENSMUSG00000046722, Cdc42se1, CDC42 small effector 1, [Score=42.4, Expect=1e-05]} {RNA1509_27868} {RNA1310_38537} {RNA815_37956}
13. MligTC455_17658 8 0.17 Mlig455_070903

Neo: -

Age: -

PRSS8 0.955 - - - - 0.955 - Mlig455_070903 {REF} {Length: 3042} {Pfam: Trypsin [PF00089.28, score=191.2]; Domain of unknown function (DUF1986) [PF09342.13, score=27.2]} {Human: ENSG00000052344, PRSS8, serine protease 8, [Score=157, Expect=2e-44]; ENSG00000088926, F11, coagulation factor XI, [Score=156, Expect=2e-42]; ENSG00000237412, PRSS56, serine protease 56, [Score=153, Expect=5e-41]; ENSG00000122194, PLG, plasminogen, [Score=150, Expect=1e-39]; ENSG00000160183, TMPRSS3, transmembrane serine protease 3, [Score=150, Expect=5e-41]} {Mouse: ENSMUSG00000059481, Plg, plasminogen, [Score=160, Expect=4e-43]; ENSMUSG00000024124, Prss30, protease, serine 30, [Score=154, Expect=9e-44]; ENSMUSG00000030800, Prss8, protease, serine 8 (prostasin), [Score=153, Expect=3e-43]; ENSMUSG00000024034, Tmprss3, transmembrane protease, serine 3, [Score=152, Expect=6e-42]} {Dmel: FBgn0031619, CG3355, [RH, Score=157, Expect=4e-45]} {Celegans: WBGene00006619, try-1, TRYpsin-like protease, [Score=130, Expect=3e-35]} {Smed: dd_Smed_v6_1427_0_1, dd_Smed_v6_1427_0_1, [RH, Score=188, Expect=1e-56]} {RNA1509_32263, RNA1509_41353} {RNA1310_26531.1, RNA1509_32263, RNA1509_41353} {RNA1509_32263, RNA1509_41353, RNA815_14174}
14. MligTC455_00820 5 0.11 Mlig455_066101

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_066101 {REF} {Length: 166} {NoTransDecoderORF} {RNA1310_45089}
15. MligTC455_34822 27 0.56 Mlig455_041526

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_041526 {REF} {Length: 3806} {NoTransDecoderORF} {RNA1509_49844} {RNA1310_100437} {RNA815_25765}
16. MligTC455_24931 5 0.1 Mlig455_041049

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-1.382

0.952 - - - - 0.952 - Mlig455_041049 {REF} {Length: 2557} {NoTransDecoderORF} {RNA1509_32517} {RNA1310_34830.1} {RNA815_18494}
17. MligTC455_39621 17 0.36 Mlig455_061228

Neo: Irradiation

Age: -

NRDE2 0.95 - - - - 0.950 - Mlig455_061228 {REF} {Length: 5166} {TRANSSPLICED} {Pfam: NRDE-2, necessary for RNA interference [PF08424.12, score=139.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=39.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=37.8]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=35.1]; RING-type zinc-finger [PF13445.8, score=34.1]; Ring finger domain [PF13639.8, score=34.1]; Prokaryotic RING finger family 4 [PF14447.8, score=24.6]; zinc-RING finger domain [PF14634.8, score=23.9]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.3]; RING-H2 zinc finger domain [PF12678.9, score=20.8]; U-box domain [PF04564.17, score=19.3]; zinc RING finger of MSL2 [PF16685.7, score=18.9]} {Human: ENSG00000119720, NRDE2, NRDE-2, necessary for RNA interference, domain containing, [RH, Score=134, Expect=1e-30]} {Mouse: ENSMUSG00000021179, Nrde2, nrde-2 necessary for RNA interference, domain containing, [RH, Score=124, Expect=8e-28]} {Dmel: FBgn0265356, tn, thin, [Score=55.8, Expect=3e-07]} {Smed: dd_Smed_v6_12142_0_1, dd_Smed_v6_12142_0_1, [RH, Score=102, Expect=2e-21]} {RNA1509_20291, RNA1509_37760} {RNA1310_3668.1, RNA1509_20291, RNA1509_37760} {RNA1509_20291, RNA1509_37760, RNA815_2487.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA